RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 SF1Q15637 639 aaKnown RBP14.29□□□□□ -0.12
HDAC4-204ENST00000446876 CYP2A13Q16696 494 aa14.29□□□□□ -0.12
HDAC4-204ENST00000446876 FAM45BPQ6NSW5 357 aa14.29□□□□□ -0.12
HDAC4-204ENST00000446876 UGT3A1Q6NUS8 523 aa14.29□□□□□ -0.12
HDAC4-204ENST00000446876 SUSD1Q6UWL2 747 aa14.29□□□□□ -0.12
HDAC4-204ENST00000446876 UBE2R2Q712K3 238 aaPredicted RBP14.29□□□□□ -0.12
HDAC4-204ENST00000446876 ZC3HC1Q86WB0 502 aaKnown RBP14.29□□□□□ -0.12
HDAC4-204ENST00000446876 RAB42Q8N4Z0 105 aa14.29□□□□□ -0.12
HDAC4-204ENST00000446876 ESX1Q8N693 406 aa14.29□□□□□ -0.12
HDAC4-204ENST00000446876 SLC38A9Q8NBW4 561 aa14.29□□□□□ -0.12
HDAC4-204ENST00000446876 PPFIBP2Q8ND30 876 aa14.29□□□□□ -0.12
HDAC4-204ENST00000446876 FAM45AQ8TCE6 357 aa14.29□□□□□ -0.12
HDAC4-204ENST00000446876 ASB11Q8WXH4 323 aa14.29□□□□□ -0.12
HDAC4-204ENST00000446876 DLG3Q92796 817 aa14.29□□□□□ -0.12
HDAC4-204ENST00000446876 LINGO1Q96FE5 620 aa14.29□□□□□ -0.12
HDAC4-204ENST00000446876 MIPEPQ99797 713 aa14.29□□□□□ -0.12
HDAC4-204ENST00000446876 GPN2Q9H9Y4 310 aaPredicted RBP14.29□□□□□ -0.12
HDAC4-204ENST00000446876 FANCEQ9HB96 536 aa14.29□□□□□ -0.12
HDAC4-204ENST00000446876 FAM114A2Q9NRY5 505 aa14.29□□□□□ -0.12
HDAC4-204ENST00000446876 ZDHHC18Q9NUE0 388 aa14.29□□□□□ -0.12
HDAC4-204ENST00000446876 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.29□□□□□ -0.12
HDAC4-204ENST00000446876 IL17BQ9UHF5 180 aa14.29□□□□□ -0.12
HDAC4-204ENST00000446876 DMGDHQ9UI17 866 aaKnown RBP14.29□□□□□ -0.12
HDAC4-204ENST00000446876 MRPS18BQ9Y676 258 aaKnown RBP14.29□□□□□ -0.12
HDAC4-204ENST00000446876 CHD6Q8TD26 2715 aa14.28□□□□□ -0.12
HDAC4-204ENST00000446876 FAM95CA0A1B0GW59 222 aa14.28□□□□□ -0.12
HDAC4-204ENST00000446876 TCRBV9S1A1TA0A576 114 aa14.28□□□□□ -0.12
HDAC4-204ENST00000446876 CTAGE15A4D2H0 777 aa14.28□□□□□ -0.12
HDAC4-204ENST00000446876 GFYI3L273 518 aa14.28□□□□□ -0.12
HDAC4-204ENST00000446876 MAP3K7O43318 606 aa14.28□□□□□ -0.12
HDAC4-204ENST00000446876 TSPAN12O95859 305 aa14.28□□□□□ -0.12
HDAC4-204ENST00000446876 TUBB4AP04350 444 aa14.28□□□□□ -0.12
HDAC4-204ENST00000446876 CTAGE8P0CG41 777 aa14.28□□□□□ -0.12
HDAC4-204ENST00000446876 ERGP11308 486 aa14.28□□□□□ -0.12
HDAC4-204ENST00000446876 F8A1P23610 371 aa14.28□□□□□ -0.12
HDAC4-204ENST00000446876 OAS2P29728 719 aaKnown RBP14.28□□□□□ -0.12
HDAC4-204ENST00000446876 MAGEA4P43358 317 aa14.28□□□□□ -0.12
HDAC4-204ENST00000446876 ABHD18Q0P651 414 aa14.28□□□□□ -0.12
HDAC4-204ENST00000446876 GPS2Q13227 327 aa14.28□□□□□ -0.12
HDAC4-204ENST00000446876 PDAP1Q13442 181 aaKnown RBP14.28□□□□□ -0.12
HDAC4-204ENST00000446876 MAP7Q14244 749 aa14.28□□□□□ -0.12
HDAC4-204ENST00000446876 ZNF460Q14592 562 aa14.28□□□□□ -0.12
HDAC4-204ENST00000446876 FAM208BQ5VWN6 2430 aa14.28□□□□□ -0.12
HDAC4-204ENST00000446876 FCRL6Q6DN72 434 aa14.28□□□□□ -0.12
HDAC4-204ENST00000446876 MBOAT1Q6ZNC8 495 aa14.28□□□□□ -0.12
HDAC4-204ENST00000446876 CTAGE6Q86UF2 777 aa14.28□□□□□ -0.12
HDAC4-204ENST00000446876 BPHLQ86WA6 291 aaPredicted RBP14.28□□□□□ -0.12
HDAC4-204ENST00000446876 SLC26A11Q86WA9 606 aa14.28□□□□□ -0.12
HDAC4-204ENST00000446876 CTAGE4Q8IX94 777 aa14.28□□□□□ -0.12
HDAC4-204ENST00000446876 MNS1Q8NEH6 495 aa14.28□□□□□ -0.12
HDAC4-204ENST00000446876 HMGCLL1Q8TB92 370 aa14.28□□□□□ -0.12
HDAC4-204ENST00000446876 SEC14L1Q92503 715 aa14.28□□□□□ -0.12
HDAC4-204ENST00000446876 TCTN2Q96GX1 697 aa14.28□□□□□ -0.12
HDAC4-204ENST00000446876 RUFY1Q96T51 708 aa14.28□□□□□ -0.12
HDAC4-204ENST00000446876 ACAT2Q9BWD1 397 aa14.28□□□□□ -0.12
HDAC4-204ENST00000446876 SPRTNQ9H040 489 aaPredicted RBP14.28□□□□□ -0.12
HDAC4-204ENST00000446876 ABCF3Q9NUQ8 709 aa14.28□□□□□ -0.12
HDAC4-204ENST00000446876 CROTQ9UKG9 612 aa14.28□□□□□ -0.12
HDAC4-204ENST00000446876 CORO1CQ9ULV4 474 aaPredicted RBP14.28□□□□□ -0.12
HDAC4-204ENST00000446876 VWA7Q9Y334 891 aa14.28□□□□□ -0.12
HDAC4-204ENST00000446876 MGAQ8IWI9 3026 aa14.28□□□□□ -0.12
HDAC4-204ENST00000446876 HEATR5BQ9P2D3 2071 aa14.27□□□□□ -0.12
HDAC4-204ENST00000446876 EIF3FO00303 357 aaPredicted RBP14.27□□□□□ -0.13
HDAC4-204ENST00000446876 CPNE3O75131 537 aaKnown RBP14.27□□□□□ -0.13
HDAC4-204ENST00000446876 SLC16A8O95907 504 aa14.27□□□□□ -0.13
HDAC4-204ENST00000446876 C1QAP02745 245 aa14.27□□□□□ -0.13
HDAC4-204ENST00000446876 ATXN8OSP0DMR3 200 aa14.27□□□□□ -0.13
HDAC4-204ENST00000446876 CYP2A7P20853 494 aa14.27□□□□□ -0.13
HDAC4-204ENST00000446876 DLSTP36957 453 aa14.27□□□□□ -0.13
HDAC4-204ENST00000446876 GRIA3P42263 894 aa14.27□□□□□ -0.13
HDAC4-204ENST00000446876 SKIV2L2P42285 1042 aaKnown RBP14.27□□□□□ -0.13
HDAC4-204ENST00000446876 RGS4P49798 205 aa14.27□□□□□ -0.13
HDAC4-204ENST00000446876 PNLIPRP1P54315 467 aa14.27□□□□□ -0.13
HDAC4-204ENST00000446876 ITGA1P56199 1179 aa14.27□□□□□ -0.13
HDAC4-204ENST00000446876 EFTUD2Q15029 972 aaKnown RBP eCLIP14.27□□□□□ -0.133e-6■■■■□ 23.5
HDAC4-204ENST00000446876 UBAP2Q5T6F2 1119 aaKnown RBP14.27□□□□□ -0.13
HDAC4-204ENST00000446876 FAM199XQ6PEV8 388 aaPredicted RBP14.27□□□□□ -0.13
HDAC4-204ENST00000446876 FIGLAQ6QHK4 219 aa14.27□□□□□ -0.13
HDAC4-204ENST00000446876 TMEM207Q6UWW9 146 aa14.27□□□□□ -0.13
HDAC4-204ENST00000446876 C3orf62Q6ZUJ4 267 aa14.27□□□□□ -0.13
HDAC4-204ENST00000446876 MYO1HQ8N1T3 1032 aa14.27□□□□□ -0.13
HDAC4-204ENST00000446876 DNAJC22Q8N4W6 341 aa14.27□□□□□ -0.13
HDAC4-204ENST00000446876 FBXO15Q8NCQ5 510 aaPredicted RBP14.27□□□□□ -0.13
HDAC4-204ENST00000446876 OR2L3Q8NG85 312 aa14.27□□□□□ -0.13
HDAC4-204ENST00000446876 OR2A1Q8NGT9 310 aa14.27□□□□□ -0.13
HDAC4-204ENST00000446876 OR8K5Q8NH50 307 aa14.27□□□□□ -0.13
HDAC4-204ENST00000446876 CT55Q8WUE5 264 aa14.27□□□□□ -0.13
HDAC4-204ENST00000446876 ZNF480Q8WV37 535 aa14.27□□□□□ -0.13
HDAC4-204ENST00000446876 SNRNP27Q8WVK2 155 aaKnown RBP14.27□□□□□ -0.13
HDAC4-204ENST00000446876 N4BP2L2Q92802 583 aaPredicted RBP14.27□□□□□ -0.13
HDAC4-204ENST00000446876 KIAA1143Q96AT1 154 aaPredicted RBP14.27□□□□□ -0.13
HDAC4-204ENST00000446876 SLC22A18Q96BI1 424 aa14.27□□□□□ -0.13
HDAC4-204ENST00000446876 VPS39Q96JC1 886 aa14.27□□□□□ -0.13
HDAC4-204ENST00000446876 BBC3Q96PG8 261 aaPredicted RBP14.27□□□□□ -0.13
HDAC4-204ENST00000446876 FCRL4Q96PJ5 515 aa14.27□□□□□ -0.13
HDAC4-204ENST00000446876 MCMBPQ9BTE3 642 aa14.27□□□□□ -0.13
HDAC4-204ENST00000446876 PHACTR1Q9C0D0 580 aa14.27□□□□□ -0.13
HDAC4-204ENST00000446876 LRRC4CQ9HCJ2 640 aa14.27□□□□□ -0.13
HDAC4-204ENST00000446876 SLC6A20Q9NP91 592 aa14.27□□□□□ -0.13
HDAC4-204ENST00000446876 LHX9Q9NQ69 397 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms