RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 HSD17B2P37059 387 aa17.94■□□□□ 0.46
CCDC188-202ENST00000444532 GABRA4P48169 554 aa17.94■□□□□ 0.46
CCDC188-202ENST00000444532 MRPS25P82663 173 aaKnown RBP17.94■□□□□ 0.46
CCDC188-202ENST00000444532 DNASE1L3Q13609 305 aa17.94■□□□□ 0.46
CCDC188-202ENST00000444532 CUL1Q13616 776 aa17.94■□□□□ 0.46
CCDC188-202ENST00000444532 ARHGAP19Q14CB8 494 aa17.94■□□□□ 0.46
CCDC188-202ENST00000444532 TBR1Q16650 682 aa17.94■□□□□ 0.46
CCDC188-202ENST00000444532 LINC00303Q3SY05 128 aa17.94■□□□□ 0.46
CCDC188-202ENST00000444532 DUPD1Q68J44 220 aa17.94■□□□□ 0.46
CCDC188-202ENST00000444532 LRRC8EQ6NSJ5 796 aa17.94■□□□□ 0.46
CCDC188-202ENST00000444532 CYHR1Q6ZMK1 362 aa17.94■□□□□ 0.46
CCDC188-202ENST00000444532 ZNF517Q6ZMY9 492 aaPredicted RBP17.94■□□□□ 0.46
CCDC188-202ENST00000444532 TAX1BP1Q86VP1 789 aa17.94■□□□□ 0.46
CCDC188-202ENST00000444532 ANKMY2Q8IV38 441 aa17.94■□□□□ 0.46
CCDC188-202ENST00000444532 DSELQ8IZU8 1212 aa17.94■□□□□ 0.46
CCDC188-202ENST00000444532 FBXO36Q8NEA4 188 aa17.94■□□□□ 0.46
CCDC188-202ENST00000444532 CT55Q8WUE5 264 aa17.94■□□□□ 0.46
CCDC188-202ENST00000444532 EXTL1Q92935 676 aa17.94■□□□□ 0.46
CCDC188-202ENST00000444532 ZUFSPQ96AP4 578 aa17.94■□□□□ 0.46
CCDC188-202ENST00000444532 CLIP3Q96DZ5 547 aa17.94■□□□□ 0.46
CCDC188-202ENST00000444532 ARHGAP9Q9BRR9 750 aa17.94■□□□□ 0.46
CCDC188-202ENST00000444532 ACTR5Q9H9F9 607 aaPredicted RBP17.94■□□□□ 0.46
CCDC188-202ENST00000444532 TRMT6Q9UJA5 497 aaKnown RBP17.94■□□□□ 0.46
CCDC188-202ENST00000444532 CORO1CQ9ULV4 474 aaPredicted RBP17.94■□□□□ 0.46
CCDC188-202ENST00000444532 PLCL2Q9UPR0 1127 aa17.94■□□□□ 0.46
CCDC188-202ENST00000444532 UTP11Q9Y3A2 253 aaKnown RBP17.94■□□□□ 0.46
CCDC188-202ENST00000444532 AP1M2Q9Y6Q5 423 aa17.94■□□□□ 0.46
CCDC188-202ENST00000444532 PCM1Q15154 2024 aa17.93■□□□□ 0.46
CCDC188-202ENST00000444532 ZNF839A8K0R7 811 aa17.93■□□□□ 0.46
CCDC188-202ENST00000444532 TARM1B6A8C7 271 aa17.93■□□□□ 0.46
CCDC188-202ENST00000444532 MEN1O00255 615 aa17.93■□□□□ 0.46
CCDC188-202ENST00000444532 ZBTB14O43829 449 aa17.93■□□□□ 0.46
CCDC188-202ENST00000444532 KATNA1O75449 491 aa17.93■□□□□ 0.46
CCDC188-202ENST00000444532 OR2B3O76000 313 aa17.93■□□□□ 0.46
CCDC188-202ENST00000444532 CDC20Q12834 499 aa17.93■□□□□ 0.46
CCDC188-202ENST00000444532 GPS2Q13227 327 aa17.93■□□□□ 0.46
CCDC188-202ENST00000444532 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.93■□□□□ 0.46
CCDC188-202ENST00000444532 PRAMEF17Q5VTA0 474 aa17.93■□□□□ 0.46
CCDC188-202ENST00000444532 FAM199XQ6PEV8 388 aaPredicted RBP17.93■□□□□ 0.46
CCDC188-202ENST00000444532 TRMT10BQ6PF06 316 aaKnown RBP17.93■□□□□ 0.46
CCDC188-202ENST00000444532 FIGLAQ6QHK4 219 aa17.93■□□□□ 0.46
CCDC188-202ENST00000444532 FAM20CQ8IXL6 584 aa17.93■□□□□ 0.46
CCDC188-202ENST00000444532 MR1Q95460 341 aa17.93■□□□□ 0.46
CCDC188-202ENST00000444532 C16orf45Q96MC5 204 aaPredicted RBP17.93■□□□□ 0.46
CCDC188-202ENST00000444532 NDNQ99608 321 aa17.93■□□□□ 0.46
CCDC188-202ENST00000444532 DPH2Q9BQC3 489 aaPredicted RBP17.93■□□□□ 0.46
CCDC188-202ENST00000444532 SLC7A5P2Q9GIP4 190 aa17.93■□□□□ 0.46
CCDC188-202ENST00000444532 RAB17Q9H0T7 212 aa17.93■□□□□ 0.46
CCDC188-202ENST00000444532 DPH5Q9H2P9 285 aa17.93■□□□□ 0.46
CCDC188-202ENST00000444532 AKIRIN1Q9H9L7 192 aaPredicted RBP17.93■□□□□ 0.46
CCDC188-202ENST00000444532 KLK4Q9Y5K2 254 aa17.93■□□□□ 0.46
CCDC188-202ENST00000444532 MRPS18BQ9Y676 258 aaKnown RBP17.93■□□□□ 0.46
CCDC188-202ENST00000444532 SPTBP11277 2137 aa17.92■□□□□ 0.46
CCDC188-202ENST00000444532 KRT87PA6NCN2 255 aa17.92■□□□□ 0.46
CCDC188-202ENST00000444532 H3BMH7 237 aa17.92■□□□□ 0.46
CCDC188-202ENST00000444532 EIF3HO15372 352 aaKnown RBP eCLIP17.92■□□□□ 0.46
CCDC188-202ENST00000444532 ZNF749O43361 778 aa17.92■□□□□ 0.46
CCDC188-202ENST00000444532 HCRTR1O43613 425 aa17.92■□□□□ 0.46
CCDC188-202ENST00000444532 RORAP35398 523 aa17.92■□□□□ 0.46
CCDC188-202ENST00000444532 RGS4P49798 205 aa17.92■□□□□ 0.46
CCDC188-202ENST00000444532 RPS15P62841 145 aaKnown RBP17.92■□□□□ 0.46
CCDC188-202ENST00000444532 TIAL1Q01085 375 aaKnown RBP eCLIP17.92■□□□□ 0.46
CCDC188-202ENST00000444532 CAV1Q03135 178 aa17.92■□□□□ 0.46
CCDC188-202ENST00000444532 CKAP4Q07065 602 aaKnown RBP17.92■□□□□ 0.46
CCDC188-202ENST00000444532 MGAT5Q09328 741 aa17.92■□□□□ 0.46
CCDC188-202ENST00000444532 ZC3H12BQ5HYM0 836 aaKnown RBP17.92■□□□□ 0.46
CCDC188-202ENST00000444532 TLDC1Q6P9B6 456 aa17.92■□□□□ 0.46
CCDC188-202ENST00000444532 BORAQ6PGQ7 559 aa17.92■□□□□ 0.46
CCDC188-202ENST00000444532 CPNE9Q8IYJ1 553 aa17.92■□□□□ 0.46
CCDC188-202ENST00000444532 ZBED8Q8IZ13 594 aa17.92■□□□□ 0.46
CCDC188-202ENST00000444532 OR2A1Q8NGT9 310 aa17.92■□□□□ 0.46
CCDC188-202ENST00000444532 SMPDL3AQ92484 453 aa17.92■□□□□ 0.46
CCDC188-202ENST00000444532 SEC14L1Q92503 715 aa17.92■□□□□ 0.46
CCDC188-202ENST00000444532 MED8Q96G25 268 aa17.92■□□□□ 0.46
CCDC188-202ENST00000444532 MOCS1Q9NZB8 636 aa17.92■□□□□ 0.46
CCDC188-202ENST00000444532 CDC23Q9UJX2 597 aa17.92■□□□□ 0.46
CCDC188-202ENST00000444532 A0A1W2PPV9 198 aa17.91■□□□□ 0.46
CCDC188-202ENST00000444532 CREG1O75629 220 aa17.91■□□□□ 0.46
CCDC188-202ENST00000444532 RAB40ALP0C0E4 278 aa17.91■□□□□ 0.46
CCDC188-202ENST00000444532 PRKAR1AP10644 381 aa17.91■□□□□ 0.46
CCDC188-202ENST00000444532 MCM3P25205 808 aa17.91■□□□□ 0.46
CCDC188-202ENST00000444532 PTPN4P29074 926 aa17.91■□□□□ 0.46
CCDC188-202ENST00000444532 CDKN2DP55273 166 aa17.91■□□□□ 0.46
CCDC188-202ENST00000444532 LY6DQ14210 128 aa17.91■□□□□ 0.46
CCDC188-202ENST00000444532 NAA25Q14CX7 972 aa17.91■□□□□ 0.46
CCDC188-202ENST00000444532 FASTKD3Q14CZ7 662 aaKnown RBP17.91■□□□□ 0.46
CCDC188-202ENST00000444532 DEFB110Q30KQ9 67 aa17.91■□□□□ 0.46
CCDC188-202ENST00000444532 RBM20Q5T481 1227 aaKnown RBP17.91■□□□□ 0.46
CCDC188-202ENST00000444532 FCRL6Q6DN72 434 aa17.91■□□□□ 0.46
CCDC188-202ENST00000444532 MCATQ8IVS2 390 aaKnown RBP17.91■□□□□ 0.46
CCDC188-202ENST00000444532 OR2L3Q8NG85 312 aa17.91■□□□□ 0.46
CCDC188-202ENST00000444532 PYROXD1Q8WU10 500 aa17.91■□□□□ 0.46
CCDC188-202ENST00000444532 EEF1AKMT1Q8WVE0 214 aa17.91■□□□□ 0.46
CCDC188-202ENST00000444532 PKP4Q99569 1192 aa17.91■□□□□ 0.46
CCDC188-202ENST00000444532 SPRTNQ9H040 489 aaPredicted RBP17.91■□□□□ 0.46
CCDC188-202ENST00000444532 PCMTD2Q9NV79 361 aa17.91■□□□□ 0.46
CCDC188-202ENST00000444532 EURLQ9NYK6 297 aa17.91■□□□□ 0.46
CCDC188-202ENST00000444532 GRHL1Q9NZI5 618 aa17.91■□□□□ 0.46
CCDC188-202ENST00000444532 ZFATQ9P243 1243 aa17.91■□□□□ 0.46
CCDC188-202ENST00000444532 FARSAQ9Y285 508 aaKnown RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms