RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 SF1Q15637 639 aaKnown RBP16.84■□□□□ 0.29
SMARCAL1-209ENST00000444508 GRTP1Q5TC63 336 aa16.84■□□□□ 0.29
SMARCAL1-209ENST00000444508 NKAPQ8N5F7 415 aaKnown RBP16.84■□□□□ 0.29
SMARCAL1-209ENST00000444508 HNRNPLLQ8WVV9 542 aaKnown RBP16.84■□□□□ 0.29
SMARCAL1-209ENST00000444508 SMPDL3AQ92484 453 aa16.84■□□□□ 0.29
SMARCAL1-209ENST00000444508 CYTH2Q99418 400 aa16.84■□□□□ 0.29
SMARCAL1-209ENST00000444508 MCMBPQ9BTE3 642 aa16.84■□□□□ 0.29
SMARCAL1-209ENST00000444508 ULBP3Q9BZM4 244 aa16.84■□□□□ 0.29
SMARCAL1-209ENST00000444508 POPDC3Q9HBV1 291 aa16.84■□□□□ 0.29
SMARCAL1-209ENST00000444508 SYTL2Q9HCH5 934 aa16.84■□□□□ 0.29
SMARCAL1-209ENST00000444508 NFU1Q9UMS0 254 aa16.84■□□□□ 0.29
SMARCAL1-209ENST00000444508 CELSR3Q9NYQ7 3312 aa16.84■□□□□ 0.29
SMARCAL1-209ENST00000444508 SDK2Q58EX2 2172 aa16.84■□□□□ 0.29
SMARCAL1-209ENST00000444508 LAMA5O15230 3695 aa16.83■□□□□ 0.29
SMARCAL1-209ENST00000444508 STK17BO94768 372 aa16.83■□□□□ 0.28
SMARCAL1-209ENST00000444508 TSPAN12O95859 305 aa16.83■□□□□ 0.28
SMARCAL1-209ENST00000444508 C1QAP02745 245 aa16.83■□□□□ 0.28
SMARCAL1-209ENST00000444508 HIST1H2AGP0C0S8 130 aaPredicted RBP16.83■□□□□ 0.28
SMARCAL1-209ENST00000444508 ERGP11308 486 aa16.83■□□□□ 0.28
SMARCAL1-209ENST00000444508 ZNF37AP17032 561 aaPredicted RBP16.83■□□□□ 0.28
SMARCAL1-209ENST00000444508 HIST1H2ADP20671 130 aa16.83■□□□□ 0.28
SMARCAL1-209ENST00000444508 ITPKBP27987 946 aa16.83■□□□□ 0.28
SMARCAL1-209ENST00000444508 PGGT1BP53609 377 aa16.83■□□□□ 0.28
SMARCAL1-209ENST00000444508 UCNP55089 124 aa16.83■□□□□ 0.28
SMARCAL1-209ENST00000444508 TLE3Q04726 772 aa16.83■□□□□ 0.28
SMARCAL1-209ENST00000444508 TSTA3Q13630 321 aaPredicted RBP16.83■□□□□ 0.28
SMARCAL1-209ENST00000444508 USP10Q14694 798 aaKnown RBP16.83■□□□□ 0.28
SMARCAL1-209ENST00000444508 SLMAPQ14BN4 828 aa16.83■□□□□ 0.28
SMARCAL1-209ENST00000444508 DTX1Q86Y01 620 aa16.83■□□□□ 0.28
SMARCAL1-209ENST00000444508 SYTL1Q8IYJ3 562 aa16.83■□□□□ 0.28
SMARCAL1-209ENST00000444508 N4BP2L2Q92802 583 aaPredicted RBP16.83■□□□□ 0.28
SMARCAL1-209ENST00000444508 HIST1H2AHQ96KK5 128 aa16.83■□□□□ 0.28
SMARCAL1-209ENST00000444508 FCRL4Q96PJ5 515 aa16.83■□□□□ 0.28
SMARCAL1-209ENST00000444508 HIST1H2AJQ99878 128 aa16.83■□□□□ 0.28
SMARCAL1-209ENST00000444508 H2AFJQ9BTM1 129 aa16.83■□□□□ 0.28
SMARCAL1-209ENST00000444508 SLC12A9Q9BXP2 914 aa16.83■□□□□ 0.28
SMARCAL1-209ENST00000444508 TRIM54Q9BYV2 358 aa16.83■□□□□ 0.28
SMARCAL1-209ENST00000444508 CDC42EP4Q9H3Q1 356 aaKnown RBP16.83■□□□□ 0.28
SMARCAL1-209ENST00000444508 PARVBQ9HBI1 364 aa16.83■□□□□ 0.28
SMARCAL1-209ENST00000444508 GPAMQ9HCL2 828 aa16.83■□□□□ 0.28
SMARCAL1-209ENST00000444508 ADAMTS6Q9UKP5 1117 aa16.83■□□□□ 0.28
SMARCAL1-209ENST00000444508 MTO1Q9Y2Z2 717 aaKnown RBP16.83■□□□□ 0.28
SMARCAL1-209ENST00000444508 CACNA1BQ00975 2339 aa16.82■□□□□ 0.28
SMARCAL1-209ENST00000444508 ESPNB1AK53 854 aa16.82■□□□□ 0.28
SMARCAL1-209ENST00000444508 TMEM150CB9EJG8 249 aa16.82■□□□□ 0.28
SMARCAL1-209ENST00000444508 RAD1O60671 282 aa16.82■□□□□ 0.28
SMARCAL1-209ENST00000444508 ACSL3O95573 720 aa16.82■□□□□ 0.28
SMARCAL1-209ENST00000444508 SLC16A8O95907 504 aa16.82■□□□□ 0.28
SMARCAL1-209ENST00000444508 MSL3P1P0C860 447 aa16.82■□□□□ 0.28
SMARCAL1-209ENST00000444508 MAGP20916 626 aa16.82■□□□□ 0.28
SMARCAL1-209ENST00000444508 RPA3P35244 121 aaPredicted RBP16.82■□□□□ 0.28
SMARCAL1-209ENST00000444508 FASTKQ14296 549 aaKnown RBP16.82■□□□□ 0.28
SMARCAL1-209ENST00000444508 ZNF460Q14592 562 aa16.82■□□□□ 0.28
SMARCAL1-209ENST00000444508 TGIF1Q15583 401 aa16.82■□□□□ 0.28
SMARCAL1-209ENST00000444508 TEX35Q5T0J7 233 aa16.82■□□□□ 0.28
SMARCAL1-209ENST00000444508 CDHR3Q6ZTQ4 885 aa16.82■□□□□ 0.28
SMARCAL1-209ENST00000444508 FAM20CQ8IXL6 584 aa16.82■□□□□ 0.28
SMARCAL1-209ENST00000444508 CACNA2D3Q8IZS8 1091 aa16.82■□□□□ 0.28
SMARCAL1-209ENST00000444508 NLGN4XQ8N0W4 816 aa16.82■□□□□ 0.28
SMARCAL1-209ENST00000444508 IL22RA1Q8N6P7 574 aa16.82■□□□□ 0.28
SMARCAL1-209ENST00000444508 LRRN4CLQ8ND94 238 aa16.82■□□□□ 0.28
SMARCAL1-209ENST00000444508 NLGN4YQ8NFZ3 816 aaPredicted RBP16.82■□□□□ 0.28
SMARCAL1-209ENST00000444508 ZNF480Q8WV37 535 aa16.82■□□□□ 0.28
SMARCAL1-209ENST00000444508 ZNF501Q96CX3 271 aaPredicted RBP16.82■□□□□ 0.28
SMARCAL1-209ENST00000444508 PDLIM5Q96HC4 596 aaKnown RBP16.82■□□□□ 0.28
SMARCAL1-209ENST00000444508 CCDC138Q96M89 665 aa16.82■□□□□ 0.28
SMARCAL1-209ENST00000444508 GPR22Q99680 433 aa16.82■□□□□ 0.28
SMARCAL1-209ENST00000444508 MIPEPQ99797 713 aa16.82■□□□□ 0.28
SMARCAL1-209ENST00000444508 CHRNA10Q9GZZ6 450 aa16.82■□□□□ 0.28
SMARCAL1-209ENST00000444508 PILRAQ9UKJ1 303 aa16.82■□□□□ 0.28
SMARCAL1-209ENST00000444508 PDE10AQ9Y233 779 aa16.82■□□□□ 0.28
SMARCAL1-209ENST00000444508 TMEM184BQ9Y519 407 aaPredicted RBP16.82■□□□□ 0.28
SMARCAL1-209ENST00000444508 ZFHX4Q86UP3 3567 aa16.82■□□□□ 0.28
SMARCAL1-209ENST00000444508 ITPR1Q14643 2758 aa16.82■□□□□ 0.28
SMARCAL1-209ENST00000444508 SNRNP200O75643 2136 aaKnown RBP16.81■□□□□ 0.28
SMARCAL1-209ENST00000444508 PRICKLE3O43900 615 aaPredicted RBP16.81■□□□□ 0.28
SMARCAL1-209ENST00000444508 KIAA0754O94854 1291 aa16.81■□□□□ 0.28
SMARCAL1-209ENST00000444508 STMN1P16949 149 aa16.81■□□□□ 0.28
SMARCAL1-209ENST00000444508 PSMB5P28074 263 aa16.81■□□□□ 0.28
SMARCAL1-209ENST00000444508 CMPK1P30085 196 aa16.81■□□□□ 0.28
SMARCAL1-209ENST00000444508 NAA25Q14CX7 972 aa16.81■□□□□ 0.28
SMARCAL1-209ENST00000444508 EFTUD2Q15029 972 aaKnown RBP eCLIP16.81■□□□□ 0.28
SMARCAL1-209ENST00000444508 ZIC1Q15915 447 aa16.81■□□□□ 0.28
SMARCAL1-209ENST00000444508 MANEAQ5SRI9 462 aa16.81■□□□□ 0.28
SMARCAL1-209ENST00000444508 PWWP2BQ6NUJ5 590 aa16.81■□□□□ 0.28
SMARCAL1-209ENST00000444508 C19orf48Q6RUI8 117 aa16.81■□□□□ 0.28
SMARCAL1-209ENST00000444508 TMEM207Q6UWW9 146 aa16.81■□□□□ 0.28
SMARCAL1-209ENST00000444508 TMEM126BQ8IUX1 230 aa16.81■□□□□ 0.28
SMARCAL1-209ENST00000444508 CEP97Q8IW35 865 aa16.81■□□□□ 0.28
SMARCAL1-209ENST00000444508 ESX1Q8N693 406 aa16.81■□□□□ 0.28
SMARCAL1-209ENST00000444508 DLG3Q92796 817 aa16.81■□□□□ 0.28
SMARCAL1-209ENST00000444508 NKD1Q969G9 470 aa16.81■□□□□ 0.28
SMARCAL1-209ENST00000444508 CCNL2Q96S94 520 aaPredicted RBP16.81■□□□□ 0.28
SMARCAL1-209ENST00000444508 SPRY4Q9C004 299 aa16.81■□□□□ 0.28
SMARCAL1-209ENST00000444508 ACSS3Q9H6R3 686 aa16.81■□□□□ 0.28
SMARCAL1-209ENST00000444508 CAB39LQ9H9S4 337 aa16.81■□□□□ 0.28
SMARCAL1-209ENST00000444508 SERTAD3Q9UJW9 196 aa16.81■□□□□ 0.28
SMARCAL1-209ENST00000444508 KLHL20Q9Y2M5 609 aa16.81■□□□□ 0.28
SMARCAL1-209ENST00000444508 A0A1W2PPV9 198 aa16.8■□□□□ 0.28
SMARCAL1-209ENST00000444508 E7ENX8 843 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms