RNA–Protein interactions for RNA: ENST00000444177.1

TREX1-202, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,200 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-202ENST00000444177 TP53TG5Q9Y2B4 290 aa13.52□□□□□ -0.25
TREX1-202ENST00000444177 MAN2B2Q9Y2E5 1009 aa13.52□□□□□ -0.25
TREX1-202ENST00000444177 MED13Q9UHV7 2174 aa13.51□□□□□ -0.25
TREX1-202ENST00000444177 A0A0J9YY10 115 aa13.51□□□□□ -0.25
TREX1-202ENST00000444177 TMEM150CB9EJG8 249 aa13.51□□□□□ -0.25
TREX1-202ENST00000444177 MEN1O00255 615 aa13.51□□□□□ -0.25
TREX1-202ENST00000444177 RASGRF2O14827 1237 aa13.51□□□□□ -0.25
TREX1-202ENST00000444177 RFPL1O75677 317 aa13.51□□□□□ -0.25
TREX1-202ENST00000444177 TTC4O95801 387 aa13.51□□□□□ -0.25
TREX1-202ENST00000444177 KLK3P07288 261 aaPredicted RBP13.51□□□□□ -0.25
TREX1-202ENST00000444177 ERVK-10P10266 1014 aa13.51□□□□□ -0.25
TREX1-202ENST00000444177 PEBP1P30086 187 aaKnown RBP13.51□□□□□ -0.25
TREX1-202ENST00000444177 PMS2P54278 862 aa13.51□□□□□ -0.25
TREX1-202ENST00000444177 ARL4CP56559 192 aa13.51□□□□□ -0.25
TREX1-202ENST00000444177 RPS18P62269 152 aaKnown RBP13.51□□□□□ -0.25
TREX1-202ENST00000444177 HIF1AQ16665 826 aa13.51□□□□□ -0.25
TREX1-202ENST00000444177 KYNUQ16719 465 aa13.51□□□□□ -0.25
TREX1-202ENST00000444177 UGT8Q16880 541 aa13.51□□□□□ -0.25
TREX1-202ENST00000444177 TTLL9Q3SXZ7 439 aa13.51□□□□□ -0.25
TREX1-202ENST00000444177 LCN10Q6JVE6 187 aa13.51□□□□□ -0.25
TREX1-202ENST00000444177 SYVN1Q86TM6 617 aa13.51□□□□□ -0.25
TREX1-202ENST00000444177 APLFQ8IW19 511 aaPredicted RBP13.51□□□□□ -0.25
TREX1-202ENST00000444177 RAB42Q8N4Z0 105 aa13.51□□□□□ -0.25
TREX1-202ENST00000444177 LMNTD1Q8N9Z9 388 aa13.51□□□□□ -0.25
TREX1-202ENST00000444177 LINC01555Q8NAE3 123 aa13.51□□□□□ -0.25
TREX1-202ENST00000444177 BBOF1Q8ND07 529 aa13.51□□□□□ -0.25
TREX1-202ENST00000444177 OR1L3Q8NH93 324 aa13.51□□□□□ -0.25
TREX1-202ENST00000444177 GABPB2Q8TAK5 448 aaPredicted RBP13.51□□□□□ -0.25
TREX1-202ENST00000444177 SEC14L1Q92503 715 aa13.51□□□□□ -0.25
TREX1-202ENST00000444177 N4BP2L2Q92802 583 aaPredicted RBP13.51□□□□□ -0.25
TREX1-202ENST00000444177 RAD51AP1Q96B01 352 aa13.51□□□□□ -0.25
TREX1-202ENST00000444177 LRFN5Q96NI6 719 aa13.51□□□□□ -0.25
TREX1-202ENST00000444177 RAB11FIP5Q9BXF6 653 aa13.51□□□□□ -0.25
TREX1-202ENST00000444177 CHST8Q9H2A9 424 aa13.51□□□□□ -0.25
TREX1-202ENST00000444177 SYTL2Q9HCH5 934 aa13.51□□□□□ -0.25
TREX1-202ENST00000444177 SNX24Q9Y343 169 aa13.51□□□□□ -0.25
TREX1-202ENST00000444177 DOPEY2Q9Y3R5 2298 aa13.51□□□□□ -0.25
TREX1-202ENST00000444177 COL12A1Q99715 3063 aa13.5□□□□□ -0.25
TREX1-202ENST00000444177 KRT87PA6NCN2 255 aa13.5□□□□□ -0.25
TREX1-202ENST00000444177 C1orf105O95561 183 aa13.5□□□□□ -0.25
TREX1-202ENST00000444177 MSL3P1P0C860 447 aa13.5□□□□□ -0.25
TREX1-202ENST00000444177 NR1D1P20393 614 aa13.5□□□□□ -0.25
TREX1-202ENST00000444177 CD9P21926 228 aa13.5□□□□□ -0.25
TREX1-202ENST00000444177 ATP5DP30049 168 aa13.5□□□□□ -0.25
TREX1-202ENST00000444177 CCNFP41002 786 aa13.5□□□□□ -0.25
TREX1-202ENST00000444177 ELK3P41970 407 aa13.5□□□□□ -0.25
TREX1-202ENST00000444177 RPL21P46778 160 aaKnown RBP13.5□□□□□ -0.25
TREX1-202ENST00000444177 CLCN7P51798 805 aa13.5□□□□□ -0.25
TREX1-202ENST00000444177 KLRB1Q12918 225 aa13.5□□□□□ -0.25
TREX1-202ENST00000444177 CUL1Q13616 776 aa13.5□□□□□ -0.25
TREX1-202ENST00000444177 GRB7Q14451 532 aa13.5□□□□□ -0.25
TREX1-202ENST00000444177 GBX1Q14549 363 aa13.5□□□□□ -0.25
TREX1-202ENST00000444177 KIR2DS3Q14952 304 aa13.5□□□□□ -0.25
TREX1-202ENST00000444177 IGFBP7Q16270 282 aa13.5□□□□□ -0.25
TREX1-202ENST00000444177 SLC5A12Q1EHB4 618 aa13.5□□□□□ -0.25
TREX1-202ENST00000444177 KLHL38Q2WGJ6 581 aa13.5□□□□□ -0.25
TREX1-202ENST00000444177 DEFB110Q30KQ9 67 aa13.5□□□□□ -0.25
TREX1-202ENST00000444177 CCSMST1Q4G0I0 132 aa13.5□□□□□ -0.25
TREX1-202ENST00000444177 ACSBG2Q5FVE4 666 aa13.5□□□□□ -0.25
TREX1-202ENST00000444177 COLEC12Q5KU26 742 aa13.5□□□□□ -0.25
TREX1-202ENST00000444177 ZNF549Q6P9A3 640 aa13.5□□□□□ -0.25
TREX1-202ENST00000444177 ASB18Q6ZVZ8 466 aa13.5□□□□□ -0.25
TREX1-202ENST00000444177 IGDCC3Q8IVU1 814 aa13.5□□□□□ -0.25
TREX1-202ENST00000444177 CEP112Q8N8E3 955 aa13.5□□□□□ -0.25
TREX1-202ENST00000444177 OR2L8Q8NGY9 312 aa13.5□□□□□ -0.25
TREX1-202ENST00000444177 GIMAP7Q8NHV1 300 aa13.5□□□□□ -0.25
TREX1-202ENST00000444177 FLVCR1-AS1Q8TAF5 88 aa13.5□□□□□ -0.25
TREX1-202ENST00000444177 MAGEC3Q8TD91 643 aa13.5□□□□□ -0.25
TREX1-202ENST00000444177 THAP4Q8WY91 577 aa13.5□□□□□ -0.25
TREX1-202ENST00000444177 KCNJ9Q92806 393 aa13.5□□□□□ -0.25
TREX1-202ENST00000444177 CERS2Q96G23 380 aa13.5□□□□□ -0.25
TREX1-202ENST00000444177 SLC30A3Q99726 388 aa13.5□□□□□ -0.25
TREX1-202ENST00000444177 MENTQ9BUN1 341 aa13.5□□□□□ -0.25
TREX1-202ENST00000444177 DPH5Q9H2P9 285 aa13.5□□□□□ -0.25
TREX1-202ENST00000444177 PPANQ9NQ55 473 aaKnown RBP13.5□□□□□ -0.25
TREX1-202ENST00000444177 SLC17A6Q9P2U8 582 aa13.5□□□□□ -0.25
TREX1-202ENST00000444177 ZC3H7BQ9UGR2 993 aaKnown RBP13.5□□□□□ -0.25
TREX1-202ENST00000444177 SERTAD3Q9UJW9 196 aa13.5□□□□□ -0.25
TREX1-202ENST00000444177 COMMD10Q9Y6G5 202 aa13.5□□□□□ -0.25
TREX1-202ENST00000444177 PRRC2CQ9Y520 2896 aaKnown RBP13.5□□□□□ -0.25
TREX1-202ENST00000444177 CTAGE15A4D2H0 777 aa13.49□□□□□ -0.25
TREX1-202ENST00000444177 ESPNB1AK53 854 aa13.49□□□□□ -0.25
TREX1-202ENST00000444177 RAD51CO43502 376 aa13.49□□□□□ -0.25
TREX1-202ENST00000444177 DNAJB5O75953 348 aa13.49□□□□□ -0.25
TREX1-202ENST00000444177 HAUS5O94927 633 aa13.49□□□□□ -0.25
TREX1-202ENST00000444177 CTAGE8P0CG41 777 aa13.49□□□□□ -0.25
TREX1-202ENST00000444177 CYP2A7P20853 494 aa13.49□□□□□ -0.25
TREX1-202ENST00000444177 RORAP35398 523 aa13.49□□□□□ -0.25
TREX1-202ENST00000444177 CARSP49589 748 aaKnown RBP13.49□□□□□ -0.25
TREX1-202ENST00000444177 FOXK1P85037 733 aa13.49□□□□□ -0.25
TREX1-202ENST00000444177 CBLBQ13191 982 aa13.49□□□□□ -0.25
TREX1-202ENST00000444177 IL10RAQ13651 578 aa13.49□□□□□ -0.25
TREX1-202ENST00000444177 CDHR3Q6ZTQ4 885 aa13.49□□□□□ -0.25
TREX1-202ENST00000444177 CTAGE6Q86UF2 777 aa13.49□□□□□ -0.25
TREX1-202ENST00000444177 ANKMY2Q8IV38 441 aa13.49□□□□□ -0.25
TREX1-202ENST00000444177 SPNS2Q8IVW8 549 aa13.49□□□□□ -0.25
TREX1-202ENST00000444177 CTAGE4Q8IX94 777 aa13.49□□□□□ -0.25
TREX1-202ENST00000444177 FAM20CQ8IXL6 584 aa13.49□□□□□ -0.25
TREX1-202ENST00000444177 DSELQ8IZU8 1212 aa13.49□□□□□ -0.25
TREX1-202ENST00000444177 MMGT1Q8N4V1 131 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms