RNA–Protein interactions for RNA: ENST00000443727.1

LRCH3-208, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-208ENST00000443727 PROKR1Q8TCW9 393 aa19.31■□□□□ 0.68
LRCH3-208ENST00000443727 CALML6Q8TD86 181 aa19.31■□□□□ 0.68
LRCH3-208ENST00000443727 DHRS4Q9BTZ2 278 aa19.31■□□□□ 0.68
LRCH3-208ENST00000443727 DDX47Q9H0S4 455 aaKnown RBP19.31■□□□□ 0.68
LRCH3-208ENST00000443727 FAM114A2Q9NRY5 505 aa19.31■□□□□ 0.68
LRCH3-208ENST00000443727 IFT80Q9P2H3 777 aaPredicted RBP19.31■□□□□ 0.68
LRCH3-208ENST00000443727 GALPQ9UBC7 116 aa19.31■□□□□ 0.68
LRCH3-208ENST00000443727 DHCR7Q9UBM7 475 aaKnown RBP19.31■□□□□ 0.68
LRCH3-208ENST00000443727 ANAPC2Q9UJX6 822 aa19.31■□□□□ 0.68
LRCH3-208ENST00000443727 KRT87PA6NCN2 255 aa19.3■□□□□ 0.68
LRCH3-208ENST00000443727 FKBP9O95302 570 aa19.3■□□□□ 0.68
LRCH3-208ENST00000443727 WISP1O95388 367 aa19.3■□□□□ 0.68
LRCH3-208ENST00000443727 MATN4O95460 622 aa19.3■□□□□ 0.68
LRCH3-208ENST00000443727 CAPN1P07384 714 aa19.3■□□□□ 0.68
LRCH3-208ENST00000443727 CTSBP07858 339 aa19.3■□□□□ 0.68
LRCH3-208ENST00000443727 F7P08709 466 aaPredicted RBP19.3■□□□□ 0.68
LRCH3-208ENST00000443727 ALAS2P22557 587 aa19.3■□□□□ 0.68
LRCH3-208ENST00000443727 MAGEA3P43357 314 aa19.3■□□□□ 0.68
LRCH3-208ENST00000443727 GNG11P61952 73 aa19.3■□□□□ 0.68
LRCH3-208ENST00000443727 CHAF1BQ13112 559 aa19.3■□□□□ 0.68
LRCH3-208ENST00000443727 KLHL38Q2WGJ6 581 aa19.3■□□□□ 0.68
LRCH3-208ENST00000443727 RNASEH2BQ5TBB1 312 aaKnown RBP19.3■□□□□ 0.68
LRCH3-208ENST00000443727 CPZQ66K79 652 aa19.3■□□□□ 0.68
LRCH3-208ENST00000443727 TCTN3Q6NUS6 607 aa19.3■□□□□ 0.68
LRCH3-208ENST00000443727 ASB18Q6ZVZ8 466 aa19.3■□□□□ 0.68
LRCH3-208ENST00000443727 PCGF5Q86SE9 256 aa19.3■□□□□ 0.68
LRCH3-208ENST00000443727 LMNTD2Q8IXW0 634 aa19.3■□□□□ 0.68
LRCH3-208ENST00000443727 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.3■□□□□ 0.68
LRCH3-208ENST00000443727 DLG3Q92796 817 aa19.3■□□□□ 0.68
LRCH3-208ENST00000443727 CAPZA3Q96KX2 299 aa19.3■□□□□ 0.68
LRCH3-208ENST00000443727 SIGLEC10Q96LC7 697 aa19.3■□□□□ 0.68
LRCH3-208ENST00000443727 MIPEPQ99797 713 aa19.3■□□□□ 0.68
LRCH3-208ENST00000443727 FAM167BQ9BTA0 163 aa19.3■□□□□ 0.68
LRCH3-208ENST00000443727 TRIM55Q9BYV6 548 aa19.3■□□□□ 0.68
LRCH3-208ENST00000443727 ING2Q9H160 280 aa19.3■□□□□ 0.68
LRCH3-208ENST00000443727 SPATA7Q9P0W8 599 aa19.3■□□□□ 0.68
LRCH3-208ENST00000443727 NDOR1Q9UHB4 597 aa19.3■□□□□ 0.68
LRCH3-208ENST00000443727 USP27XA6NNY8 438 aa19.29■□□□□ 0.68
LRCH3-208ENST00000443727 H3BMH7 237 aa19.29■□□□□ 0.68
LRCH3-208ENST00000443727 CATP04040 527 aaKnown RBP19.29■□□□□ 0.68
LRCH3-208ENST00000443727 CD63P08962 238 aa19.29■□□□□ 0.68
LRCH3-208ENST00000443727 PGAM1P18669 254 aa19.29■□□□□ 0.68
LRCH3-208ENST00000443727 NR1D1P20393 614 aa19.29■□□□□ 0.68
LRCH3-208ENST00000443727 SLC1A2P43004 574 aa19.29■□□□□ 0.68
LRCH3-208ENST00000443727 PTGIRP43119 386 aa19.29■□□□□ 0.68
LRCH3-208ENST00000443727 CCL11P51671 97 aa19.29■□□□□ 0.68
LRCH3-208ENST00000443727 TLE1Q04724 770 aa19.29■□□□□ 0.68
LRCH3-208ENST00000443727 TSTA3Q13630 321 aaPredicted RBP19.29■□□□□ 0.68
LRCH3-208ENST00000443727 GBX1Q14549 363 aa19.29■□□□□ 0.68
LRCH3-208ENST00000443727 SLC9A5Q14940 896 aa19.29■□□□□ 0.68
LRCH3-208ENST00000443727 ZNF385CQ66K41 422 aaPredicted RBP19.29■□□□□ 0.68
LRCH3-208ENST00000443727 FCRL6Q6DN72 434 aa19.29■□□□□ 0.68
LRCH3-208ENST00000443727 RAB43Q86YS6 212 aa19.29■□□□□ 0.68
LRCH3-208ENST00000443727 TEX19Q8NA77 164 aa19.29■□□□□ 0.68
LRCH3-208ENST00000443727 OR9A1PQ8NGU1 263 aa19.29■□□□□ 0.68
LRCH3-208ENST00000443727 GABPB2Q8TAK5 448 aaPredicted RBP19.29■□□□□ 0.68
LRCH3-208ENST00000443727 DENND1AQ8TEH3 1009 aa19.29■□□□□ 0.68
LRCH3-208ENST00000443727 ZUFSPQ96AP4 578 aa19.29■□□□□ 0.68
LRCH3-208ENST00000443727 GBP5Q96PP8 586 aa19.29■□□□□ 0.68
LRCH3-208ENST00000443727 SELENOSQ9BQE4 189 aa19.29■□□□□ 0.68
LRCH3-208ENST00000443727 CLMPQ9H6B4 373 aa19.29■□□□□ 0.68
LRCH3-208ENST00000443727 DNALI1O14645 258 aaPredicted RBP19.28■□□□□ 0.68
LRCH3-208ENST00000443727 PSMB5P28074 263 aa19.28■□□□□ 0.68
LRCH3-208ENST00000443727 OTX2P32243 289 aa19.28■□□□□ 0.68
LRCH3-208ENST00000443727 CASRP41180 1078 aa19.28■□□□□ 0.68
LRCH3-208ENST00000443727 FOLR3P41439 243 aa19.28■□□□□ 0.68
LRCH3-208ENST00000443727 CSRP3P50461 194 aa19.28■□□□□ 0.68
LRCH3-208ENST00000443727 CLCN7P51798 805 aa19.28■□□□□ 0.68
LRCH3-208ENST00000443727 ARSFP54793 590 aa19.28■□□□□ 0.68
LRCH3-208ENST00000443727 KLRB1Q12918 225 aa19.28■□□□□ 0.68
LRCH3-208ENST00000443727 PTK6Q13882 451 aa19.28■□□□□ 0.68
LRCH3-208ENST00000443727 NKAIN1Q4KMZ8 207 aa19.28■□□□□ 0.68
LRCH3-208ENST00000443727 HSP90AA5PQ58FG0 334 aa19.28■□□□□ 0.68
LRCH3-208ENST00000443727 TTLL10Q6ZVT0 673 aa19.28■□□□□ 0.68
LRCH3-208ENST00000443727 KCNMB4Q86W47 210 aa19.28■□□□□ 0.68
LRCH3-208ENST00000443727 AGGF1Q8N302 714 aaeCLIP19.28■□□□□ 0.68
LRCH3-208ENST00000443727 HMGCLL1Q8TB92 370 aa19.28■□□□□ 0.68
LRCH3-208ENST00000443727 ADAMTS17Q8TE56 1095 aa19.28■□□□□ 0.68
LRCH3-208ENST00000443727 KCNJ9Q92806 393 aa19.28■□□□□ 0.68
LRCH3-208ENST00000443727 SLC25A23Q9BV35 468 aa19.28■□□□□ 0.68
LRCH3-208ENST00000443727 IARS2Q9NSE4 1012 aaKnown RBP19.28■□□□□ 0.68
LRCH3-208ENST00000443727 PCYOX1Q9UHG3 505 aa19.28■□□□□ 0.68
LRCH3-208ENST00000443727 FBXO5Q9UKT4 447 aa19.28■□□□□ 0.68
LRCH3-208ENST00000443727 G3BP2Q9UN86 482 aaKnown RBP19.28■□□□□ 0.68
LRCH3-208ENST00000443727 PTRH2Q9Y3E5 179 aaKnown RBP19.28■□□□□ 0.68
LRCH3-208ENST00000443727 COMMD10Q9Y6G5 202 aa19.28■□□□□ 0.68
LRCH3-208ENST00000443727 FAM169AQ9Y6X4 670 aa19.28■□□□□ 0.68
LRCH3-208ENST00000443727 TENM4Q6N022 2769 aa19.28■□□□□ 0.68
LRCH3-208ENST00000443727 ARHGEF33A8MVX0 844 aa19.27■□□□□ 0.68
LRCH3-208ENST00000443727 TARM1B6A8C7 271 aa19.27■□□□□ 0.68
LRCH3-208ENST00000443727 PRICKLE3O43900 615 aaPredicted RBP19.27■□□□□ 0.68
LRCH3-208ENST00000443727 CMPK1P30085 196 aa19.27■□□□□ 0.68
LRCH3-208ENST00000443727 RPA3P35244 121 aaPredicted RBP19.27■□□□□ 0.68
LRCH3-208ENST00000443727 PGDP52209 483 aa19.27■□□□□ 0.68
LRCH3-208ENST00000443727 CUL1Q13616 776 aa19.27■□□□□ 0.68
LRCH3-208ENST00000443727 CYP2A13Q16696 494 aa19.27■□□□□ 0.68
LRCH3-208ENST00000443727 TCTE1Q5JU00 501 aa19.27■□□□□ 0.68
LRCH3-208ENST00000443727 KLHL7Q8IXQ5 586 aa19.27■□□□□ 0.68
LRCH3-208ENST00000443727 TTC29Q8NA56 475 aaPredicted RBP19.27■□□□□ 0.68
LRCH3-208ENST00000443727 OR2L3Q8NG85 312 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms