RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 VIPP01282 170 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 CYP2C18P33260 490 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 ABATP80404 500 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 NPRL3Q12980 569 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 CAPSQ13938 189 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 ANKRD53Q8N9V6 530 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 C9orf43Q8TAL5 461 aaPredicted RBP4.91□□□□□ -1.62
HERC1-201ENST00000443617 MCUBQ9NWR8 336 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 MALT1Q9UDY8 824 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 EIF2B4Q9UI10 523 aaKnown RBP4.91□□□□□ -1.62
HERC1-201ENST00000443617 GLS2Q9UI32 602 aa4.91□□□□□ -1.62
HERC1-201ENST00000443617 INMT-MINDY4F8WBC2 141 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 TNFRSF11BO00300 401 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 B4GALT5O43286 388 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 SNAPC5O75971 98 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 EFR3AQ14156 821 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 FAM98CQ17RN3 349 aaKnown RBP4.9□□□□□ -1.62
HERC1-201ENST00000443617 ANKRD46Q86W74 232 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 C8orf48Q96LL4 319 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 FOLH1BQ9HBA9 442 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 TREX1Q9NSU2 369 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 MAD2L1Q13257 205 aaPredicted RBP4.9□□□□□ -1.62
HERC1-201ENST00000443617 TECRLQ5HYJ1 363 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 DGLUCYQ7Z3D6 616 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 FAM217AQ8IXS0 508 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 ZNF583Q96ND8 569 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 ZNF416Q9BWM5 594 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 GLIS2Q9BZE0 524 aaPredicted RBP4.9□□□□□ -1.62
HERC1-201ENST00000443617 FZD1Q9UP38 647 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 BAIAP2Q9UQB8 552 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 NAALAD2Q9Y3Q0 740 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 PCDHGB3Q9Y5G1 929 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 CACNA1IQ9P0X4 2223 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 C6orf136Q5SQH8 315 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 CAPN13Q6MZZ7 669 aaPredicted RBP4.9□□□□□ -1.62
HERC1-201ENST00000443617 ANGPTL8Q6UXH0 198 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 USP30Q70CQ3 517 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 SRFBP1Q8NEF9 429 aaKnown RBP4.9□□□□□ -1.62
HERC1-201ENST00000443617 FAM151AQ8WW52 585 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 EGLN2Q96KS0 407 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 MYOCQ99972 504 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 SLC28A3Q9HAS3 691 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 SP110Q9HB58 689 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 HEBP1Q9NRV9 189 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 PSORS1C1Q9UIG5 152 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 PLCL2Q9UPR0 1127 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 ATF6P18850 670 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 TGFBR1P36897 503 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 NRIP1P48552 1158 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 FOXA1P55317 472 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 MBTD1Q05BQ5 628 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 WSCD1Q658N2 575 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 ZMIZ2Q8NF64 920 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 HMGCLL1Q8TB92 370 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 ASB12Q8WXK4 309 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 GGHQ92820 318 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 ZNF578Q96N58 590 aaPredicted RBP4.9□□□□□ -1.62
HERC1-201ENST00000443617 SLC9A7Q96T83 725 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 CDADC1Q9BWV3 514 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 DEFB129Q9H1M3 183 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 USP3Q9Y6I4 520 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 OAS3Q9Y6K5 1087 aaKnown RBP4.9□□□□□ -1.62
HERC1-201ENST00000443617 ARVCFO00192 962 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 RGS14O43566 566 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 PURAQ00577 322 aaKnown RBP4.9□□□□□ -1.62
HERC1-201ENST00000443617 DCAF4L1Q3SXM0 396 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 VN1R5Q7Z5H4 357 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 BEND7Q8N7W2 519 aaPredicted RBP4.9□□□□□ -1.62
HERC1-201ENST00000443617 OR8K5Q8NH50 307 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 ANKRD49Q8WVL7 239 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 CREB3L1Q96BA8 519 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 NFKBIZQ9BYH8 718 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 LRTM1Q9HBL6 345 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 EMC7Q9NPA0 242 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 IL1RAPQ9NPH3 570 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 MLXQ9UH92 298 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 UBQLN2Q9UHD9 624 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 FAM72CH0Y354 149 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 TRIM3O75382 744 aaPredicted RBP4.9□□□□□ -1.62
HERC1-201ENST00000443617 ALDH9A1P49189 494 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 SCNN1GP51170 649 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 CARD16Q5EG05 197 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 FAM72AQ5TYM5 149 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 FAM72DQ6L9T8 149 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 FAM72BQ86X60 149 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 OR52J3Q8NH60 311 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 PPP1R13LQ8WUF5 828 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 EDEM1Q92611 657 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 HYLS1Q96M11 299 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 TM9SF2Q99805 663 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.9□□□□□ -1.62
HERC1-201ENST00000443617 WWOXQ9NZC7 414 aa4.9□□□□□ -1.62
HERC1-201ENST00000443617 MRPL42Q9Y6G3 142 aaKnown RBP4.9□□□□□ -1.62
HERC1-201ENST00000443617 A0A1W2PQL4 384 aaPredicted RBP4.9□□□□□ -1.63
HERC1-201ENST00000443617 SSX4O60224 188 aa4.9□□□□□ -1.63
HERC1-201ENST00000443617 CDK1P06493 297 aa4.9□□□□□ -1.63
HERC1-201ENST00000443617 CYP2A6P11509 494 aaPredicted RBP4.9□□□□□ -1.63
HERC1-201ENST00000443617 SSTR4P31391 388 aa4.9□□□□□ -1.63
HERC1-201ENST00000443617 HSF2Q03933 536 aa4.9□□□□□ -1.63
HERC1-201ENST00000443617 CRTC2Q53ET0 693 aaPredicted RBP4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms