RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 EIF2B4Q9UI10 523 aaKnown RBP7.88□□□□□ -1.15
CCDC39-201ENST00000442201 PCTPQ9UKL6 214 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 PDE10AQ9Y233 779 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 NOTOA8MTQ0 251 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 ZNF195O14628 629 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 GIPC1O14908 333 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 HNRNPCL1O60812 293 aaKnown RBP7.88□□□□□ -1.15
CCDC39-201ENST00000442201 SEMA4FO95754 770 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 MLYCDO95822 493 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 CATP04040 527 aaKnown RBP7.88□□□□□ -1.15
CCDC39-201ENST00000442201 SMIM18P0DKX4 95 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 PRKACBP22694 351 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 IDH3AP50213 366 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 AP1S2P56377 157 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 CDKL1Q00532 357 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 ABRQ12979 859 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 GAS6Q14393 721 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 PCBP2Q15366 365 aaKnown RBP eCLIP7.88□□□□□ -1.15
CCDC39-201ENST00000442201 MAVSQ7Z434 540 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 MTDHQ86UE4 582 aaKnown RBP7.88□□□□□ -1.15
CCDC39-201ENST00000442201 AMZ2Q86W34 360 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 UBALD2Q8IYN6 164 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 SLC22A15Q8IZD6 547 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 OR56A4Q8NGH8 313 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 OR2L2Q8NH16 312 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 ERP27Q96DN0 273 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 MID1IP1Q9NPA3 183 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 FZD3Q9NPG1 666 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 SEMA4BQ9NPR2 832 aaPredicted RBP7.88□□□□□ -1.15
CCDC39-201ENST00000442201 GULP1Q9UBP9 304 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 PTBP2Q9UKA9 531 aaKnown RBP7.88□□□□□ -1.15
CCDC39-201ENST00000442201 DMTF1Q9Y222 760 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 TRAF6Q9Y4K3 522 aa7.88□□□□□ -1.15
CCDC39-201ENST00000442201 DNMT3AQ9Y6K1 912 aaPredicted RBP7.88□□□□□ -1.15
CCDC39-201ENST00000442201 PLXNB3Q9ULL4 1909 aa7.87□□□□□ -1.15
CCDC39-201ENST00000442201 H0Y3Z8 333 aa7.87□□□□□ -1.15
CCDC39-201ENST00000442201 CACNB4O00305 520 aaPredicted RBP7.87□□□□□ -1.15
CCDC39-201ENST00000442201 UBFD1O14562 309 aaKnown RBP7.87□□□□□ -1.15
CCDC39-201ENST00000442201 GRID2O43424 1007 aa7.87□□□□□ -1.15
CCDC39-201ENST00000442201 CNOT3O75175 753 aaKnown RBP7.87□□□□□ -1.15
CCDC39-201ENST00000442201 OR6B1O95007 311 aa7.87□□□□□ -1.15
CCDC39-201ENST00000442201 MATN4O95460 622 aa7.87□□□□□ -1.15
CCDC39-201ENST00000442201 T-ENOLP0DO92 83 aa7.87□□□□□ -1.15
CCDC39-201ENST00000442201 ZNF12P17014 697 aa7.87□□□□□ -1.15
CCDC39-201ENST00000442201 MAP4P27816 1152 aaKnown RBP7.87□□□□□ -1.15
CCDC39-201ENST00000442201 HMOX2P30519 316 aa7.87□□□□□ -1.15
CCDC39-201ENST00000442201 ZNF658BQ4V348 819 aaPredicted RBP7.87□□□□□ -1.15
CCDC39-201ENST00000442201 TMEM31Q5JXX7 168 aa7.87□□□□□ -1.15
CCDC39-201ENST00000442201 TMTC4Q5T4D3 741 aa7.87□□□□□ -1.15
CCDC39-201ENST00000442201 VWA5B1Q5TIE3 1220 aa7.87□□□□□ -1.15
CCDC39-201ENST00000442201 EPGNQ6UW88 154 aa7.87□□□□□ -1.15
CCDC39-201ENST00000442201 CCBE1Q6UXH8 406 aaPredicted RBP7.87□□□□□ -1.15
CCDC39-201ENST00000442201 C11orf96Q7Z7L8 435 aa7.87□□□□□ -1.15
CCDC39-201ENST00000442201 TCAIMQ8N3R3 496 aa7.87□□□□□ -1.15
CCDC39-201ENST00000442201 SUN5Q8TC36 379 aa7.87□□□□□ -1.15
CCDC39-201ENST00000442201 RHBDF1Q96CC6 855 aa7.87□□□□□ -1.15
CCDC39-201ENST00000442201 APOOQ9BUR5 198 aa7.87□□□□□ -1.15
CCDC39-201ENST00000442201 ZFP69BQ9UJL9 534 aa7.87□□□□□ -1.15
CCDC39-201ENST00000442201 FIS1Q9Y3D6 152 aa7.87□□□□□ -1.15
CCDC39-201ENST00000442201 PRKAB1Q9Y478 270 aa7.87□□□□□ -1.15
CCDC39-201ENST00000442201 C19orf67A6NJJ6 358 aa7.87□□□□□ -1.15
CCDC39-201ENST00000442201 TRPC5OSA6NMA1 111 aa7.87□□□□□ -1.15
CCDC39-201ENST00000442201 TMEM233B4DJY2 109 aa7.87□□□□□ -1.15
CCDC39-201ENST00000442201 STK25O00506 426 aa7.87□□□□□ -1.15
CCDC39-201ENST00000442201 E2F3O00716 465 aa7.87□□□□□ -1.15
CCDC39-201ENST00000442201 FPGTO14772 594 aa7.87□□□□□ -1.15
CCDC39-201ENST00000442201 FOXD2O60548 495 aaPredicted RBP7.87□□□□□ -1.15
CCDC39-201ENST00000442201 CCDC22O60826 627 aa7.87□□□□□ -1.15
CCDC39-201ENST00000442201 PSMG1O95456 288 aa7.87□□□□□ -1.15
CCDC39-201ENST00000442201 IGLV3-19P01714 112 aa7.87□□□□□ -1.15
CCDC39-201ENST00000442201 HNRNPA2B1P22626 353 aaKnown RBP7.87□□□□□ -1.15
CCDC39-201ENST00000442201 PDHA2P29803 388 aa7.87□□□□□ -1.15
CCDC39-201ENST00000442201 GSSP48637 474 aa7.87□□□□□ -1.15
CCDC39-201ENST00000442201 HSPA7P48741 367 aa7.87□□□□□ -1.15
CCDC39-201ENST00000442201 THOP1P52888 689 aa7.87□□□□□ -1.15
CCDC39-201ENST00000442201 SH3BP2P78314 561 aa7.87□□□□□ -1.15
CCDC39-201ENST00000442201 FZD5Q13467 585 aa7.87□□□□□ -1.15
CCDC39-201ENST00000442201 PLA2G4EQ3MJ16 856 aa7.87□□□□□ -1.15
CCDC39-201ENST00000442201 NIPAL1Q6NVV3 410 aa7.87□□□□□ -1.15
CCDC39-201ENST00000442201 METTL2BQ6P1Q9 378 aaKnown RBP7.87□□□□□ -1.15
CCDC39-201ENST00000442201 CLYBLQ8N0X4 340 aa7.87□□□□□ -1.15
CCDC39-201ENST00000442201 LINC00469Q8N7U9 141 aa7.87□□□□□ -1.15
CCDC39-201ENST00000442201 LSMEM1Q8N8F7 131 aa7.87□□□□□ -1.15
CCDC39-201ENST00000442201 MAPK15Q8TD08 544 aa7.87□□□□□ -1.15
CCDC39-201ENST00000442201 NUF2Q9BZD4 464 aa7.87□□□□□ -1.15
CCDC39-201ENST00000442201 DPEP2Q9H4A9 486 aa7.87□□□□□ -1.15
CCDC39-201ENST00000442201 ZBTB26Q9HCK0 441 aa7.87□□□□□ -1.15
CCDC39-201ENST00000442201 OPTCQ9UBM4 332 aa7.87□□□□□ -1.15
CCDC39-201ENST00000442201 ANGPTL3Q9Y5C1 460 aa7.87□□□□□ -1.15
CCDC39-201ENST00000442201 PPP6CO00743 305 aa7.86□□□□□ -1.15
CCDC39-201ENST00000442201 TAPBPO15533 448 aa7.86□□□□□ -1.15
CCDC39-201ENST00000442201 PSIP1O75475 530 aaKnown RBP7.86□□□□□ -1.15
CCDC39-201ENST00000442201 CRCPO75575 148 aa7.86□□□□□ -1.15
CCDC39-201ENST00000442201 FGF4P08620 206 aa7.86□□□□□ -1.15
CCDC39-201ENST00000442201 OXTRP30559 389 aa7.86□□□□□ -1.15
CCDC39-201ENST00000442201 HNMTP50135 292 aa7.86□□□□□ -1.15
CCDC39-201ENST00000442201 RASSF2P50749 326 aa7.86□□□□□ -1.15
CCDC39-201ENST00000442201 RPA4Q13156 261 aa7.86□□□□□ -1.15
CCDC39-201ENST00000442201 TUBA3CQ13748 450 aa7.86□□□□□ -1.15
CCDC39-201ENST00000442201 NFE2L1Q14494 772 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms