RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 TAF1BQ53T94 588 aaPredicted RBP22.78■■□□□ 1.24
VARS-217ENST00000440048 UGT3A1Q6NUS8 523 aa22.78■■□□□ 1.24
VARS-217ENST00000440048 ZBED8Q8IZ13 594 aa22.78■■□□□ 1.24
VARS-217ENST00000440048 SLC38A9Q8NBW4 561 aa22.78■■□□□ 1.24
VARS-217ENST00000440048 AKIRIN1Q9H9L7 192 aaPredicted RBP22.78■■□□□ 1.24
VARS-217ENST00000440048 TAS2R13Q9NYV9 303 aa22.78■■□□□ 1.24
VARS-217ENST00000440048 CAMSAP3Q9P1Y5 1249 aaPredicted RBP22.78■■□□□ 1.24
VARS-217ENST00000440048 TRMT6Q9UJA5 497 aaKnown RBP22.78■■□□□ 1.24
VARS-217ENST00000440048 KLHL20Q9Y2M5 609 aa22.78■■□□□ 1.24
VARS-217ENST00000440048 PCDHB3Q9Y5E6 796 aa22.78■■□□□ 1.24
VARS-217ENST00000440048 ZNF891A8MT65 544 aaPredicted RBP22.77■■□□□ 1.24
VARS-217ENST00000440048 MYO1CO00159 1063 aa22.77■■□□□ 1.24
VARS-217ENST00000440048 TERTO14746 1132 aaKnown RBP22.77■■□□□ 1.24
VARS-217ENST00000440048 HCRTR1O43613 425 aa22.77■■□□□ 1.24
VARS-217ENST00000440048 CYP2A7P20853 494 aa22.77■■□□□ 1.24
VARS-217ENST00000440048 MAGP20916 626 aa22.77■■□□□ 1.24
VARS-217ENST00000440048 OAS2P29728 719 aaKnown RBP22.77■■□□□ 1.24
VARS-217ENST00000440048 CDKN2DP55273 166 aa22.77■■□□□ 1.24
VARS-217ENST00000440048 ITGA1P56199 1179 aa22.77■■□□□ 1.24
VARS-217ENST00000440048 MGAT5Q09328 741 aa22.77■■□□□ 1.24
VARS-217ENST00000440048 C19orf57Q0VDD7 668 aa22.77■■□□□ 1.24
VARS-217ENST00000440048 SF1Q15637 639 aaKnown RBP22.77■■□□□ 1.24
VARS-217ENST00000440048 DEFB110Q30KQ9 67 aa22.77■■□□□ 1.24
VARS-217ENST00000440048 PIWIL4Q7Z3Z4 852 aaKnown RBP22.77■■□□□ 1.24
VARS-217ENST00000440048 DNAJC22Q8N4W6 341 aa22.77■■□□□ 1.24
VARS-217ENST00000440048 CT55Q8WUE5 264 aa22.77■■□□□ 1.24
VARS-217ENST00000440048 ASB11Q8WXH4 323 aa22.77■■□□□ 1.24
VARS-217ENST00000440048 RAB17Q9H0T7 212 aa22.77■■□□□ 1.24
VARS-217ENST00000440048 MOCS1Q9NZB8 636 aa22.77■■□□□ 1.24
VARS-217ENST00000440048 MRPS18BQ9Y676 258 aaKnown RBP22.77■■□□□ 1.24
VARS-217ENST00000440048 GFYI3L273 518 aa22.76■■□□□ 1.23
VARS-217ENST00000440048 EIF3FO00303 357 aaPredicted RBP22.76■■□□□ 1.23
VARS-217ENST00000440048 ERGP11308 486 aa22.76■■□□□ 1.23
VARS-217ENST00000440048 SKIV2L2P42285 1042 aaKnown RBP22.76■■□□□ 1.23
VARS-217ENST00000440048 GPS2Q13227 327 aa22.76■■□□□ 1.23
VARS-217ENST00000440048 FASTKQ14296 549 aaKnown RBP22.76■■□□□ 1.23
VARS-217ENST00000440048 ZNF592Q92610 1267 aa22.76■■□□□ 1.23
VARS-217ENST00000440048 N4BP2L2Q92802 583 aaPredicted RBP22.76■■□□□ 1.23
VARS-217ENST00000440048 PKP4Q99569 1192 aa22.76■■□□□ 1.23
VARS-217ENST00000440048 SAYSD1Q9NPB0 183 aa22.76■■□□□ 1.23
VARS-217ENST00000440048 ANKRD12Q6UB98 2062 aa22.75■■□□□ 1.23
VARS-217ENST00000440048 A0A1W2PPV9 198 aa22.75■■□□□ 1.23
VARS-217ENST00000440048 E7EQ34 232 aa22.75■■□□□ 1.23
VARS-217ENST00000440048 EIF3HO15372 352 aaKnown RBP eCLIP22.75■■□□□ 1.23
VARS-217ENST00000440048 NKX2-8O15522 239 aa22.75■■□□□ 1.23
VARS-217ENST00000440048 FKBP9O95302 570 aa22.75■■□□□ 1.23
VARS-217ENST00000440048 TCN2P20062 427 aa22.75■■□□□ 1.23
VARS-217ENST00000440048 PSMB5P28074 263 aa22.75■■□□□ 1.23
VARS-217ENST00000440048 PLTPP55058 493 aa22.75■■□□□ 1.23
VARS-217ENST00000440048 DNASE1L3Q13609 305 aa22.75■■□□□ 1.23
VARS-217ENST00000440048 TRADDQ15628 312 aa22.75■■□□□ 1.23
VARS-217ENST00000440048 WHAMMP3Q1A5X7 153 aa22.75■■□□□ 1.23
VARS-217ENST00000440048 FAM199XQ6PEV8 388 aaPredicted RBP22.75■■□□□ 1.23
VARS-217ENST00000440048 FIGLAQ6QHK4 219 aa22.75■■□□□ 1.23
VARS-217ENST00000440048 PAQR3Q6TCH7 311 aa22.75■■□□□ 1.23
VARS-217ENST00000440048 FBXO15Q8NCQ5 510 aaPredicted RBP22.75■■□□□ 1.23
VARS-217ENST00000440048 PYROXD1Q8WU10 500 aa22.75■■□□□ 1.23
VARS-217ENST00000440048 EEF1AKMT1Q8WVE0 214 aa22.75■■□□□ 1.23
VARS-217ENST00000440048 STARD8Q92502 1023 aa22.75■■□□□ 1.23
VARS-217ENST00000440048 LRFN5Q96NI6 719 aa22.75■■□□□ 1.23
VARS-217ENST00000440048 ACTR5Q9H9F9 607 aaPredicted RBP22.75■■□□□ 1.23
VARS-217ENST00000440048 INTS7Q9NVH2 962 aaKnown RBP22.75■■□□□ 1.23
VARS-217ENST00000440048 ZFATQ9P243 1243 aa22.75■■□□□ 1.23
VARS-217ENST00000440048 CORO1CQ9ULV4 474 aaPredicted RBP22.75■■□□□ 1.23
VARS-217ENST00000440048 PSAT1Q9Y617 370 aa22.75■■□□□ 1.23
VARS-217ENST00000440048 H3BMH7 237 aa22.74■■□□□ 1.23
VARS-217ENST00000440048 KATNA1O75449 491 aa22.74■■□□□ 1.23
VARS-217ENST00000440048 ITGB2P05107 769 aa22.74■■□□□ 1.23
VARS-217ENST00000440048 CTSBP07858 339 aa22.74■■□□□ 1.23
VARS-217ENST00000440048 ARHGAP19Q14CB8 494 aa22.74■■□□□ 1.23
VARS-217ENST00000440048 HECTD2Q5U5R9 776 aa22.74■■□□□ 1.23
VARS-217ENST00000440048 FCRL6Q6DN72 434 aa22.74■■□□□ 1.23
VARS-217ENST00000440048 CAPN12Q6ZSI9 719 aa22.74■■□□□ 1.23
VARS-217ENST00000440048 GPR135Q8IZ08 494 aa22.74■■□□□ 1.23
VARS-217ENST00000440048 GPATCH11Q8N954 259 aa22.74■■□□□ 1.23
VARS-217ENST00000440048 OR2A1Q8NGT9 310 aa22.74■■□□□ 1.23
VARS-217ENST00000440048 EXTL1Q92935 676 aa22.74■■□□□ 1.23
VARS-217ENST00000440048 MR1Q95460 341 aa22.74■■□□□ 1.23
VARS-217ENST00000440048 CLIP3Q96DZ5 547 aa22.74■■□□□ 1.23
VARS-217ENST00000440048 MIPEPQ99797 713 aa22.74■■□□□ 1.23
VARS-217ENST00000440048 SPRTNQ9H040 489 aaPredicted RBP22.74■■□□□ 1.23
VARS-217ENST00000440048 KCND3Q9UK17 655 aa22.74■■□□□ 1.23
VARS-217ENST00000440048 PLCL2Q9UPR0 1127 aa22.74■■□□□ 1.23
VARS-217ENST00000440048 VWA7Q9Y334 891 aa22.74■■□□□ 1.23
VARS-217ENST00000440048 SPTA1P02549 2419 aa22.73■■□□□ 1.23
VARS-217ENST00000440048 C21orf140B9A014 251 aa22.73■■□□□ 1.23
VARS-217ENST00000440048 MEN1O00255 615 aa22.73■■□□□ 1.23
VARS-217ENST00000440048 ZNF749O43361 778 aa22.73■■□□□ 1.23
VARS-217ENST00000440048 ZBTB14O43829 449 aa22.73■■□□□ 1.23
VARS-217ENST00000440048 OR2B3O76000 313 aa22.73■■□□□ 1.23
VARS-217ENST00000440048 PRKAR1AP10644 381 aa22.73■■□□□ 1.23
VARS-217ENST00000440048 RORAP35398 523 aa22.73■■□□□ 1.23
VARS-217ENST00000440048 GRIA3P42263 894 aa22.73■■□□□ 1.23
VARS-217ENST00000440048 RGS4P49798 205 aa22.73■■□□□ 1.23
VARS-217ENST00000440048 PNLIPRP1P54315 467 aa22.73■■□□□ 1.23
VARS-217ENST00000440048 SLC7A5Q01650 507 aa22.73■■□□□ 1.23
VARS-217ENST00000440048 CAV1Q03135 178 aa22.73■■□□□ 1.23
VARS-217ENST00000440048 TBR1Q16650 682 aa22.73■■□□□ 1.23
VARS-217ENST00000440048 LINC00303Q3SY05 128 aa22.73■■□□□ 1.23
VARS-217ENST00000440048 LRRC8EQ6NSJ5 796 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms