RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 A0A0G2JLL6 359 aaPredicted RBP8.84□□□□□ -0.99
COPB1-202ENST00000439561 E2F3O00716 465 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 SLC25A14O95258 325 aaPredicted RBP8.84□□□□□ -0.99
COPB1-202ENST00000439561 NPPAP01160 153 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 TNFRSF1BP20333 461 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 HK3P52790 923 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 CRYBB1P53674 252 aaPredicted RBP8.84□□□□□ -0.99
COPB1-202ENST00000439561 ZXDBP98169 803 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 GRIK2Q13002 908 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 TBRG1Q3YBR2 411 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 PRRT2Q7Z6L0 340 aaPredicted RBP8.84□□□□□ -0.99
COPB1-202ENST00000439561 RAB43Q86YS6 212 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 WDR36Q8NI36 951 aaKnown RBP8.84□□□□□ -0.99
COPB1-202ENST00000439561 VMP1Q96GC9 406 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 HSH2DQ96JZ2 352 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 TINF2Q9BSI4 451 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 TTPALQ9BTX7 342 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 IRF2BPLQ9H1B7 796 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 TNKS2Q9H2K2 1166 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 ASB8Q9H765 288 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 ARNT2Q9HBZ2 717 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 ABCB9Q9NP78 766 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 TLR8Q9NR97 1041 aaKnown RBP8.84□□□□□ -0.99
COPB1-202ENST00000439561 SNTG1Q9NSN8 517 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 VNN3Q9NY84 501 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 RPS6KA6Q9UK32 745 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 RAI2Q9Y5P3 530 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 FER1L6Q2WGJ9 1857 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 TTC3P53804 2025 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 COL11A1P12107 1806 aaPredicted RBP8.84□□□□□ -0.99
COPB1-202ENST00000439561 DNAJC25-GNG10A0A024R161 153 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 MROH6A6NGR9 719 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 TBKBP1A7MCY6 615 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 SLC28A1O00337 649 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 CXCL11O14625 94 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 FPGTO14772 594 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 TLL1O43897 1013 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 CACNG3O60359 315 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 CPNE3O75131 537 aaKnown RBP8.84□□□□□ -0.99
COPB1-202ENST00000439561 RHOCP08134 193 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 HIST1H2AGP0C0S8 130 aaPredicted RBP8.84□□□□□ -0.99
COPB1-202ENST00000439561 HIST1H2ADP20671 130 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 DNAJA1P31689 397 aaKnown RBP8.84□□□□□ -0.99
COPB1-202ENST00000439561 PPP3CCP48454 512 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 SPIBQ01892 262 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 HSPA14Q0VDF9 509 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 CAMK2GQ13555 558 aaPredicted RBP8.84□□□□□ -0.99
COPB1-202ENST00000439561 RAB41Q5JT25 222 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 PPP2R2DQ66LE6 453 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 SZRD1Q7Z422 152 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 SCD5Q86SK9 330 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 CCDC117Q8IWD4 279 aaPredicted RBP8.84□□□□□ -0.99
COPB1-202ENST00000439561 LILRB4Q8NHJ6 448 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 ARRDC2Q8TBH0 407 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 PHF10Q8WUB8 498 aaKnown RBP8.84□□□□□ -0.99
COPB1-202ENST00000439561 HIST1H2AHQ96KK5 128 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 HIST1H2AJQ99878 128 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 ACBD6Q9BR61 282 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 H2AFJQ9BTM1 129 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 ADGRE3Q9BY15 652 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 DCAF13Q9NV06 445 aaKnown RBP8.84□□□□□ -0.99
COPB1-202ENST00000439561 TAS2R16Q9NYV7 291 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 NUDT4Q9NZJ9 180 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 DKK3Q9UBP4 350 aa8.84□□□□□ -0.99
COPB1-202ENST00000439561 DNMT3AQ9Y6K1 912 aaPredicted RBP8.84□□□□□ -0.99
COPB1-202ENST00000439561 TRIM64A6NGJ6 449 aa8.83□□□□□ -1
COPB1-202ENST00000439561 HHLA1C9JL84 531 aa8.83□□□□□ -1
COPB1-202ENST00000439561 PDHXO00330 501 aa8.83□□□□□ -1
COPB1-202ENST00000439561 CTDSP2O14595 271 aa8.83□□□□□ -1
COPB1-202ENST00000439561 TMCC2O75069 709 aa8.83□□□□□ -1
COPB1-202ENST00000439561 DNAJB5O75953 348 aa8.83□□□□□ -1
COPB1-202ENST00000439561 KCNK2O95069 426 aa8.83□□□□□ -1
COPB1-202ENST00000439561 PRSS23O95084 383 aa8.83□□□□□ -1
COPB1-202ENST00000439561 SNAI1O95863 264 aaPredicted RBP8.83□□□□□ -1
COPB1-202ENST00000439561 ITGB1P05556 798 aa8.83□□□□□ -1
COPB1-202ENST00000439561 ZNF7P17097 686 aaPredicted RBP8.83□□□□□ -1
COPB1-202ENST00000439561 ITPKAP23677 461 aa8.83□□□□□ -1
COPB1-202ENST00000439561 RRM2P31350 389 aa8.83□□□□□ -1
COPB1-202ENST00000439561 THPOP40225 353 aa8.83□□□□□ -1
COPB1-202ENST00000439561 CRATP43155 626 aa8.83□□□□□ -1
COPB1-202ENST00000439561 KIR3DL1P43629 444 aa8.83□□□□□ -1
COPB1-202ENST00000439561 CLK3P49761 638 aaKnown RBP8.83□□□□□ -1
COPB1-202ENST00000439561 DAPP51397 102 aa8.83□□□□□ -1
COPB1-202ENST00000439561 CDH12P55289 794 aa8.83□□□□□ -1
COPB1-202ENST00000439561 RPS24P62847 133 aaKnown RBP8.83□□□□□ -1
COPB1-202ENST00000439561 IL10RBQ08334 325 aa8.83□□□□□ -1
COPB1-202ENST00000439561 TSTQ16762 297 aaKnown RBP8.83□□□□□ -1
COPB1-202ENST00000439561 ZNF181Q2M3W8 571 aa8.83□□□□□ -1
COPB1-202ENST00000439561 PDZK1Q5T2W1 519 aa8.83□□□□□ -1
COPB1-202ENST00000439561 ZNF517Q6ZMY9 492 aaPredicted RBP8.83□□□□□ -1
COPB1-202ENST00000439561 MON1AQ86VX9 555 aa8.83□□□□□ -1
COPB1-202ENST00000439561 DEPDC4Q8N2C3 294 aa8.83□□□□□ -1
COPB1-202ENST00000439561 ZNF675Q8TD23 568 aa8.83□□□□□ -1
COPB1-202ENST00000439561 MTERF3Q96E29 417 aa8.83□□□□□ -1
COPB1-202ENST00000439561 PSD2Q9BQI7 771 aa8.83□□□□□ -1
COPB1-202ENST00000439561 DYRK4Q9NR20 520 aa8.83□□□□□ -1
COPB1-202ENST00000439561 OLA1Q9NTK5 396 aaKnown RBP8.83□□□□□ -1
COPB1-202ENST00000439561 TMEM161AQ9NX61 479 aa8.83□□□□□ -1
COPB1-202ENST00000439561 AGO1Q9UL18 857 aaKnown RBP8.83□□□□□ -1
COPB1-202ENST00000439561 PCDHGB6Q9Y5F9 930 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms