RNA–Protein interactions for RNA: ENST00000439286.5

GARNL3-206, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-206ENST00000439286 LINC01555Q8NAE3 123 aa13□□□□□ -0.33
GARNL3-206ENST00000439286 SPC24Q8NBT2 197 aa13□□□□□ -0.33
GARNL3-206ENST00000439286 SNRNP40Q96DI7 357 aaKnown RBP13□□□□□ -0.33
GARNL3-206ENST00000439286 IL17FQ96PD4 163 aa13□□□□□ -0.33
GARNL3-206ENST00000439286 SELENOSQ9BQE4 189 aa13□□□□□ -0.33
GARNL3-206ENST00000439286 MRM3Q9HC36 420 aaKnown RBP13□□□□□ -0.33
GARNL3-206ENST00000439286 CHRAC1Q9NRG0 131 aa13□□□□□ -0.33
GARNL3-206ENST00000439286 AGPAT4Q9NRZ5 378 aa13□□□□□ -0.33
GARNL3-206ENST00000439286 CUTCQ9NTM9 273 aa13□□□□□ -0.33
GARNL3-206ENST00000439286 TTC7AQ9ULT0 858 aaPredicted RBP13□□□□□ -0.33
GARNL3-206ENST00000439286 GUCA1BQ9UMX6 200 aa13□□□□□ -0.33
GARNL3-206ENST00000439286 COPG1Q9Y678 874 aaKnown RBP13□□□□□ -0.33
GARNL3-206ENST00000439286 CAPN6Q9Y6Q1 641 aa13□□□□□ -0.33
GARNL3-206ENST00000439286 FAM169AQ9Y6X4 670 aa13□□□□□ -0.33
GARNL3-206ENST00000439286 DSCR3O14972 297 aa12.99□□□□□ -0.33
GARNL3-206ENST00000439286 SRPX2O60687 465 aaPredicted RBP12.99□□□□□ -0.33
GARNL3-206ENST00000439286 SEMA7AO75326 666 aa12.99□□□□□ -0.33
GARNL3-206ENST00000439286 UMODP07911 640 aa12.99□□□□□ -0.33
GARNL3-206ENST00000439286 ETS1P14921 441 aa12.99□□□□□ -0.33
GARNL3-206ENST00000439286 CCNFP41002 786 aa12.99□□□□□ -0.33
GARNL3-206ENST00000439286 GRIA3P42263 894 aa12.99□□□□□ -0.33
GARNL3-206ENST00000439286 NPY2RP49146 381 aa12.99□□□□□ -0.33
GARNL3-206ENST00000439286 SOX8P57073 446 aa12.99□□□□□ -0.33
GARNL3-206ENST00000439286 BASP1P80723 227 aaKnown RBP12.99□□□□□ -0.33
GARNL3-206ENST00000439286 SEMA3AQ14563 771 aa12.99□□□□□ -0.33
GARNL3-206ENST00000439286 NAA25Q14CX7 972 aa12.99□□□□□ -0.33
GARNL3-206ENST00000439286 NR6A1Q15406 480 aa12.99□□□□□ -0.33
GARNL3-206ENST00000439286 AGAP7PQ5VUJ5 663 aa12.99□□□□□ -0.33
GARNL3-206ENST00000439286 MRNIPQ6NTE8 343 aa12.99□□□□□ -0.33
GARNL3-206ENST00000439286 PPP1R32Q7Z5V6 425 aa12.99□□□□□ -0.33
GARNL3-206ENST00000439286 MPP5Q8N3R9 675 aa12.99□□□□□ -0.33
GARNL3-206ENST00000439286 MAIP1Q8WWC4 291 aa12.99□□□□□ -0.33
GARNL3-206ENST00000439286 C19orf60Q96EN9 201 aa12.99□□□□□ -0.33
GARNL3-206ENST00000439286 AGAP4Q96P64 663 aa12.99□□□□□ -0.33
GARNL3-206ENST00000439286 IL22Q9GZX6 179 aa12.99□□□□□ -0.33
GARNL3-206ENST00000439286 ZNF552Q9H707 407 aaPredicted RBP12.99□□□□□ -0.33
GARNL3-206ENST00000439286 WDR54Q9H977 334 aa12.99□□□□□ -0.33
GARNL3-206ENST00000439286 ASF1BQ9NVP2 202 aa12.99□□□□□ -0.33
GARNL3-206ENST00000439286 DRG1Q9Y295 367 aaKnown RBP12.99□□□□□ -0.33
GARNL3-206ENST00000439286 A0A0U1RQJ8 604 aa12.98□□□□□ -0.33
GARNL3-206ENST00000439286 ERVK-10P10266 1014 aa12.98□□□□□ -0.33
GARNL3-206ENST00000439286 RPL22P35268 128 aaKnown RBP12.98□□□□□ -0.33
GARNL3-206ENST00000439286 CARSP49589 748 aaKnown RBP12.98□□□□□ -0.33
GARNL3-206ENST00000439286 EIF3BP55884 814 aaKnown RBP12.98□□□□□ -0.33
GARNL3-206ENST00000439286 OCA2Q04671 838 aa12.98□□□□□ -0.33
GARNL3-206ENST00000439286 RBBP7Q16576 425 aa12.98□□□□□ -0.33
GARNL3-206ENST00000439286 CCNG2Q16589 344 aa12.98□□□□□ -0.33
GARNL3-206ENST00000439286 RNF187Q5TA31 235 aaPredicted RBP12.98□□□□□ -0.33
GARNL3-206ENST00000439286 PRAMEF13Q5VWM6 474 aa12.98□□□□□ -0.33
GARNL3-206ENST00000439286 PRUNE1Q86TP1 453 aa12.98□□□□□ -0.33
GARNL3-206ENST00000439286 TMEM139Q8IV31 216 aa12.98□□□□□ -0.33
GARNL3-206ENST00000439286 LKAAEAR1Q8TD35 194 aa12.98□□□□□ -0.33
GARNL3-206ENST00000439286 COG1Q8WTW3 980 aa12.98□□□□□ -0.33
GARNL3-206ENST00000439286 EPS8L2Q9H6S3 715 aa12.98□□□□□ -0.33
GARNL3-206ENST00000439286 EIF2B3Q9NR50 452 aaKnown RBP12.98□□□□□ -0.33
GARNL3-206ENST00000439286 FBXL4Q9UKA2 621 aa12.98□□□□□ -0.33
GARNL3-206ENST00000439286 A1L4Q6 167 aa12.97□□□□□ -0.33
GARNL3-206ENST00000439286 HYKKA2RU49 373 aa12.97□□□□□ -0.33
GARNL3-206ENST00000439286 ANKUB1A6NFN9 424 aa12.97□□□□□ -0.33
GARNL3-206ENST00000439286 H3BMM5 538 aa12.97□□□□□ -0.33
GARNL3-206ENST00000439286 CNOT3O75175 753 aaKnown RBP12.97□□□□□ -0.33
GARNL3-206ENST00000439286 C1orf105O95561 183 aa12.97□□□□□ -0.33
GARNL3-206ENST00000439286 EIF2S1P05198 315 aaKnown RBP12.97□□□□□ -0.33
GARNL3-206ENST00000439286 ZSCAN5DPP0CG00 497 aa12.97□□□□□ -0.33
GARNL3-206ENST00000439286 CHRM3P20309 590 aa12.97□□□□□ -0.33
GARNL3-206ENST00000439286 RPS3P23396 243 aaKnown RBP eCLIP12.97□□□□□ -0.33
GARNL3-206ENST00000439286 CMPK1P30085 196 aa12.97□□□□□ -0.33
GARNL3-206ENST00000439286 VSX2P58304 361 aaPredicted RBP12.97□□□□□ -0.33
GARNL3-206ENST00000439286 SARNPP82979 210 aaKnown RBP12.97□□□□□ -0.33
GARNL3-206ENST00000439286 NKG7Q16617 165 aa12.97□□□□□ -0.33
GARNL3-206ENST00000439286 TUBB8Q3ZCM7 444 aa12.97□□□□□ -0.33
GARNL3-206ENST00000439286 WASHC2DQ5SRD0 308 aa12.97□□□□□ -0.33
GARNL3-206ENST00000439286 FCRL6Q6DN72 434 aa12.97□□□□□ -0.33
GARNL3-206ENST00000439286 CNSTQ6PJW8 725 aa12.97□□□□□ -0.33
GARNL3-206ENST00000439286 LMNTD1Q8N9Z9 388 aa12.97□□□□□ -0.33
GARNL3-206ENST00000439286 DNAJB14Q8TBM8 379 aa12.97□□□□□ -0.33
GARNL3-206ENST00000439286 C5orf34Q96MH7 638 aa12.97□□□□□ -0.33
GARNL3-206ENST00000439286 MIPEPQ99797 713 aa12.97□□□□□ -0.33
GARNL3-206ENST00000439286 WDR77Q9BQA1 342 aaPredicted RBP12.97□□□□□ -0.33
GARNL3-206ENST00000439286 MENTQ9BUN1 341 aa12.97□□□□□ -0.33
GARNL3-206ENST00000439286 SLC26A1Q9H2B4 701 aa12.97□□□□□ -0.33
GARNL3-206ENST00000439286 SOX17Q9H6I2 414 aaPredicted RBP12.97□□□□□ -0.33
GARNL3-206ENST00000439286 ZNF304Q9HCX3 659 aa12.97□□□□□ -0.33
GARNL3-206ENST00000439286 SLC6A20Q9NP91 592 aa12.97□□□□□ -0.33
GARNL3-206ENST00000439286 SEMA3GQ9NS98 782 aa12.97□□□□□ -0.33
GARNL3-206ENST00000439286 SLC22A11Q9NSA0 550 aa12.97□□□□□ -0.33
GARNL3-206ENST00000439286 UTP6Q9NYH9 597 aaKnown RBP12.97□□□□□ -0.33
GARNL3-206ENST00000439286 MARCH4Q9P2E8 410 aaPredicted RBP12.97□□□□□ -0.33
GARNL3-206ENST00000439286 ZC3H7BQ9UGR2 993 aaKnown RBP12.97□□□□□ -0.33
GARNL3-206ENST00000439286 ZKSCAN5Q9Y2L8 839 aa12.97□□□□□ -0.33
GARNL3-206ENST00000439286 ZNF106Q9H2Y7 1883 aaKnown RBP12.96□□□□□ -0.33
GARNL3-206ENST00000439286 VAPBO95292 243 aa12.96□□□□□ -0.33
GARNL3-206ENST00000439286 CBX6O95503 412 aa12.96□□□□□ -0.33
GARNL3-206ENST00000439286 ONECUT2O95948 504 aa12.96□□□□□ -0.33
GARNL3-206ENST00000439286 PAMP19021 973 aa12.96□□□□□ -0.33
GARNL3-206ENST00000439286 MCM3P25205 808 aa12.96□□□□□ -0.33
GARNL3-206ENST00000439286 CDC25BP30305 580 aa12.96□□□□□ -0.33
GARNL3-206ENST00000439286 FMO4P31512 558 aa12.96□□□□□ -0.33
GARNL3-206ENST00000439286 BDKRB1P46663 353 aa12.96□□□□□ -0.33
GARNL3-206ENST00000439286 OR1D4P47884 311 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms