RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 ACAD8Q9UKU7 415 aa2.61□□□□□ -1.99
HMGB1P18-201ENST00000438801 MRPS28Q9Y2Q9 187 aaKnown RBP2.61□□□□□ -1.99
HMGB1P18-201ENST00000438801 JRKLQ9Y4A0 524 aa2.61□□□□□ -1.99
HMGB1P18-201ENST00000438801 PCDHGB3Q9Y5G1 929 aa2.61□□□□□ -1.99
HMGB1P18-201ENST00000438801 TET1Q8NFU7 2136 aa2.6□□□□□ -1.99
HMGB1P18-201ENST00000438801 LRRK1Q38SD2 2015 aa2.6□□□□□ -1.99
HMGB1P18-201ENST00000438801 A0A0U1RQG5 324 aaPredicted RBP2.6□□□□□ -1.99
HMGB1P18-201ENST00000438801 A0A1W2PPI3 338 aa2.6□□□□□ -1.99
HMGB1P18-201ENST00000438801 OR5K3A6NET4 321 aa2.6□□□□□ -1.99
HMGB1P18-201ENST00000438801 HS3ST1O14792 307 aa2.6□□□□□ -1.99
HMGB1P18-201ENST00000438801 CLIC2O15247 247 aa2.6□□□□□ -1.99
HMGB1P18-201ENST00000438801 KCNN4O15554 427 aa2.6□□□□□ -1.99
HMGB1P18-201ENST00000438801 HTATSF1O43719 755 aaKnown RBP2.6□□□□□ -1.99
HMGB1P18-201ENST00000438801 PDE9AO76083 593 aa2.6□□□□□ -1.99
HMGB1P18-201ENST00000438801 TSHBP01222 138 aa2.6□□□□□ -1.99
HMGB1P18-201ENST00000438801 HLA-EP13747 358 aa2.6□□□□□ -1.99
HMGB1P18-201ENST00000438801 CDAP32320 146 aa2.6□□□□□ -1.99
HMGB1P18-201ENST00000438801 CTNNB1P35222 781 aa2.6□□□□□ -1.99
HMGB1P18-201ENST00000438801 APOBEC1P41238 236 aaKnown RBP2.6□□□□□ -1.99
HMGB1P18-201ENST00000438801 MAGEA9P43362 315 aa2.6□□□□□ -1.99
HMGB1P18-201ENST00000438801 CCR5P51681 352 aa2.6□□□□□ -1.99
HMGB1P18-201ENST00000438801 UCNP55089 124 aa2.6□□□□□ -1.99
HMGB1P18-201ENST00000438801 SPOCK1Q08629 439 aa2.6□□□□□ -1.99
HMGB1P18-201ENST00000438801 DRAP1Q14919 205 aaPredicted RBP2.6□□□□□ -1.99
HMGB1P18-201ENST00000438801 KIR2DS3Q14952 304 aa2.6□□□□□ -1.99
HMGB1P18-201ENST00000438801 SPINK14Q6IE38 97 aa2.6□□□□□ -1.99
HMGB1P18-201ENST00000438801 FAAP20Q6NZ36 180 aa2.6□□□□□ -1.99
HMGB1P18-201ENST00000438801 DPPA4Q7L190 304 aa2.6□□□□□ -1.99
HMGB1P18-201ENST00000438801 TIPARPQ7Z3E1 657 aaKnown RBP2.6□□□□□ -1.99
HMGB1P18-201ENST00000438801 ADGRD2Q7Z7M1 963 aa2.6□□□□□ -1.99
HMGB1P18-201ENST00000438801 ZNF440Q8IYI8 595 aa2.6□□□□□ -1.99
HMGB1P18-201ENST00000438801 RBM15BQ8NDT2 890 aaKnown RBP2.6□□□□□ -1.99
HMGB1P18-201ENST00000438801 DDHD1Q8NEL9 900 aa2.6□□□□□ -1.99
HMGB1P18-201ENST00000438801 TDRD7Q8NHU6 1098 aaKnown RBP2.6□□□□□ -1.99
HMGB1P18-201ENST00000438801 ZCCHC10Q8TBK6 192 aa2.6□□□□□ -1.99
HMGB1P18-201ENST00000438801 PHF21AQ96BD5 680 aa2.6□□□□□ -1.99
HMGB1P18-201ENST00000438801 HVCN1Q96D96 273 aa2.6□□□□□ -1.99
HMGB1P18-201ENST00000438801 TMEM47Q9BQJ4 181 aa2.6□□□□□ -1.99
HMGB1P18-201ENST00000438801 PCGF1Q9BSM1 259 aa2.6□□□□□ -1.99
HMGB1P18-201ENST00000438801 RIC8AQ9NPQ8 531 aa2.6□□□□□ -1.99
HMGB1P18-201ENST00000438801 SLC7A10Q9NS82 523 aa2.6□□□□□ -1.99
HMGB1P18-201ENST00000438801 ARMCX1Q9P291 453 aa2.6□□□□□ -1.99
HMGB1P18-201ENST00000438801 CACNG5Q9UF02 275 aa2.6□□□□□ -1.99
HMGB1P18-201ENST00000438801 POLLQ9UGP5 575 aa2.6□□□□□ -1.99
HMGB1P18-201ENST00000438801 RASAL2Q9UJF2 1139 aa2.6□□□□□ -1.99
HMGB1P18-201ENST00000438801 AAR2Q9Y312 384 aaKnown RBP2.6□□□□□ -1.99
HMGB1P18-201ENST00000438801 CLSPNQ9HAW4 1339 aa2.6□□□□□ -1.99
HMGB1P18-201ENST00000438801 SHANK1Q9Y566 2161 aa2.6□□□□□ -1.99
HMGB1P18-201ENST00000438801 ZNF236Q9UL36 1845 aa2.59□□□□□ -1.99
HMGB1P18-201ENST00000438801 C5orf60A6NFR6 353 aa2.59□□□□□ -1.99
HMGB1P18-201ENST00000438801 TTC36A6NLP5 189 aa2.59□□□□□ -1.99
HMGB1P18-201ENST00000438801 DUXAA6NLW8 204 aa2.59□□□□□ -1.99
HMGB1P18-201ENST00000438801 FAM90A26D6RGX4 464 aa2.59□□□□□ -1.99
HMGB1P18-201ENST00000438801 CDX4O14627 284 aaPredicted RBP2.59□□□□□ -1.99
HMGB1P18-201ENST00000438801 ANKRD28O15084 1053 aa2.59□□□□□ -1.99
HMGB1P18-201ENST00000438801 N4BP1O75113 896 aaKnown RBP2.59□□□□□ -1.99
HMGB1P18-201ENST00000438801 SORBS2O94875 1100 aaKnown RBP2.59□□□□□ -1.99
HMGB1P18-201ENST00000438801 VENTXO95231 258 aa2.59□□□□□ -1.99
HMGB1P18-201ENST00000438801 CD4P01730 458 aa2.59□□□□□ -1.99
HMGB1P18-201ENST00000438801 IFIT1P09914 478 aaKnown RBP2.59□□□□□ -1.99
HMGB1P18-201ENST00000438801 MAPK4P31152 587 aa2.59□□□□□ -1.99
HMGB1P18-201ENST00000438801 UBA7P41226 1012 aa2.59□□□□□ -1.99
HMGB1P18-201ENST00000438801 MBTD1Q05BQ5 628 aa2.59□□□□□ -1.99
HMGB1P18-201ENST00000438801 MAD2L1Q13257 205 aaPredicted RBP2.59□□□□□ -1.99
HMGB1P18-201ENST00000438801 CAMK1Q14012 370 aa2.59□□□□□ -1.99
HMGB1P18-201ENST00000438801 SLC9B1Q4ZJI4 515 aa2.59□□□□□ -1.99
HMGB1P18-201ENST00000438801 TCTE1Q5JU00 501 aa2.59□□□□□ -1.99
HMGB1P18-201ENST00000438801 C10orf62Q5T681 223 aaPredicted RBP2.59□□□□□ -1.99
HMGB1P18-201ENST00000438801 GPR142Q7Z601 462 aa2.59□□□□□ -1.99
HMGB1P18-201ENST00000438801 CPOQ8IVL8 374 aa2.59□□□□□ -1.99
HMGB1P18-201ENST00000438801 CCDC13Q8IYE1 715 aa2.59□□□□□ -1.99
HMGB1P18-201ENST00000438801 NKAPQ8N5F7 415 aaKnown RBP2.59□□□□□ -1.99
HMGB1P18-201ENST00000438801 PDCD6IPQ8WUM4 868 aaKnown RBP2.59□□□□□ -1.99
HMGB1P18-201ENST00000438801 DNAAF4Q8WXU2 420 aa2.59□□□□□ -1.99
HMGB1P18-201ENST00000438801 NXPE2Q96DL1 559 aa2.59□□□□□ -1.99
HMGB1P18-201ENST00000438801 ZBED3Q96IU2 234 aaPredicted RBP2.59□□□□□ -1.99
HMGB1P18-201ENST00000438801 NECTIN4Q96NY8 510 aa2.59□□□□□ -1.99
HMGB1P18-201ENST00000438801 ACOX2Q99424 681 aa2.59□□□□□ -1.99
HMGB1P18-201ENST00000438801 LGMNQ99538 433 aa2.59□□□□□ -1.99
HMGB1P18-201ENST00000438801 FUZQ9BT04 418 aa2.59□□□□□ -1.99
HMGB1P18-201ENST00000438801 USP44Q9H0E7 712 aa2.59□□□□□ -1.99
HMGB1P18-201ENST00000438801 ZBTB20Q9HC78 741 aaPredicted RBP2.59□□□□□ -1.99
HMGB1P18-201ENST00000438801 MPP6Q9NZW5 540 aa2.59□□□□□ -1.99
HMGB1P18-201ENST00000438801 PCDHGA5Q9Y5G8 931 aa2.59□□□□□ -1.99
HMGB1P18-201ENST00000438801 ELP1O95163 1332 aa2.59□□□□□ -2
HMGB1P18-201ENST00000438801 MYO3BQ8WXR4 1341 aa2.59□□□□□ -2
HMGB1P18-201ENST00000438801 IGKV6D-41A0A0C4DH26 115 aa2.58□□□□□ -2
HMGB1P18-201ENST00000438801 A0A1W2PP11 408 aa2.58□□□□□ -2
HMGB1P18-201ENST00000438801 KANSL1LA0AUZ9 987 aa2.58□□□□□ -2
HMGB1P18-201ENST00000438801 A6NL46 340 aa2.58□□□□□ -2
HMGB1P18-201ENST00000438801 H7C423 109 aa2.58□□□□□ -2
HMGB1P18-201ENST00000438801 CXCL11O14625 94 aa2.58□□□□□ -2
HMGB1P18-201ENST00000438801 LDLRAD4O15165 306 aa2.58□□□□□ -2
HMGB1P18-201ENST00000438801 NBNO60934 754 aa2.58□□□□□ -2
HMGB1P18-201ENST00000438801 STARD3NLO95772 234 aa2.58□□□□□ -2
HMGB1P18-201ENST00000438801 TDGF1P13385 188 aa2.58□□□□□ -2
HMGB1P18-201ENST00000438801 KLK2P20151 261 aa2.58□□□□□ -2
HMGB1P18-201ENST00000438801 MSH3P20585 1137 aa2.58□□□□□ -2
HMGB1P18-201ENST00000438801 MCCP23508 829 aa2.58□□□□□ -2
HMGB1P18-201ENST00000438801 NR2F2P24468 414 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms