RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 DGLUCYQ7Z3D6 616 aa3.12□□□□□ -1.91
HMGB3P12-201ENST00000438745 FAM72BQ86X60 149 aa3.12□□□□□ -1.91
HMGB3P12-201ENST00000438745 MCEMP1Q8IX19 187 aa3.12□□□□□ -1.91
HMGB3P12-201ENST00000438745 MINDY1Q8N5J2 469 aa3.12□□□□□ -1.91
HMGB3P12-201ENST00000438745 DMBX1Q8NFW5 382 aa3.12□□□□□ -1.91
HMGB3P12-201ENST00000438745 WDR20Q8TBZ3 569 aa3.12□□□□□ -1.91
HMGB3P12-201ENST00000438745 LPGAT1Q92604 370 aa3.12□□□□□ -1.91
HMGB3P12-201ENST00000438745 ERP27Q96DN0 273 aa3.12□□□□□ -1.91
HMGB3P12-201ENST00000438745 LINGO1Q96FE5 620 aa3.12□□□□□ -1.91
HMGB3P12-201ENST00000438745 COG3Q96JB2 828 aa3.12□□□□□ -1.91
HMGB3P12-201ENST00000438745 ZNF582Q96NG8 517 aaPredicted RBP3.12□□□□□ -1.91
HMGB3P12-201ENST00000438745 POLR3CQ9BUI4 534 aaPredicted RBP3.12□□□□□ -1.91
HMGB3P12-201ENST00000438745 CCDC106Q9BWC9 280 aa3.12□□□□□ -1.91
HMGB3P12-201ENST00000438745 SPATC1LQ9H0A9 340 aa3.12□□□□□ -1.91
HMGB3P12-201ENST00000438745 PPIL3Q9H2H8 161 aaKnown RBP3.12□□□□□ -1.91
HMGB3P12-201ENST00000438745 KCNK15Q9H427 330 aa3.12□□□□□ -1.91
HMGB3P12-201ENST00000438745 GOLPH3LQ9H4A5 285 aa3.12□□□□□ -1.91
HMGB3P12-201ENST00000438745 C11orf49Q9H6J7 331 aa3.12□□□□□ -1.91
HMGB3P12-201ENST00000438745 MBNL1Q9NR56 388 aaKnown RBP3.12□□□□□ -1.91
HMGB3P12-201ENST00000438745 TRMT1Q9NXH9 659 aaKnown RBP3.12□□□□□ -1.91
HMGB3P12-201ENST00000438745 TAB2Q9NYJ8 693 aa3.12□□□□□ -1.91
HMGB3P12-201ENST00000438745 PTTG2Q9NZH5 202 aa3.12□□□□□ -1.91
HMGB3P12-201ENST00000438745 RCC2Q9P258 522 aaKnown RBP3.12□□□□□ -1.91
HMGB3P12-201ENST00000438745 MARCH4Q9P2E8 410 aaPredicted RBP3.12□□□□□ -1.91
HMGB3P12-201ENST00000438745 POLG2Q9UHN1 485 aa3.12□□□□□ -1.91
HMGB3P12-201ENST00000438745 NRBP1Q9UHY1 535 aa3.12□□□□□ -1.91
HMGB3P12-201ENST00000438745 EVC2Q86UK5 1308 aa3.12□□□□□ -1.91
HMGB3P12-201ENST00000438745 MUC3AQ02505 3323 aa3.12□□□□□ -1.91
HMGB3P12-201ENST00000438745 ITGB4P16144 1822 aa3.12□□□□□ -1.91
HMGB3P12-201ENST00000438745 CACNA1SQ13698 1873 aa3.11□□□□□ -1.91
HMGB3P12-201ENST00000438745 RIC1Q4ADV7 1423 aa3.11□□□□□ -1.91
HMGB3P12-201ENST00000438745 COL2A1P02458 1487 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P12-201ENST00000438745 ANKRD26Q9UPS8 1709 aa3.11□□□□□ -1.91
HMGB3P12-201ENST00000438745 ATRXP46100 2492 aa3.11□□□□□ -1.91
HMGB3P12-201ENST00000438745 GPR75-ASB3A0A0A6YYF3 556 aa3.11□□□□□ -1.91
HMGB3P12-201ENST00000438745 OR2M5A3KFT3 312 aa3.11□□□□□ -1.91
HMGB3P12-201ENST00000438745 GLOD5A6NK44 160 aa3.11□□□□□ -1.91
HMGB3P12-201ENST00000438745 MAGEB17A8MXT2 336 aa3.11□□□□□ -1.91
HMGB3P12-201ENST00000438745 CAPN9O14815 690 aa3.11□□□□□ -1.91
HMGB3P12-201ENST00000438745 NDUFS4O43181 175 aa3.11□□□□□ -1.91
HMGB3P12-201ENST00000438745 TIMM44O43615 452 aa3.11□□□□□ -1.91
HMGB3P12-201ENST00000438745 WISP2O76076 250 aa3.11□□□□□ -1.91
HMGB3P12-201ENST00000438745 HSP90AA1P07900 732 aaKnown RBP3.11□□□□□ -1.91
HMGB3P12-201ENST00000438745 ABCB1P08183 1280 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P12-201ENST00000438745 FAM106CPP0CH98 169 aa3.11□□□□□ -1.91
HMGB3P12-201ENST00000438745 VPREB1P12018 145 aa3.11□□□□□ -1.91
HMGB3P12-201ENST00000438745 NR1D1P20393 614 aa3.11□□□□□ -1.91
HMGB3P12-201ENST00000438745 RPS12P25398 132 aaKnown RBP3.11□□□□□ -1.91
HMGB3P12-201ENST00000438745 PSMC4P43686 418 aa3.11□□□□□ -1.91
HMGB3P12-201ENST00000438745 FMO5P49326 533 aa3.11□□□□□ -1.91
HMGB3P12-201ENST00000438745 ARSEP51690 589 aa3.11□□□□□ -1.91
HMGB3P12-201ENST00000438745 CTSCP53634 463 aa3.11□□□□□ -1.91
HMGB3P12-201ENST00000438745 RUNX1T1Q06455 604 aa3.11□□□□□ -1.91
HMGB3P12-201ENST00000438745 SHHQ15465 462 aa3.11□□□□□ -1.91
HMGB3P12-201ENST00000438745 C15orf59Q2T9L4 293 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P12-201ENST00000438745 LETM2Q2VYF4 491 aa3.11□□□□□ -1.91
HMGB3P12-201ENST00000438745 CEP85LQ5SZL2 805 aa3.11□□□□□ -1.91
HMGB3P12-201ENST00000438745 LCE1FQ5T754 118 aa3.11□□□□□ -1.91
HMGB3P12-201ENST00000438745 NAA16Q6N069 864 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P12-201ENST00000438745 SYT2Q8N9I0 419 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P12-201ENST00000438745 RBM15BQ8NDT2 890 aaKnown RBP3.11□□□□□ -1.91
HMGB3P12-201ENST00000438745 KLHDC9Q8NEP7 349 aa3.11□□□□□ -1.91
HMGB3P12-201ENST00000438745 SLC24A4Q8NFF2 622 aa3.11□□□□□ -1.91
HMGB3P12-201ENST00000438745 PTPMT1Q8WUK0 201 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P12-201ENST00000438745 TMEM255BQ8WV15 326 aa3.11□□□□□ -1.91
HMGB3P12-201ENST00000438745 ERLEC1Q96DZ1 483 aa3.11□□□□□ -1.91
HMGB3P12-201ENST00000438745 FBXO17Q96EF6 278 aa3.11□□□□□ -1.91
HMGB3P12-201ENST00000438745 ALG14Q96F25 216 aa3.11□□□□□ -1.91
HMGB3P12-201ENST00000438745 PRMT6Q96LA8 375 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P12-201ENST00000438745 FAM81BQ96LP2 452 aa3.11□□□□□ -1.91
HMGB3P12-201ENST00000438745 NEURL2Q9BR09 285 aa3.11□□□□□ -1.91
HMGB3P12-201ENST00000438745 DENND2DQ9H6A0 471 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P12-201ENST00000438745 TBC1D17Q9HA65 648 aa3.11□□□□□ -1.91
HMGB3P12-201ENST00000438745 SLC35C2Q9NQQ7 365 aa3.11□□□□□ -1.91
HMGB3P12-201ENST00000438745 AMACRQ9UHK6 382 aa3.11□□□□□ -1.91
HMGB3P12-201ENST00000438745 TMEM184BQ9Y519 407 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P12-201ENST00000438745 TRPV2Q9Y5S1 764 aa3.11□□□□□ -1.91
HMGB3P12-201ENST00000438745 ZDBF2Q9HCK1 2354 aa3.11□□□□□ -1.91
HMGB3P12-201ENST00000438745 ASTN2O75129 1339 aaPredicted RBP3.11□□□□□ -1.91
HMGB3P12-201ENST00000438745 RTL1A6NKG5 1358 aa3.11□□□□□ -1.91
HMGB3P12-201ENST00000438745 COL5A3P25940 1745 aaPredicted RBP3.1□□□□□ -1.91
HMGB3P12-201ENST00000438745 CENPFP49454 3210 aa3.1□□□□□ -1.91
HMGB3P12-201ENST00000438745 ANKRD31Q8N7Z5 1873 aa3.1□□□□□ -1.91
HMGB3P12-201ENST00000438745 LOC100509620A0A075B734 347 aa3.1□□□□□ -1.91
HMGB3P12-201ENST00000438745 ZCWPW2A0A1B0GU75 182 aa3.1□□□□□ -1.91
HMGB3P12-201ENST00000438745 PSMD14O00487 310 aa3.1□□□□□ -1.91
HMGB3P12-201ENST00000438745 IPO8O15397 1037 aaKnown RBP3.1□□□□□ -1.91
HMGB3P12-201ENST00000438745 SYNCRIPO60506 623 aaKnown RBP3.1□□□□□ -1.91
HMGB3P12-201ENST00000438745 PSMD10O75832 226 aa3.1□□□□□ -1.91
HMGB3P12-201ENST00000438745 GCNT3O95395 438 aa3.1□□□□□ -1.91
HMGB3P12-201ENST00000438745 LIPFP07098 398 aa3.1□□□□□ -1.91
HMGB3P12-201ENST00000438745 TPOP07202 933 aa3.1□□□□□ -1.91
HMGB3P12-201ENST00000438745 IL11P20809 199 aa3.1□□□□□ -1.91
HMGB3P12-201ENST00000438745 DCTP40126 519 aa3.1□□□□□ -1.91
HMGB3P12-201ENST00000438745 CAPZA2P47755 286 aa3.1□□□□□ -1.91
HMGB3P12-201ENST00000438745 ARCN1P48444 511 aaKnown RBP3.1□□□□□ -1.91
HMGB3P12-201ENST00000438745 HOXA1P49639 335 aaPredicted RBP3.1□□□□□ -1.91
HMGB3P12-201ENST00000438745 CDH13P55290 713 aa3.1□□□□□ -1.91
HMGB3P12-201ENST00000438745 RPL24P83731 157 aaKnown RBP3.1□□□□□ -1.91
HMGB3P12-201ENST00000438745 PRKAA1Q13131 559 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms