RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 KRT33BQ14525 404 aa10.44□□□□□ -0.74
RTN4-211ENST00000438462 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.44□□□□□ -0.74
RTN4-211ENST00000438462 BTLAQ7Z6A9 289 aa10.44□□□□□ -0.74
RTN4-211ENST00000438462 SULF2Q8IWU5 870 aa10.44□□□□□ -0.74
RTN4-211ENST00000438462 ELOA2Q8IYF1 753 aaPredicted RBP10.44□□□□□ -0.74
RTN4-211ENST00000438462 EMC1Q8N766 993 aa10.44□□□□□ -0.74
RTN4-211ENST00000438462 PIK3IP1Q96FE7 263 aa10.44□□□□□ -0.74
RTN4-211ENST00000438462 ZSCAN31Q96LW9 406 aaPredicted RBP10.44□□□□□ -0.74
RTN4-211ENST00000438462 PIGQQ9BRB3 760 aa10.44□□□□□ -0.74
RTN4-211ENST00000438462 NUP85Q9BW27 656 aa10.44□□□□□ -0.74
RTN4-211ENST00000438462 PSD3Q9NYI0 1048 aa10.44□□□□□ -0.74
RTN4-211ENST00000438462 KLF13Q9Y2Y9 288 aaPredicted RBP10.44□□□□□ -0.74
RTN4-211ENST00000438462 LIPGQ9Y5X9 500 aa10.44□□□□□ -0.74
RTN4-211ENST00000438462 HYDINQ4G0P3 5121 aa10.43□□□□□ -0.74
RTN4-211ENST00000438462 LOC100653049A0A140TA62 436 aa10.43□□□□□ -0.74
RTN4-211ENST00000438462 DEFB108AA8MXU0 73 aa10.43□□□□□ -0.74
RTN4-211ENST00000438462 EEF1E1-BLOC1S5C9J1V9 151 aa10.43□□□□□ -0.74
RTN4-211ENST00000438462 C3orf80F5H4A9 247 aa10.43□□□□□ -0.74
RTN4-211ENST00000438462 DFFAO00273 331 aa10.43□□□□□ -0.74
RTN4-211ENST00000438462 FFAR3O14843 346 aa10.43□□□□□ -0.74
RTN4-211ENST00000438462 GPR42O15529 346 aa10.43□□□□□ -0.74
RTN4-211ENST00000438462 EEF1E1O43324 174 aaKnown RBP10.43□□□□□ -0.74
RTN4-211ENST00000438462 KRT34O76011 436 aa10.43□□□□□ -0.74
RTN4-211ENST00000438462 UGT2B7P16662 529 aa10.43□□□□□ -0.74
RTN4-211ENST00000438462 TPH1P17752 444 aa10.43□□□□□ -0.74
RTN4-211ENST00000438462 DCDC1P59894 354 aa10.43□□□□□ -0.74
RTN4-211ENST00000438462 DSC2Q02487 901 aa10.43□□□□□ -0.74
RTN4-211ENST00000438462 IL10RBQ08334 325 aa10.43□□□□□ -0.74
RTN4-211ENST00000438462 TRIM14Q14142 442 aa10.43□□□□□ -0.74
RTN4-211ENST00000438462 ETFDHQ16134 617 aa10.43□□□□□ -0.74
RTN4-211ENST00000438462 CCDC14Q49A88 953 aa10.43□□□□□ -0.74
RTN4-211ENST00000438462 FIGNQ5HY92 759 aa10.43□□□□□ -0.74
RTN4-211ENST00000438462 FAM120AOSQ5T036 256 aa10.43□□□□□ -0.74
RTN4-211ENST00000438462 POMZP3Q6PJE2 187 aa10.43□□□□□ -0.74
RTN4-211ENST00000438462 SEM1Q6ZVN7 128 aa10.43□□□□□ -0.74
RTN4-211ENST00000438462 ZNF227Q86WZ6 799 aa10.43□□□□□ -0.74
RTN4-211ENST00000438462 ADGRF3Q8IZF5 1079 aa10.43□□□□□ -0.74
RTN4-211ENST00000438462 GPT2Q8TD30 523 aa10.43□□□□□ -0.74
RTN4-211ENST00000438462 ISL2Q96A47 359 aa10.43□□□□□ -0.74
RTN4-211ENST00000438462 RMDN2Q96LZ7 410 aa10.43□□□□□ -0.74
RTN4-211ENST00000438462 MGME1Q9BQP7 344 aa10.43□□□□□ -0.74
RTN4-211ENST00000438462 ZSCAN5AQ9BUG6 496 aa10.43□□□□□ -0.74
RTN4-211ENST00000438462 CNPPD1Q9BV87 410 aa10.43□□□□□ -0.74
RTN4-211ENST00000438462 ZNF304Q9HCX3 659 aa10.43□□□□□ -0.74
RTN4-211ENST00000438462 TRMT1Q9NXH9 659 aaKnown RBP10.43□□□□□ -0.74
RTN4-211ENST00000438462 ALKBH4Q9NXW9 302 aa10.43□□□□□ -0.74
RTN4-211ENST00000438462 IL1RAPL1Q9NZN1 696 aa10.43□□□□□ -0.74
RTN4-211ENST00000438462 PCDHGC3Q9UN70 934 aa10.43□□□□□ -0.74
RTN4-211ENST00000438462 COLEC10Q9Y6Z7 277 aa10.43□□□□□ -0.74
RTN4-211ENST00000438462 IGHV3-20A0A0C4DH32 117 aa10.42□□□□□ -0.74
RTN4-211ENST00000438462 CTIFO43310 598 aaKnown RBP10.42□□□□□ -0.74
RTN4-211ENST00000438462 LMX1BO60663 402 aa10.42□□□□□ -0.74
RTN4-211ENST00000438462 POP7O75817 140 aaKnown RBP10.42□□□□□ -0.74
RTN4-211ENST00000438462 HEXBP07686 556 aa10.42□□□□□ -0.74
RTN4-211ENST00000438462 SLC35G4P0C7Q5 338 aa10.42□□□□□ -0.74
RTN4-211ENST00000438462 ACVR1BP36896 505 aa10.42□□□□□ -0.74
RTN4-211ENST00000438462 FMO5P49326 533 aa10.42□□□□□ -0.74
RTN4-211ENST00000438462 GPR85P60893 370 aa10.42□□□□□ -0.74
RTN4-211ENST00000438462 ZCWPW2Q504Y3 356 aa10.42□□□□□ -0.74
RTN4-211ENST00000438462 PLAG1Q6DJT9 500 aa10.42□□□□□ -0.74
RTN4-211ENST00000438462 TRAM1L1Q8N609 369 aa10.42□□□□□ -0.74
RTN4-211ENST00000438462 GCDHQ92947 438 aaPredicted RBP10.42□□□□□ -0.74
RTN4-211ENST00000438462 SLC35C1Q96A29 364 aa10.42□□□□□ -0.74
RTN4-211ENST00000438462 HS3ST6Q96QI5 342 aa10.42□□□□□ -0.74
RTN4-211ENST00000438462 ZFYVE21Q9BQ24 234 aa10.42□□□□□ -0.74
RTN4-211ENST00000438462 XKR8Q9H6D3 395 aa10.42□□□□□ -0.74
RTN4-211ENST00000438462 CHODLQ9H9P2 273 aa10.42□□□□□ -0.74
RTN4-211ENST00000438462 TMEM59LQ9UK28 342 aa10.42□□□□□ -0.74
RTN4-211ENST00000438462 YLPM1P49750 1951 aaKnown RBP10.42□□□□□ -0.74
RTN4-211ENST00000438462 IGLV3-12A0A075B6K2 115 aa10.41□□□□□ -0.74
RTN4-211ENST00000438462 A0A0J9YY10 115 aa10.41□□□□□ -0.74
RTN4-211ENST00000438462 RGSL1A5PLK6 1076 aa10.41□□□□□ -0.74
RTN4-211ENST00000438462 ESPNB1AK53 854 aa10.41□□□□□ -0.74
RTN4-211ENST00000438462 KLRC4-KLRK1H3BQV0 150 aa10.41□□□□□ -0.74
RTN4-211ENST00000438462 DDX3XO00571 662 aaKnown RBP eCLIP10.41□□□□□ -0.74
RTN4-211ENST00000438462 SLC16A5O15375 505 aa10.41□□□□□ -0.74
RTN4-211ENST00000438462 FGF10O15520 208 aaPredicted RBP10.41□□□□□ -0.74
RTN4-211ENST00000438462 PEX1O43933 1283 aa10.41□□□□□ -0.74
RTN4-211ENST00000438462 ADAM11O75078 769 aa10.41□□□□□ -0.74
RTN4-211ENST00000438462 MED26O95402 600 aa10.41□□□□□ -0.74
RTN4-211ENST00000438462 RFC1P35251 1148 aaPredicted RBP10.41□□□□□ -0.74
RTN4-211ENST00000438462 IDUAP35475 653 aa10.41□□□□□ -0.74
RTN4-211ENST00000438462 HSPA9P38646 679 aaKnown RBP10.41□□□□□ -0.74
RTN4-211ENST00000438462 CCNFP41002 786 aa10.41□□□□□ -0.74
RTN4-211ENST00000438462 PRKCIP41743 596 aa10.41□□□□□ -0.74
RTN4-211ENST00000438462 ITGA8P53708 1063 aa10.41□□□□□ -0.74
RTN4-211ENST00000438462 VLDLRP98155 873 aa10.41□□□□□ -0.74
RTN4-211ENST00000438462 TMEM115Q12893 351 aaPredicted RBP10.41□□□□□ -0.74
RTN4-211ENST00000438462 GSE1Q14687 1217 aa10.41□□□□□ -0.74
RTN4-211ENST00000438462 GRM7Q14831 915 aa10.41□□□□□ -0.74
RTN4-211ENST00000438462 TAZQ16635 292 aa10.41□□□□□ -0.74
RTN4-211ENST00000438462 C2CD6Q53TS8 623 aa10.41□□□□□ -0.74
RTN4-211ENST00000438462 YOD1Q5VVQ6 348 aaPredicted RBP10.41□□□□□ -0.74
RTN4-211ENST00000438462 METRNLQ641Q3 311 aa10.41□□□□□ -0.74
RTN4-211ENST00000438462 VASNQ6EMK4 673 aa10.41□□□□□ -0.74
RTN4-211ENST00000438462 TMEM205Q6UW68 189 aa10.41□□□□□ -0.74
RTN4-211ENST00000438462 ABHD13Q7L211 337 aa10.41□□□□□ -0.74
RTN4-211ENST00000438462 AMIGO1Q86WK6 493 aa10.41□□□□□ -0.74
RTN4-211ENST00000438462 TTC29Q8NA56 475 aaPredicted RBP10.41□□□□□ -0.74
RTN4-211ENST00000438462 ZFP62Q8NB50 900 aaPredicted RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms