RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 MAST1Q9Y2H9 1570 aa2.7□□□□□ -1.98
HMGB1P31-201ENST00000437242 RGS12O14924 1447 aa2.69□□□□□ -1.98
HMGB1P31-201ENST00000437242 NPHP4O75161 1426 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P31-201ENST00000437242 MROH1Q8NDA8 1641 aa2.69□□□□□ -1.98
HMGB1P31-201ENST00000437242 IGLV9-49A0A0B4J1Y8 123 aa2.69□□□□□ -1.98
HMGB1P31-201ENST00000437242 A0A1W2PR77 199 aa2.69□□□□□ -1.98
HMGB1P31-201ENST00000437242 OR2A25A4D2G3 310 aa2.69□□□□□ -1.98
HMGB1P31-201ENST00000437242 KLLNB2CW77 178 aa2.69□□□□□ -1.98
HMGB1P31-201ENST00000437242 CTDSP2O14595 271 aa2.69□□□□□ -1.98
HMGB1P31-201ENST00000437242 PAPSS1O43252 624 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P31-201ENST00000437242 BEST1O76090 585 aa2.69□□□□□ -1.98
HMGB1P31-201ENST00000437242 GH2P01242 217 aa2.69□□□□□ -1.98
HMGB1P31-201ENST00000437242 IGKV3-15P01624 115 aa2.69□□□□□ -1.98
HMGB1P31-201ENST00000437242 CBLP22681 906 aa2.69□□□□□ -1.98
HMGB1P31-201ENST00000437242 MSH2P43246 934 aa2.69□□□□□ -1.98
HMGB1P31-201ENST00000437242 NRIP1P48552 1158 aa2.69□□□□□ -1.98
HMGB1P31-201ENST00000437242 LMAN1P49257 510 aa2.69□□□□□ -1.98
HMGB1P31-201ENST00000437242 RPS18P62269 152 aaKnown RBP2.69□□□□□ -1.98
HMGB1P31-201ENST00000437242 CXCL9Q07325 125 aa2.69□□□□□ -1.98
HMGB1P31-201ENST00000437242 KCNC3Q14003 757 aa2.69□□□□□ -1.98
HMGB1P31-201ENST00000437242 BAATQ14032 418 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P31-201ENST00000437242 MVPQ14764 893 aaKnown RBP2.69□□□□□ -1.98
HMGB1P31-201ENST00000437242 CYP4A22Q5TCH4 519 aa2.69□□□□□ -1.98
HMGB1P31-201ENST00000437242 Q6ZR54 194 aa2.69□□□□□ -1.98
HMGB1P31-201ENST00000437242 TPRG1Q6ZUI0 275 aa2.69□□□□□ -1.98
HMGB1P31-201ENST00000437242 ENOSF1Q7L5Y1 443 aa2.69□□□□□ -1.98
HMGB1P31-201ENST00000437242 GALNT5Q7Z7M9 940 aa2.69□□□□□ -1.98
HMGB1P31-201ENST00000437242 SCYL3Q8IZE3 742 aa2.69□□□□□ -1.98
HMGB1P31-201ENST00000437242 LSMEM2Q8N112 164 aa2.69□□□□□ -1.98
HMGB1P31-201ENST00000437242 SLC39A11Q8N1S5 342 aa2.69□□□□□ -1.98
HMGB1P31-201ENST00000437242 CEP295NLQ96MC4 621 aa2.69□□□□□ -1.98
HMGB1P31-201ENST00000437242 NSMCE3Q96MG7 304 aa2.69□□□□□ -1.98
HMGB1P31-201ENST00000437242 TRIM6Q9C030 488 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P31-201ENST00000437242 SEMA6AQ9H2E6 1030 aa2.69□□□□□ -1.98
HMGB1P31-201ENST00000437242 ANKEF1Q9NU02 776 aa2.69□□□□□ -1.98
HMGB1P31-201ENST00000437242 RNF186Q9NXI6 227 aa2.69□□□□□ -1.98
HMGB1P31-201ENST00000437242 B3GALT5Q9Y2C3 310 aa2.69□□□□□ -1.98
HMGB1P31-201ENST00000437242 SEC23IPQ9Y6Y8 1000 aaKnown RBP2.69□□□□□ -1.98
HMGB1P31-201ENST00000437242 PIK3C2BO00750 1634 aa2.68□□□□□ -1.98
HMGB1P31-201ENST00000437242 BRWD3Q6RI45 1802 aa2.68□□□□□ -1.98
HMGB1P31-201ENST00000437242 LNP1A1A4G5 178 aa2.68□□□□□ -1.98
HMGB1P31-201ENST00000437242 OR2M5A3KFT3 312 aa2.68□□□□□ -1.98
HMGB1P31-201ENST00000437242 TMEM8BA6NDV4 472 aa2.68□□□□□ -1.98
HMGB1P31-201ENST00000437242 TOM1O60784 492 aa2.68□□□□□ -1.98
HMGB1P31-201ENST00000437242 ENTPD3O75355 529 aa2.68□□□□□ -1.98
HMGB1P31-201ENST00000437242 ERAL1O75616 437 aaKnown RBP2.68□□□□□ -1.98
HMGB1P31-201ENST00000437242 GJB3O75712 270 aa2.68□□□□□ -1.98
HMGB1P31-201ENST00000437242 NXPH2O95156 264 aa2.68□□□□□ -1.98
HMGB1P31-201ENST00000437242 CLDN1O95832 211 aa2.68□□□□□ -1.98
HMGB1P31-201ENST00000437242 H1F0P07305 194 aaKnown RBP2.68□□□□□ -1.98
HMGB1P31-201ENST00000437242 IL11P20809 199 aa2.68□□□□□ -1.98
HMGB1P31-201ENST00000437242 HRH2P25021 359 aa2.68□□□□□ -1.98
HMGB1P31-201ENST00000437242 MAGEA11P43364 429 aa2.68□□□□□ -1.98
HMGB1P31-201ENST00000437242 PGFP49763 221 aa2.68□□□□□ -1.98
HMGB1P31-201ENST00000437242 ARSEP51690 589 aa2.68□□□□□ -1.98
HMGB1P31-201ENST00000437242 STAT2P52630 851 aa2.68□□□□□ -1.98
HMGB1P31-201ENST00000437242 ELAVL2Q12926 359 aaKnown RBP2.68□□□□□ -1.98
HMGB1P31-201ENST00000437242 GAGE2BQ13066 116 aa2.68□□□□□ -1.98
HMGB1P31-201ENST00000437242 DRP2Q13474 957 aa2.68□□□□□ -1.98
HMGB1P31-201ENST00000437242 BECN1Q14457 450 aa2.68□□□□□ -1.98
HMGB1P31-201ENST00000437242 PCLAFQ15004 111 aa2.68□□□□□ -1.98
HMGB1P31-201ENST00000437242 NECTIN1Q15223 517 aa2.68□□□□□ -1.98
HMGB1P31-201ENST00000437242 GAGE2EQ4V326 116 aa2.68□□□□□ -1.98
HMGB1P31-201ENST00000437242 MFSD4BQ5TF39 518 aa2.68□□□□□ -1.98
HMGB1P31-201ENST00000437242 GPR139Q6DWJ6 353 aa2.68□□□□□ -1.98
HMGB1P31-201ENST00000437242 FAM109BQ6ICB4 259 aaPredicted RBP2.68□□□□□ -1.98
HMGB1P31-201ENST00000437242 GAGE2AQ6NT46 116 aa2.68□□□□□ -1.98
HMGB1P31-201ENST00000437242 DENND5BQ6ZUT9 1274 aa2.68□□□□□ -1.98
HMGB1P31-201ENST00000437242 CRYBG2Q8N1P7 616 aa2.68□□□□□ -1.98
HMGB1P31-201ENST00000437242 LSMEM1Q8N8F7 131 aa2.68□□□□□ -1.98
HMGB1P31-201ENST00000437242 RASL10AQ92737 203 aa2.68□□□□□ -1.98
HMGB1P31-201ENST00000437242 SLC22A18Q96BI1 424 aa2.68□□□□□ -1.98
HMGB1P31-201ENST00000437242 GAD1Q99259 594 aa2.68□□□□□ -1.98
HMGB1P31-201ENST00000437242 SOSTQ9BQB4 213 aa2.68□□□□□ -1.98
HMGB1P31-201ENST00000437242 SRSF8Q9BRL6 282 aaKnown RBP2.68□□□□□ -1.98
HMGB1P31-201ENST00000437242 MXD3Q9BW11 206 aa2.68□□□□□ -1.98
HMGB1P31-201ENST00000437242 RTN4RQ9BZR6 473 aa2.68□□□□□ -1.98
HMGB1P31-201ENST00000437242 DENND2DQ9H6A0 471 aaPredicted RBP2.68□□□□□ -1.98
HMGB1P31-201ENST00000437242 PDE7BQ9NP56 450 aa2.68□□□□□ -1.98
HMGB1P31-201ENST00000437242 SLC35C2Q9NQQ7 365 aa2.68□□□□□ -1.98
HMGB1P31-201ENST00000437242 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.68□□□□□ -1.98
HMGB1P31-201ENST00000437242 INTS9Q9NV88 658 aaKnown RBP2.68□□□□□ -1.98
HMGB1P31-201ENST00000437242 MIOSQ9NXC5 875 aa2.68□□□□□ -1.98
HMGB1P31-201ENST00000437242 ERAP1Q9NZ08 941 aa2.68□□□□□ -1.98
HMGB1P31-201ENST00000437242 GAGE2DQ9UEU5 116 aa2.68□□□□□ -1.98
HMGB1P31-201ENST00000437242 EPHA6Q9UF33 1036 aa2.68□□□□□ -1.98
HMGB1P31-201ENST00000437242 AMACRQ9UHK6 382 aa2.68□□□□□ -1.98
HMGB1P31-201ENST00000437242 PRO0461Q9UI25 63 aa2.68□□□□□ -1.98
HMGB1P31-201ENST00000437242 DBNLQ9UJU6 430 aaKnown RBP2.68□□□□□ -1.98
HMGB1P31-201ENST00000437242 RPS6KA6Q9UK32 745 aa2.68□□□□□ -1.98
HMGB1P31-201ENST00000437242 MED14O60244 1454 aa2.68□□□□□ -1.98
HMGB1P31-201ENST00000437242 A2MP01023 1474 aa2.68□□□□□ -1.98
HMGB1P31-201ENST00000437242 NCOA2Q15596 1464 aa2.68□□□□□ -1.98
HMGB1P31-201ENST00000437242 ARHGAP35Q9NRY4 1499 aa2.68□□□□□ -1.98
HMGB1P31-201ENST00000437242 TIAM1Q13009 1591 aa2.68□□□□□ -1.98
HMGB1P31-201ENST00000437242 UGGT1Q9NYU2 1555 aa2.68□□□□□ -1.98
HMGB1P31-201ENST00000437242 SHPRHQ149N8 1683 aa2.68□□□□□ -1.98
HMGB1P31-201ENST00000437242 TROQ12816 1431 aaPredicted RBP2.68□□□□□ -1.98
HMGB1P31-201ENST00000437242 CNTLNQ9NXG0 1405 aa2.68□□□□□ -1.98
HMGB1P31-201ENST00000437242 KDM5AP29375 1690 aaKnown RBP2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms