RNA–Protein interactions for RNA: ENST00000434436.7

MBD3-202, Transcript of methyl-CpG binding domain protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MBD3, Length 2,439 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-202ENST00000434436 CHID1Q9BWS9 393 aa23.11■■□□□ 1.29
MBD3-202ENST00000434436 MRPS26Q9BYN8 205 aaKnown RBP23.11■■□□□ 1.29
MBD3-202ENST00000434436 COQ6Q9Y2Z9 468 aa23.11■■□□□ 1.29
MBD3-202ENST00000434436 SERTM1A2A2V5 107 aa23.1■■□□□ 1.29
MBD3-202ENST00000434436 OTOL1A6NHN0 477 aaPredicted RBP23.1■■□□□ 1.29
MBD3-202ENST00000434436 ATG13O75143 517 aa23.1■■□□□ 1.29
MBD3-202ENST00000434436 CLPTM1O96005 669 aa23.1■■□□□ 1.29
MBD3-202ENST00000434436 ANXA6P08133 673 aa23.1■■□□□ 1.29
MBD3-202ENST00000434436 CDH1P12830 882 aa23.1■■□□□ 1.29
MBD3-202ENST00000434436 HLA-EP13747 358 aa23.1■■□□□ 1.29
MBD3-202ENST00000434436 APOFQ13790 326 aa23.1■■□□□ 1.29
MBD3-202ENST00000434436 GAB4Q2WGN9 574 aa23.1■■□□□ 1.29
MBD3-202ENST00000434436 CNPY1Q3B7I2 92 aa23.1■■□□□ 1.29
MBD3-202ENST00000434436 SYTL3Q4VX76 610 aa23.1■■□□□ 1.29
MBD3-202ENST00000434436 GLMNQ92990 594 aa23.1■■□□□ 1.29
MBD3-202ENST00000434436 TMEM159Q96B96 161 aa23.1■■□□□ 1.29
MBD3-202ENST00000434436 COQ10AQ96MF6 247 aa23.1■■□□□ 1.29
MBD3-202ENST00000434436 RNF145Q96MT1 663 aa23.1■■□□□ 1.29
MBD3-202ENST00000434436 CCDC115Q96NT0 180 aa23.1■■□□□ 1.29
MBD3-202ENST00000434436 CCM2Q9BSQ5 444 aa23.1■■□□□ 1.29
MBD3-202ENST00000434436 PAIP1Q9H074 479 aaKnown RBP23.1■■□□□ 1.29
MBD3-202ENST00000434436 SERHLQ9NQF3 203 aa23.1■■□□□ 1.29
MBD3-202ENST00000434436 CIDEBQ9UHD4 219 aa23.1■■□□□ 1.29
MBD3-202ENST00000434436 PPT2Q9UMR5 302 aa23.1■■□□□ 1.29
MBD3-202ENST00000434436 CHD9Q3L8U1 2897 aa23.1■■□□□ 1.29
MBD3-202ENST00000434436 KCNC3Q14003 757 aa23.1■■□□□ 1.29
MBD3-202ENST00000434436 TMTC4Q5T4D3 741 aa23.1■■□□□ 1.29
MBD3-202ENST00000434436 TMEM220Q6QAJ8 160 aa23.1■■□□□ 1.29
MBD3-202ENST00000434436 UBE2Q1Q7Z7E8 422 aa23.1■■□□□ 1.29
MBD3-202ENST00000434436 THOC6Q86W42 341 aaKnown RBP23.1■■□□□ 1.29
MBD3-202ENST00000434436 NRSN1Q8IZ57 195 aa23.1■■□□□ 1.29
MBD3-202ENST00000434436 ZNF548Q8NEK5 533 aaPredicted RBP23.1■■□□□ 1.29
MBD3-202ENST00000434436 OR2T12Q8NG77 320 aa23.1■■□□□ 1.29
MBD3-202ENST00000434436 RASAL1O95294 804 aa23.09■■□□□ 1.29
MBD3-202ENST00000434436 AMD1P17707 334 aa23.09■■□□□ 1.29
MBD3-202ENST00000434436 NELFEP18615 380 aaKnown RBP23.09■■□□□ 1.29
MBD3-202ENST00000434436 MAP4P27816 1152 aaKnown RBP23.09■■□□□ 1.29
MBD3-202ENST00000434436 RPL5P46777 297 aaKnown RBP23.09■■□□□ 1.29
MBD3-202ENST00000434436 SLC22A15Q8IZD6 547 aa23.09■■□□□ 1.29
MBD3-202ENST00000434436 METTL25Q8N6Q8 603 aa23.09■■□□□ 1.29
MBD3-202ENST00000434436 ST13P5Q8NFI4 369 aaPredicted RBP23.09■■□□□ 1.29
MBD3-202ENST00000434436 ARRDC3Q96B67 414 aa23.09■■□□□ 1.29
MBD3-202ENST00000434436 DTD2Q96FN9 168 aa23.09■■□□□ 1.29
MBD3-202ENST00000434436 STOX2Q9P2F5 926 aaPredicted RBP23.09■■□□□ 1.29
MBD3-202ENST00000434436 RNF103-CHMP3A0A140T963 221 aa23.09■■□□□ 1.29
MBD3-202ENST00000434436 OR6B1O95007 311 aa23.09■■□□□ 1.29
MBD3-202ENST00000434436 B3GALT4O96024 378 aa23.09■■□□□ 1.29
MBD3-202ENST00000434436 SOD1P00441 154 aa23.09■■□□□ 1.29
MBD3-202ENST00000434436 ATP6V1B1P15313 513 aa23.09■■□□□ 1.29
MBD3-202ENST00000434436 BDKRB1P46663 353 aa23.09■■□□□ 1.29
MBD3-202ENST00000434436 POLE2P56282 527 aa23.09■■□□□ 1.29
MBD3-202ENST00000434436 IRF8Q02556 426 aa23.09■■□□□ 1.29
MBD3-202ENST00000434436 TMC5Q6UXY8 1006 aa23.09■■□□□ 1.29
MBD3-202ENST00000434436 EGLN2Q96KS0 407 aa23.09■■□□□ 1.29
MBD3-202ENST00000434436 APOLD1Q96LR9 279 aa23.09■■□□□ 1.29
MBD3-202ENST00000434436 OLAHQ9NV23 265 aa23.09■■□□□ 1.29
MBD3-202ENST00000434436 PCDHB14Q9Y5E9 798 aa23.09■■□□□ 1.29
MBD3-202ENST00000434436 C2orf16Q68DN1 1984 aa23.08■■□□□ 1.29
MBD3-202ENST00000434436 MUC22E2RYF6 1773 aaPredicted RBP23.08■■□□□ 1.29
MBD3-202ENST00000434436 PSMD11O00231 422 aa23.08■■□□□ 1.29
MBD3-202ENST00000434436 LDLRP01130 860 aa23.08■■□□□ 1.29
MBD3-202ENST00000434436 RB1P06400 928 aa23.08■■□□□ 1.29
MBD3-202ENST00000434436 PDHA2P29803 388 aa23.08■■□□□ 1.29
MBD3-202ENST00000434436 C9orf64Q5T6V5 341 aa23.08■■□□□ 1.29
MBD3-202ENST00000434436 LIPJQ5W064 366 aa23.08■■□□□ 1.29
MBD3-202ENST00000434436 AGTRAPQ6RW13 159 aa23.08■■□□□ 1.29
MBD3-202ENST00000434436 CARS2Q9HA77 564 aaKnown RBP23.08■■□□□ 1.29
MBD3-202ENST00000434436 GULP1Q9UBP9 304 aa23.08■■□□□ 1.29
MBD3-202ENST00000434436 MAN2B2Q9Y2E5 1009 aa23.08■■□□□ 1.29
MBD3-202ENST00000434436 TMED5Q9Y3A6 229 aa23.08■■□□□ 1.29
MBD3-202ENST00000434436 ENO4A6NNW6 628 aa23.08■■□□□ 1.28
MBD3-202ENST00000434436 NPC1O15118 1278 aa23.08■■□□□ 1.28
MBD3-202ENST00000434436 PRNPP04156 253 aa23.08■■□□□ 1.28
MBD3-202ENST00000434436 PBLDP30039 288 aaPredicted RBP23.08■■□□□ 1.28
MBD3-202ENST00000434436 S100A3P33764 101 aa23.08■■□□□ 1.28
MBD3-202ENST00000434436 NAE1Q13564 534 aa23.08■■□□□ 1.28
MBD3-202ENST00000434436 FAM78AQ5JUQ0 283 aa23.08■■□□□ 1.28
MBD3-202ENST00000434436 NLRP8Q86W28 1048 aa23.08■■□□□ 1.28
MBD3-202ENST00000434436 SFTPA1Q8IWL2 248 aa23.08■■□□□ 1.28
MBD3-202ENST00000434436 PHACTR4Q8IZ21 702 aa23.08■■□□□ 1.28
MBD3-202ENST00000434436 AADATQ8N5Z0 425 aa23.08■■□□□ 1.28
MBD3-202ENST00000434436 FIG4Q92562 907 aa23.08■■□□□ 1.28
MBD3-202ENST00000434436 INPP5KQ9BT40 448 aa23.08■■□□□ 1.28
MBD3-202ENST00000434436 KCNH6Q9H252 994 aa23.08■■□□□ 1.28
MBD3-202ENST00000434436 EPB41L1Q9H4G0 881 aa23.08■■□□□ 1.28
MBD3-202ENST00000434436 GORASP2Q9H8Y8 452 aa23.08■■□□□ 1.28
MBD3-202ENST00000434436 E7EQ34 232 aa23.07■■□□□ 1.28
MBD3-202ENST00000434436 EI24O14681 340 aa23.07■■□□□ 1.28
MBD3-202ENST00000434436 CLGNO14967 610 aa23.07■■□□□ 1.28
MBD3-202ENST00000434436 HOXB9P17482 250 aaPredicted RBP23.07■■□□□ 1.28
MBD3-202ENST00000434436 ZNF658BQ4V348 819 aaPredicted RBP23.07■■□□□ 1.28
MBD3-202ENST00000434436 XKR6Q5GH73 641 aa23.07■■□□□ 1.28
MBD3-202ENST00000434436 LRIF1Q5T3J3 769 aa23.07■■□□□ 1.28
MBD3-202ENST00000434436 WDR20Q8TBZ3 569 aa23.07■■□□□ 1.28
MBD3-202ENST00000434436 FCRL1Q96LA6 429 aa23.07■■□□□ 1.28
MBD3-202ENST00000434436 MAGEB10Q96LZ2 347 aaPredicted RBP23.07■■□□□ 1.28
MBD3-202ENST00000434436 CCDC138Q96M89 665 aa23.07■■□□□ 1.28
MBD3-202ENST00000434436 HHIPQ96QV1 700 aa23.07■■□□□ 1.28
MBD3-202ENST00000434436 OR4K3Q96R72 315 aa23.07■■□□□ 1.28
MBD3-202ENST00000434436 HPS4Q9NQG7 708 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms