RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 OLA1Q9NTK5 396 aaKnown RBP2.9□□□□□ -1.95
PTPN4-205ENST00000433888 CLIC5Q9NZA1 410 aa2.9□□□□□ -1.95
PTPN4-205ENST00000433888 CTSZQ9UBR2 303 aa2.9□□□□□ -1.95
PTPN4-205ENST00000433888 PRO0461Q9UI25 63 aa2.9□□□□□ -1.95
PTPN4-205ENST00000433888 ZHX1Q9UKY1 873 aaPredicted RBP2.9□□□□□ -1.95
PTPN4-205ENST00000433888 CORO1CQ9ULV4 474 aaPredicted RBP2.9□□□□□ -1.95
PTPN4-205ENST00000433888 ZNF541Q9H0D2 1346 aa2.9□□□□□ -1.95
PTPN4-205ENST00000433888 LOC105371242A0A075B767 164 aa2.89□□□□□ -1.95
PTPN4-205ENST00000433888 GJB3O75712 270 aa2.89□□□□□ -1.95
PTPN4-205ENST00000433888 BAIAP3O94812 1187 aa2.89□□□□□ -1.95
PTPN4-205ENST00000433888 DDHD2O94830 711 aa2.89□□□□□ -1.95
PTPN4-205ENST00000433888 LHCGRP22888 699 aa2.89□□□□□ -1.95
PTPN4-205ENST00000433888 PIK3R1P27986 724 aa2.89□□□□□ -1.95
PTPN4-205ENST00000433888 ACTN2P35609 894 aa2.89□□□□□ -1.95
PTPN4-205ENST00000433888 KRT20P35900 424 aa2.89□□□□□ -1.95
PTPN4-205ENST00000433888 ZFP36L2P47974 494 aaKnown RBP2.89□□□□□ -1.95
PTPN4-205ENST00000433888 DCAF7P61962 342 aa2.89□□□□□ -1.95
PTPN4-205ENST00000433888 GCNT1Q02742 428 aa2.89□□□□□ -1.95
PTPN4-205ENST00000433888 GUCY2DQ02846 1103 aa2.89□□□□□ -1.95
PTPN4-205ENST00000433888 ARMC3Q5W041 872 aa2.89□□□□□ -1.95
PTPN4-205ENST00000433888 FAM205BPQ63HN1 556 aa2.89□□□□□ -1.95
PTPN4-205ENST00000433888 FRRS1Q6ZNA5 592 aa2.89□□□□□ -1.95
PTPN4-205ENST00000433888 RTN4RL2Q86UN3 420 aa2.89□□□□□ -1.95
PTPN4-205ENST00000433888 ARHGAP24Q8N264 748 aa2.89□□□□□ -1.95
PTPN4-205ENST00000433888 TDRD7Q8NHU6 1098 aaKnown RBP2.89□□□□□ -1.95
PTPN4-205ENST00000433888 ERP27Q96DN0 273 aa2.89□□□□□ -1.95
PTPN4-205ENST00000433888 LMF2Q9BU23 707 aaKnown RBP2.89□□□□□ -1.95
PTPN4-205ENST00000433888 LARSQ9P2J5 1176 aaKnown RBP2.89□□□□□ -1.95
PTPN4-205ENST00000433888 B3GAT1Q9P2W7 334 aa2.89□□□□□ -1.95
PTPN4-205ENST00000433888 CLIP2Q9UDT6 1046 aa2.89□□□□□ -1.95
PTPN4-205ENST00000433888 DAPK2Q9UIK4 370 aa2.89□□□□□ -1.95
PTPN4-205ENST00000433888 CELA1Q9UNI1 258 aa2.89□□□□□ -1.95
PTPN4-205ENST00000433888 ZNF510Q9Y2H8 683 aa2.89□□□□□ -1.95
PTPN4-205ENST00000433888 CSNK1G3Q9Y6M4 447 aa2.89□□□□□ -1.95
PTPN4-205ENST00000433888 SYNDIG1LA6NDD5 238 aa2.88□□□□□ -1.95
PTPN4-205ENST00000433888 PGPEP1LA6NFU8 196 aa2.88□□□□□ -1.95
PTPN4-205ENST00000433888 TSPY2A6NKD2 308 aa2.88□□□□□ -1.95
PTPN4-205ENST00000433888 XRCC3O43542 346 aa2.88□□□□□ -1.95
PTPN4-205ENST00000433888 DOK2O60496 412 aa2.88□□□□□ -1.95
PTPN4-205ENST00000433888 IGHEP01854 428 aa2.88□□□□□ -1.95
PTPN4-205ENST00000433888 TSPY3P0CV98 308 aa2.88□□□□□ -1.95
PTPN4-205ENST00000433888 TSPY8P0CW00 308 aa2.88□□□□□ -1.95
PTPN4-205ENST00000433888 LAMP2P13473 410 aa2.88□□□□□ -1.95
PTPN4-205ENST00000433888 GP9P14770 177 aa2.88□□□□□ -1.95
PTPN4-205ENST00000433888 MMP9P14780 707 aa2.88□□□□□ -1.95
PTPN4-205ENST00000433888 HLA-FP30511 346 aa2.88□□□□□ -1.95
PTPN4-205ENST00000433888 EIF5P55010 431 aaKnown RBP2.88□□□□□ -1.95
PTPN4-205ENST00000433888 TSPY1Q01534 308 aa2.88□□□□□ -1.95
PTPN4-205ENST00000433888 NUCB1Q02818 461 aa2.88□□□□□ -1.95
PTPN4-205ENST00000433888 TAF10Q12962 218 aa2.88□□□□□ -1.95
PTPN4-205ENST00000433888 MZT2BQ6NZ67 158 aa2.88□□□□□ -1.95
PTPN4-205ENST00000433888 FIGLAQ6QHK4 219 aa2.88□□□□□ -1.95
PTPN4-205ENST00000433888 C4orf50Q6ZRC1 276 aa2.88□□□□□ -1.95
PTPN4-205ENST00000433888 ENOSF1Q7L5Y1 443 aa2.88□□□□□ -1.95
PTPN4-205ENST00000433888 SLC34A3Q8N130 599 aa2.88□□□□□ -1.95
PTPN4-205ENST00000433888 GPRC5AQ8NFJ5 357 aa2.88□□□□□ -1.95
PTPN4-205ENST00000433888 OR11H4Q8NGC9 324 aa2.88□□□□□ -1.95
PTPN4-205ENST00000433888 APOBEC4Q8WW27 367 aaKnown RBP2.88□□□□□ -1.95
PTPN4-205ENST00000433888 CEP295NLQ96MC4 621 aa2.88□□□□□ -1.95
PTPN4-205ENST00000433888 RAD9AQ99638 391 aa2.88□□□□□ -1.95
PTPN4-205ENST00000433888 UNC45AQ9H3U1 944 aa2.88□□□□□ -1.95
PTPN4-205ENST00000433888 SH2D4AQ9H788 454 aa2.88□□□□□ -1.95
PTPN4-205ENST00000433888 CHMP1AQ9HD42 196 aaPredicted RBP2.88□□□□□ -1.95
PTPN4-205ENST00000433888 TBC1D29Q9UFV1 150 aa2.88□□□□□ -1.95
PTPN4-205ENST00000433888 CDRT15L2A8MXV6 281 aa2.87□□□□□ -1.95
PTPN4-205ENST00000433888 MYO1GB0I1T2 1018 aa2.87□□□□□ -1.95
PTPN4-205ENST00000433888 USO1O60763 962 aaKnown RBP2.87□□□□□ -1.95
PTPN4-205ENST00000433888 MELTFP08582 738 aa2.87□□□□□ -1.95
PTPN4-205ENST00000433888 THEGLP0DJG4 465 aa2.87□□□□□ -1.95
PTPN4-205ENST00000433888 HSPA8P11142 646 aaKnown RBP2.87□□□□□ -1.95
PTPN4-205ENST00000433888 SLC2A2P11168 524 aaPredicted RBP2.87□□□□□ -1.95
PTPN4-205ENST00000433888 ETV5P41161 510 aa2.87□□□□□ -1.95
PTPN4-205ENST00000433888 MTHFRP42898 656 aa2.87□□□□□ -1.95
PTPN4-205ENST00000433888 TPD52P55327 224 aaPredicted RBP2.87□□□□□ -1.95
PTPN4-205ENST00000433888 CDK3Q00526 305 aa2.87□□□□□ -1.95
PTPN4-205ENST00000433888 CD300CQ08708 224 aa2.87□□□□□ -1.95
PTPN4-205ENST00000433888 EFTUD2Q15029 972 aaKnown RBP eCLIP2.87□□□□□ -1.95
PTPN4-205ENST00000433888 GDPGP1Q6ZNW5 385 aa2.87□□□□□ -1.95
PTPN4-205ENST00000433888 TEX11Q8IYF3 940 aa2.87□□□□□ -1.95
PTPN4-205ENST00000433888 OR8H2Q8N162 312 aa2.87□□□□□ -1.95
PTPN4-205ENST00000433888 Q8N7P7 452 aa2.87□□□□□ -1.95
PTPN4-205ENST00000433888 CHPT1Q8WUD6 406 aa2.87□□□□□ -1.95
PTPN4-205ENST00000433888 KIFC3Q9BVG8 833 aa2.87□□□□□ -1.95
PTPN4-205ENST00000433888 DIAPH3Q9NSV4 1193 aa2.87□□□□□ -1.95
PTPN4-205ENST00000433888 TBC1D22BQ9NU19 505 aa2.87□□□□□ -1.95
PTPN4-205ENST00000433888 SPHK1Q9NYA1 384 aa2.87□□□□□ -1.95
PTPN4-205ENST00000433888 BCCIPQ9P287 314 aaKnown RBP eCLIP2.87□□□□□ -1.95
PTPN4-205ENST00000433888 ZNF107Q9UII5 783 aaPredicted RBP2.87□□□□□ -1.95
PTPN4-205ENST00000433888 GPR34Q9UPC5 381 aa2.87□□□□□ -1.95
PTPN4-205ENST00000433888 PCDH11YQ9BZA8 1340 aa2.87□□□□□ -1.95
PTPN4-205ENST00000433888 ENO4A6NNW6 628 aa2.86□□□□□ -1.95
PTPN4-205ENST00000433888 CCER2I3L3R5 266 aa2.86□□□□□ -1.95
PTPN4-205ENST00000433888 MITFO75030 526 aaPredicted RBP2.86□□□□□ -1.95
PTPN4-205ENST00000433888 MED24O75448 989 aa2.86□□□□□ -1.95
PTPN4-205ENST00000433888 CDH8P55286 799 aa2.86□□□□□ -1.95
PTPN4-205ENST00000433888 CXCL9Q07325 125 aa2.86□□□□□ -1.95
PTPN4-205ENST00000433888 NR1D2Q14995 579 aa2.86□□□□□ -1.95
PTPN4-205ENST00000433888 MEA1Q16626 185 aa2.86□□□□□ -1.95
PTPN4-205ENST00000433888 KCNMB4Q86W47 210 aa2.86□□□□□ -1.95
PTPN4-205ENST00000433888 WDTC1Q8N5D0 677 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms