RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 PKP4Q99569 1192 aa2.93□□□□□ -1.94
HMGB1P27-201ENST00000431429 MRPL9Q9BYD2 267 aaKnown RBP2.93□□□□□ -1.94
HMGB1P27-201ENST00000431429 KRTAP4-2Q9BYR5 136 aa2.93□□□□□ -1.94
HMGB1P27-201ENST00000431429 TM6SF1Q9BZW5 370 aa2.93□□□□□ -1.94
HMGB1P27-201ENST00000431429 APOBEC3GQ9HC16 384 aaKnown RBP2.93□□□□□ -1.94
HMGB1P27-201ENST00000431429 IL1RAPL2Q9NP60 686 aa2.93□□□□□ -1.94
HMGB1P27-201ENST00000431429 GKN1Q9NS71 199 aa2.93□□□□□ -1.94
HMGB1P27-201ENST00000431429 PNPLA3Q9NST1 481 aa2.93□□□□□ -1.94
HMGB1P27-201ENST00000431429 CNIH4Q9P003 139 aa2.93□□□□□ -1.94
HMGB1P27-201ENST00000431429 KIF13AQ9H1H9 1805 aa2.93□□□□□ -1.94
HMGB1P27-201ENST00000431429 WRNQ14191 1432 aaPredicted RBP eCLIP2.93□□□□□ -1.94
HMGB1P27-201ENST00000431429 SPATA31D1Q6ZQQ2 1576 aa2.92□□□□□ -1.94
HMGB1P27-201ENST00000431429 TNIKQ9UKE5 1360 aa2.92□□□□□ -1.94
HMGB1P27-201ENST00000431429 ARID2Q68CP9 1835 aa2.92□□□□□ -1.94
HMGB1P27-201ENST00000431429 A0A1W2PN81 502 aa2.92□□□□□ -1.94
HMGB1P27-201ENST00000431429 A0A1W2PRB8 838 aa2.92□□□□□ -1.94
HMGB1P27-201ENST00000431429 YDJCA8MPS7 323 aa2.92□□□□□ -1.94
HMGB1P27-201ENST00000431429 PRAC2D3DTV9 90 aa2.92□□□□□ -1.94
HMGB1P27-201ENST00000431429 O00370 1275 aa2.92□□□□□ -1.94
HMGB1P27-201ENST00000431429 PLOD2O00469 737 aa2.92□□□□□ -1.94
HMGB1P27-201ENST00000431429 XPNPEP2O43895 674 aa2.92□□□□□ -1.94
HMGB1P27-201ENST00000431429 PRKNO60260 465 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P27-201ENST00000431429 SLC22A3O75751 556 aa2.92□□□□□ -1.94
HMGB1P27-201ENST00000431429 SPP1P10451 314 aa2.92□□□□□ -1.94
HMGB1P27-201ENST00000431429 SP100P23497 879 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P27-201ENST00000431429 CD27P26842 260 aa2.92□□□□□ -1.94
HMGB1P27-201ENST00000431429 PSMB4P28070 264 aa2.92□□□□□ -1.94
HMGB1P27-201ENST00000431429 EPHA2P29317 976 aa2.92□□□□□ -1.94
HMGB1P27-201ENST00000431429 CHRNA7P36544 502 aa2.92□□□□□ -1.94
HMGB1P27-201ENST00000431429 FRKP42685 505 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P27-201ENST00000431429 KHKP50053 298 aa2.92□□□□□ -1.94
HMGB1P27-201ENST00000431429 ART1P52961 327 aa2.92□□□□□ -1.94
HMGB1P27-201ENST00000431429 GSDMDP57764 484 aa2.92□□□□□ -1.94
HMGB1P27-201ENST00000431429 ZXDBP98169 803 aa2.92□□□□□ -1.94
HMGB1P27-201ENST00000431429 ITPRIPL2Q3MIP1 535 aa2.92□□□□□ -1.94
HMGB1P27-201ENST00000431429 MCMDC2Q4G0Z9 681 aa2.92□□□□□ -1.94
HMGB1P27-201ENST00000431429 ZNF789Q5FWF6 425 aa2.92□□□□□ -1.94
HMGB1P27-201ENST00000431429 SPOUT1Q5T280 376 aaKnown RBP2.92□□□□□ -1.94
HMGB1P27-201ENST00000431429 CYP4A22Q5TCH4 519 aa2.92□□□□□ -1.94
HMGB1P27-201ENST00000431429 C11orf63Q6NUN7 778 aa2.92□□□□□ -1.94
HMGB1P27-201ENST00000431429 PRSS57Q6UWY2 283 aa2.92□□□□□ -1.94
HMGB1P27-201ENST00000431429 FOXL2NBQ6ZUU3 175 aa2.92□□□□□ -1.94
HMGB1P27-201ENST00000431429 SPATA21Q7Z572 469 aa2.92□□□□□ -1.94
HMGB1P27-201ENST00000431429 ARHGAP22Q7Z5H3 698 aa2.92□□□□□ -1.94
HMGB1P27-201ENST00000431429 ARHGAP30Q7Z6I6 1101 aaPredicted RBP2.92□□□□□ -1.94
HMGB1P27-201ENST00000431429 NRARPQ7Z6K4 114 aa2.92□□□□□ -1.94
HMGB1P27-201ENST00000431429 PLD3Q8IV08 490 aa2.92□□□□□ -1.94
HMGB1P27-201ENST00000431429 UXS1Q8NBZ7 420 aa2.92□□□□□ -1.94
HMGB1P27-201ENST00000431429 KCNH5Q8NCM2 988 aa2.92□□□□□ -1.94
HMGB1P27-201ENST00000431429 OR7G3Q8NG95 312 aa2.92□□□□□ -1.94
HMGB1P27-201ENST00000431429 RIT1Q92963 219 aa2.92□□□□□ -1.94
HMGB1P27-201ENST00000431429 CENPTQ96BT3 561 aa2.92□□□□□ -1.94
HMGB1P27-201ENST00000431429 PDLIM5Q96HC4 596 aaKnown RBP2.92□□□□□ -1.94
HMGB1P27-201ENST00000431429 FAM20AQ96MK3 541 aa2.92□□□□□ -1.94
HMGB1P27-201ENST00000431429 SLC2A11Q9BYW1 496 aa2.92□□□□□ -1.94
HMGB1P27-201ENST00000431429 TMEM206Q9H813 350 aa2.92□□□□□ -1.94
HMGB1P27-201ENST00000431429 EVA1AQ9H8M9 152 aa2.92□□□□□ -1.94
HMGB1P27-201ENST00000431429 SPHK1Q9NYA1 384 aa2.92□□□□□ -1.94
HMGB1P27-201ENST00000431429 SLCO1C1Q9NYB5 712 aa2.92□□□□□ -1.94
HMGB1P27-201ENST00000431429 MTRRQ9UBK8 725 aa2.92□□□□□ -1.94
HMGB1P27-201ENST00000431429 ACAD8Q9UKU7 415 aa2.92□□□□□ -1.94
HMGB1P27-201ENST00000431429 POGZQ7Z3K3 1410 aa2.92□□□□□ -1.94
HMGB1P27-201ENST00000431429 PCF11O94913 1555 aaKnown RBP2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 GLI2P10070 1586 aa2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 IGLV5-45A0A087WSX0 123 aa2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 SAA2-SAA4A0A096LPE2 208 aa2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 TNFSF12-TNFSF13A0A0A6YY99 330 aa2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 SDR42E2A6NKP2 422 aa2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 C2CD4DB7Z1M9 353 aa2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 INSIG1O15503 277 aa2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 ST8SIA3O43173 380 aa2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 SLC28A2O43868 658 aa2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 PRAF2O60831 178 aa2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 KINO60870 393 aaKnown RBP2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 PGLSO95336 258 aa2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 MOCS3O95396 460 aa2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 SLC16A8O95907 504 aa2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 GSRP00390 522 aa2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 KRT19P08727 400 aa2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 FGF5P12034 268 aa2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 CD59P13987 128 aa2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 LBPP18428 481 aa2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 HSD17B3P37058 310 aa2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 DCTP40126 519 aa2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 CASP3P42574 277 aa2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 CDKN2AP42771 156 aaKnown RBP2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 KCNJ1P48048 391 aa2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 ZNF132P52740 706 aa2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 MTCP1P56278 107 aa2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 VEZF1Q14119 521 aa2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 LASP1Q14847 261 aaKnown RBP2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 CTU2Q2VPK5 515 aaKnown RBP2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 PHLDA2Q53GA4 152 aa2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 SIRPB2Q5JXA9 342 aa2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 NADSYN1Q6IA69 706 aa2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 BTNL8Q6UX41 500 aa2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 ZNF852Q6ZMS4 543 aa2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 ANO5Q75V66 913 aa2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 ZNF771Q7L3S4 317 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P27-201ENST00000431429 HOOK3Q86VS8 718 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms