RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 MVB12BQ9H7P6 319 aa12.61□□□□□ -0.39
PTCH1-207ENST00000429896 ANKHQ9HCJ1 492 aa12.61□□□□□ -0.39
PTCH1-207ENST00000429896 TMEM216Q9P0N5 145 aa12.61□□□□□ -0.39
PTCH1-207ENST00000429896 CROTQ9UKG9 612 aa12.61□□□□□ -0.39
PTCH1-207ENST00000429896 VPS4AQ9UN37 437 aa12.61□□□□□ -0.39
PTCH1-207ENST00000429896 DMTF1Q9Y222 760 aa12.61□□□□□ -0.39
PTCH1-207ENST00000429896 HCN4Q9Y3Q4 1203 aa12.61□□□□□ -0.39
PTCH1-207ENST00000429896 C2orf74A8MZ97 194 aa12.6□□□□□ -0.39
PTCH1-207ENST00000429896 KHNYNO15037 678 aaKnown RBP12.6□□□□□ -0.39
PTCH1-207ENST00000429896 DUX1O43812 170 aa12.6□□□□□ -0.39
PTCH1-207ENST00000429896 CER1O95813 267 aa12.6□□□□□ -0.39
PTCH1-207ENST00000429896 BMP8BP34820 402 aa12.6□□□□□ -0.39
PTCH1-207ENST00000429896 SRP54P61011 504 aaKnown RBP12.6□□□□□ -0.39
PTCH1-207ENST00000429896 GPAT3Q53EU6 434 aa12.6□□□□□ -0.39
PTCH1-207ENST00000429896 DDHD1Q8NEL9 900 aa12.6□□□□□ -0.39
PTCH1-207ENST00000429896 HCAR2Q8TDS4 363 aa12.6□□□□□ -0.39
PTCH1-207ENST00000429896 DGCR6LQ9BY27 220 aa12.6□□□□□ -0.39
PTCH1-207ENST00000429896 TMEM30AQ9NV96 361 aa12.6□□□□□ -0.39
PTCH1-207ENST00000429896 IGLV3-10A0A075B6K4 115 aa12.6□□□□□ -0.39
PTCH1-207ENST00000429896 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.6□□□□□ -0.39
PTCH1-207ENST00000429896 PLIN3O60664 434 aa12.6□□□□□ -0.39
PTCH1-207ENST00000429896 LRATO95237 230 aa12.6□□□□□ -0.39
PTCH1-207ENST00000429896 PTSQ03393 145 aa12.6□□□□□ -0.39
PTCH1-207ENST00000429896 KDELC1Q6UW63 502 aa12.6□□□□□ -0.39
PTCH1-207ENST00000429896 TMC8Q8IU68 726 aa12.6□□□□□ -0.39
PTCH1-207ENST00000429896 TMEFF1Q8IYR6 380 aa12.6□□□□□ -0.39
PTCH1-207ENST00000429896 KYQ8NBH2 561 aa12.6□□□□□ -0.39
PTCH1-207ENST00000429896 CXorf56Q9H5V9 222 aa12.6□□□□□ -0.39
PTCH1-207ENST00000429896 C9J4A7 227 aa12.6□□□□□ -0.39
PTCH1-207ENST00000429896 SNX3O60493 162 aa12.6□□□□□ -0.39
PTCH1-207ENST00000429896 JMJD7P0C870 316 aa12.6□□□□□ -0.39
PTCH1-207ENST00000429896 MYCLP1P12525 358 aaPredicted RBP12.6□□□□□ -0.39
PTCH1-207ENST00000429896 ARCN1P48444 511 aaKnown RBP12.6□□□□□ -0.39
PTCH1-207ENST00000429896 PSAPL1Q6NUJ1 521 aa12.6□□□□□ -0.39
PTCH1-207ENST00000429896 CBARPQ8N350 705 aaPredicted RBP12.6□□□□□ -0.39
PTCH1-207ENST00000429896 FAM174AQ8TBP5 190 aa12.6□□□□□ -0.39
PTCH1-207ENST00000429896 DENND1AQ8TEH3 1009 aa12.6□□□□□ -0.39
PTCH1-207ENST00000429896 DCAKDQ8WVC6 231 aa12.6□□□□□ -0.39
PTCH1-207ENST00000429896 NARS2Q96I59 477 aaKnown RBP12.6□□□□□ -0.39
PTCH1-207ENST00000429896 FCRL3Q96P31 734 aaPredicted RBP12.6□□□□□ -0.39
PTCH1-207ENST00000429896 GPR22Q99680 433 aa12.6□□□□□ -0.39
PTCH1-207ENST00000429896 MARK1Q9P0L2 795 aa12.6□□□□□ -0.39
PTCH1-207ENST00000429896 TCRBV5S1A1TA0A578 114 aa12.6□□□□□ -0.39
PTCH1-207ENST00000429896 DCXO43602 365 aa12.6□□□□□ -0.39
PTCH1-207ENST00000429896 MPC1LP0DKB6 136 aa12.6□□□□□ -0.39
PTCH1-207ENST00000429896 PIM1P11309 404 aaPredicted RBP12.6□□□□□ -0.39
PTCH1-207ENST00000429896 IDO1P14902 403 aa12.6□□□□□ -0.39
PTCH1-207ENST00000429896 CD300LGQ6UXG3 332 aa12.6□□□□□ -0.39
PTCH1-207ENST00000429896 THOC6Q86W42 341 aaKnown RBP12.6□□□□□ -0.39
PTCH1-207ENST00000429896 CAMKVQ8NCB2 501 aa12.6□□□□□ -0.39
PTCH1-207ENST00000429896 TWIST2Q8WVJ9 160 aa12.6□□□□□ -0.39
PTCH1-207ENST00000429896 EFCAB11Q9BUY7 163 aa12.6□□□□□ -0.39
PTCH1-207ENST00000429896 DDX18Q9NVP1 670 aaKnown RBP12.6□□□□□ -0.39
PTCH1-207ENST00000429896 HRASLS2Q9NWW9 162 aa12.6□□□□□ -0.39
PTCH1-207ENST00000429896 A0A0J9YVX5 310 aa12.6□□□□□ -0.39
PTCH1-207ENST00000429896 PENKP01210 267 aaPredicted RBP12.6□□□□□ -0.39
PTCH1-207ENST00000429896 CLUP10909 449 aa12.6□□□□□ -0.39
PTCH1-207ENST00000429896 POLR2CP19387 275 aaPredicted RBP12.6□□□□□ -0.39
PTCH1-207ENST00000429896 MPSTP25325 297 aa12.6□□□□□ -0.39
PTCH1-207ENST00000429896 TALDO1P37837 337 aa12.6□□□□□ -0.39
PTCH1-207ENST00000429896 IRF4Q15306 451 aa12.6□□□□□ -0.39
PTCH1-207ENST00000429896 HSD11B1LQ7Z5J1 315 aa12.6□□□□□ -0.39
PTCH1-207ENST00000429896 ESAMQ96AP7 390 aa12.6□□□□□ -0.39
PTCH1-207ENST00000429896 NDC1Q9BTX1 674 aa12.6□□□□□ -0.39
PTCH1-207ENST00000429896 DAPK2Q9UIK4 370 aa12.6□□□□□ -0.39
PTCH1-207ENST00000429896 FBXW2Q9UKT8 454 aa12.6□□□□□ -0.39
PTCH1-207ENST00000429896 TIMM22Q9Y584 194 aa12.6□□□□□ -0.39
PTCH1-207ENST00000429896 SESN1Q9Y6P5 492 aa12.6□□□□□ -0.39
PTCH1-207ENST00000429896 CASP8AP2Q9UKL3 1982 aa12.6□□□□□ -0.39
PTCH1-207ENST00000429896 OR4F21O95013 312 aa12.59□□□□□ -0.39
PTCH1-207ENST00000429896 POU2F2P09086 479 aa12.59□□□□□ -0.39
PTCH1-207ENST00000429896 LEPRP48357 1165 aaKnown RBP12.59□□□□□ -0.39
PTCH1-207ENST00000429896 SEPHS1P49903 392 aa12.59□□□□□ -0.39
PTCH1-207ENST00000429896 BIKQ13323 160 aa12.59□□□□□ -0.39
PTCH1-207ENST00000429896 NRF1Q16656 503 aa12.59□□□□□ -0.39
PTCH1-207ENST00000429896 SPATA19Q7Z5L4 167 aa12.59□□□□□ -0.39
PTCH1-207ENST00000429896 KHSRPQ92945 711 aaKnown RBP eCLIP12.59□□□□□ -0.39
PTCH1-207ENST00000429896 PNPOQ9NVS9 261 aa12.59□□□□□ -0.39
PTCH1-207ENST00000429896 AP3M1Q9Y2T2 418 aa12.59□□□□□ -0.39
PTCH1-207ENST00000429896 MUSKO15146 869 aa12.59□□□□□ -0.39
PTCH1-207ENST00000429896 BCAT2O15382 392 aaPredicted RBP12.59□□□□□ -0.39
PTCH1-207ENST00000429896 P2RY2P41231 377 aa12.59□□□□□ -0.39
PTCH1-207ENST00000429896 SIX1Q15475 284 aaPredicted RBP12.59□□□□□ -0.39
PTCH1-207ENST00000429896 TRIQKQ629K1 86 aa12.59□□□□□ -0.39
PTCH1-207ENST00000429896 NEK5Q6P3R8 708 aa12.59□□□□□ -0.39
PTCH1-207ENST00000429896 RANBP10Q6VN20 620 aa12.59□□□□□ -0.39
PTCH1-207ENST00000429896 KDM1BQ8NB78 822 aa12.59□□□□□ -0.39
PTCH1-207ENST00000429896 C19orf60Q96EN9 201 aa12.59□□□□□ -0.39
PTCH1-207ENST00000429896 POLR1BQ9H9Y6 1135 aa12.59□□□□□ -0.39
PTCH1-207ENST00000429896 NEUROD4Q9HD90 331 aa12.59□□□□□ -0.39
PTCH1-207ENST00000429896 ACSS2Q9NR19 701 aa12.59□□□□□ -0.39
PTCH1-207ENST00000429896 MMP17Q9ULZ9 603 aa12.59□□□□□ -0.39
PTCH1-207ENST00000429896 FAM221BA6H8Z2 402 aa12.59□□□□□ -0.39
PTCH1-207ENST00000429896 PAICSP22234 425 aaKnown RBP12.59□□□□□ -0.39
PTCH1-207ENST00000429896 PGFP49763 221 aa12.59□□□□□ -0.39
PTCH1-207ENST00000429896 MAPK12P53778 367 aa12.59□□□□□ -0.39
PTCH1-207ENST00000429896 KCNC3Q14003 757 aa12.59□□□□□ -0.39
PTCH1-207ENST00000429896 DGCR6Q14129 220 aa12.59□□□□□ -0.39
PTCH1-207ENST00000429896 SLBPQ14493 270 aaKnown RBP eCLIP12.59□□□□□ -0.39
PTCH1-207ENST00000429896 RNF43Q68DV7 783 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms