RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 KLK1P06870 262 aa15.08■□□□□ 0
PTPRF-206ENST00000429895 CD47Q08722 323 aa15.08■□□□□ 0
PTPRF-206ENST00000429895 ARHGAP40Q5TG30 622 aa15.08■□□□□ 0
PTPRF-206ENST00000429895 P2RY8Q86VZ1 359 aa15.08■□□□□ 0
PTPRF-206ENST00000429895 TMEM156Q8N614 296 aa15.08■□□□□ 0
PTPRF-206ENST00000429895 HGSNATQ68CP4 663 aa15.08■□□□□ 0
PTPRF-206ENST00000429895 MBOAT1Q6ZNC8 495 aa15.08■□□□□ 0
PTPRF-206ENST00000429895 ZNF662Q6ZS27 426 aa15.08■□□□□ 0
PTPRF-206ENST00000429895 COMMD3Q9UBI1 195 aa15.08■□□□□ 0
PTPRF-206ENST00000429895 TAC3Q9UHF0 121 aa15.08■□□□□ 0
PTPRF-206ENST00000429895 PDCD5O14737 125 aa15.07■□□□□ 0
PTPRF-206ENST00000429895 CLEC3AO75596 197 aa15.07■□□□□ 0
PTPRF-206ENST00000429895 ITGB1P05556 798 aa15.07■□□□□ 0
PTPRF-206ENST00000429895 ZNF806P0C7X5 589 aa15.07■□□□□ 0
PTPRF-206ENST00000429895 GRM2Q14416 872 aa15.07■□□□□ 0
PTPRF-206ENST00000429895 TRNAU1APQ9NX07 287 aaKnown RBP15.07■□□□□ 0
PTPRF-206ENST00000429895 CCDC59Q9P031 241 aaKnown RBP15.07■□□□□ 0
PTPRF-206ENST00000429895 TLR6Q9Y2C9 796 aa15.07■□□□□ 0
PTPRF-206ENST00000429895 ZNF536O15090 1300 aa15.07■□□□□ 0
PTPRF-206ENST00000429895 K7EPI3 171 aa15.07■□□□□ 0
PTPRF-206ENST00000429895 TLE2Q04725 743 aa15.07■□□□□ 0
PTPRF-206ENST00000429895 ARFRP1Q13795 201 aa15.07■□□□□ 0
PTPRF-206ENST00000429895 C1orf94Q6P1W5 598 aa15.07■□□□□ 0
PTPRF-206ENST00000429895 ZNF676Q8N7Q3 588 aa15.07■□□□□ 0
PTPRF-206ENST00000429895 NODALQ96S42 347 aa15.07■□□□□ 0
PTPRF-206ENST00000429895 SLC35A5Q9BS91 424 aa15.07■□□□□ 0
PTPRF-206ENST00000429895 GATA5Q9BWX5 397 aaPredicted RBP15.07■□□□□ 0
PTPRF-206ENST00000429895 ZCCHC3Q9NUD5 404 aaKnown RBP15.07■□□□□ 0
PTPRF-206ENST00000429895 B4GALT2O60909 372 aa15.07■□□□□ 0
PTPRF-206ENST00000429895 AOC2O75106 756 aa15.07■□□□□ 0
PTPRF-206ENST00000429895 KLHL26Q53HC5 615 aa15.07■□□□□ 0
PTPRF-206ENST00000429895 TXNDC8Q6A555 127 aa15.07■□□□□ 0
PTPRF-206ENST00000429895 Q6ZVU0 165 aa15.07■□□□□ 0
PTPRF-206ENST00000429895 SPATC1Q76KD6 591 aa15.07■□□□□ 0
PTPRF-206ENST00000429895 GPALPP1Q8IXQ4 340 aa15.07■□□□□ 0
PTPRF-206ENST00000429895 SAMD14Q8IZD0 417 aaPredicted RBP15.07■□□□□ 0
PTPRF-206ENST00000429895 SVOPLQ8N434 492 aa15.07■□□□□ 0
PTPRF-206ENST00000429895 OR4K17Q8NGC6 315 aa15.07■□□□□ 0
PTPRF-206ENST00000429895 CENPNQ96H22 339 aaPredicted RBP15.07■□□□□ 0
PTPRF-206ENST00000429895 C8orf48Q96LL4 319 aa15.07■□□□□ 0
PTPRF-206ENST00000429895 CDC14AQ9UNH5 594 aa15.07■□□□□ 0
PTPRF-206ENST00000429895 YIPF1Q9Y548 306 aa15.07■□□□□ 0
PTPRF-206ENST00000429895 PRAMEF14Q5SWL7 426 aa15.07■□□□□ 0
PTPRF-206ENST00000429895 PRAMEF13Q5VWM6 474 aa15.07■□□□□ 0
PTPRF-206ENST00000429895 NUDT13Q86X67 352 aa15.07■□□□□ 0
PTPRF-206ENST00000429895 OR4E2Q8NGC2 313 aa15.07■□□□□ 0
PTPRF-206ENST00000429895 CLEC4DQ8WXI8 215 aa15.07■□□□□ 0
PTPRF-206ENST00000429895 CNTN6Q9UQ52 1028 aa15.07■□□□□ 0
PTPRF-206ENST00000429895 H0YGN5 161 aa15.07■□□□□ 0
PTPRF-206ENST00000429895 MMP20O60882 483 aa15.07■□□□□ 0
PTPRF-206ENST00000429895 TSPAN9O75954 239 aa15.07■□□□□ 0
PTPRF-206ENST00000429895 SCGB1D2O95969 90 aa15.07■□□□□ 0
PTPRF-206ENST00000429895 HNRNPH3P31942 346 aaKnown RBP15.07■□□□□ 0
PTPRF-206ENST00000429895 TAS2R39P59534 338 aa15.07■□□□□ 0
PTPRF-206ENST00000429895 ZNF611Q8N823 705 aa15.07■□□□□ 0
PTPRF-206ENST00000429895 PCDH19Q8TAB3 1148 aa15.07■□□□□ 0
PTPRF-206ENST00000429895 SLC22A18Q96BI1 424 aa15.07■□□□□ 0
PTPRF-206ENST00000429895 KCNC2Q96PR1 638 aa15.07■□□□□ 0
PTPRF-206ENST00000429895 FBXL12Q9NXK8 326 aa15.07■□□□□ 0
PTPRF-206ENST00000429895 TMEM98Q9Y2Y6 226 aa15.07■□□□□ 0
PTPRF-206ENST00000429895 A0A0G2JLL6 359 aaPredicted RBP15.06■□□□□ 0
PTPRF-206ENST00000429895 OR14I1A6ND48 311 aa15.06■□□□□ 0
PTPRF-206ENST00000429895 TRMUO75648 421 aaKnown RBP15.06■□□□□ 0
PTPRF-206ENST00000429895 MTHFD1P11586 935 aaKnown RBP15.06■□□□□ 0
PTPRF-206ENST00000429895 CSTF1Q05048 431 aaKnown RBP15.06■□□□□ 0
PTPRF-206ENST00000429895 TNFAIP8L3Q5GJ75 292 aa15.06■□□□□ 0
PTPRF-206ENST00000429895 SYPL2Q5VXT5 272 aa15.06■□□□□ 0
PTPRF-206ENST00000429895 PYHIN1Q6K0P9 492 aa15.06■□□□□ 0
PTPRF-206ENST00000429895 PRRT2Q7Z6L0 340 aaPredicted RBP15.06■□□□□ 0
PTPRF-206ENST00000429895 NCSTNQ92542 709 aa15.06■□□□□ 0
PTPRF-206ENST00000429895 ZNF180Q9UJW8 692 aa15.06■□□□□ 0
PTPRF-206ENST00000429895 PRORSD1PA6NEY8 169 aa15.06■□□□□ 0
PTPRF-206ENST00000429895 SMAD9O15198 467 aaKnown RBP15.06■□□□□ 0
PTPRF-206ENST00000429895 IL33O95760 270 aa15.06■□□□□ 0
PTPRF-206ENST00000429895 HLA-DQB2P05538 268 aa15.06■□□□□ 0
PTPRF-206ENST00000429895 HMGCS1Q01581 520 aa15.06■□□□□ 0
PTPRF-206ENST00000429895 OR8H1Q8NGG4 311 aa15.06■□□□□ 0
PTPRF-206ENST00000429895 RGMAQ96B86 450 aa15.06■□□□□ 0
PTPRF-206ENST00000429895 ADAD1Q96M93 576 aaKnown RBP15.06■□□□□ 0
PTPRF-206ENST00000429895 EDNRAP25101 427 aa15.06■□□□□ 0
PTPRF-206ENST00000429895 NRIP1P48552 1158 aa15.06■□□□□ 0
PTPRF-206ENST00000429895 HCAR3P49019 387 aa15.06■□□□□ 0
PTPRF-206ENST00000429895 CHRNA6Q15825 494 aa15.06■□□□□ 0
PTPRF-206ENST00000429895 INAVAQ3KP66 663 aa15.06■□□□□ 0
PTPRF-206ENST00000429895 ZNF548Q8NEK5 533 aaPredicted RBP15.06■□□□□ 0
PTPRF-206ENST00000429895 NKD2Q969F2 451 aaPredicted RBP15.06■□□□□ 0
PTPRF-206ENST00000429895 COL21A1Q96P44 957 aa15.06■□□□□ 0
PTPRF-206ENST00000429895 SMURF2Q9HAU4 748 aa15.06■□□□□ 0
PTPRF-206ENST00000429895 ZNF224Q9NZL3 707 aa15.06■□□□□ 0
PTPRF-206ENST00000429895 RAB26Q9ULW5 256 aa15.06■□□□□ 0
PTPRF-206ENST00000429895 OPN1SWP03999 348 aa15.06■□□□□ 0
PTPRF-206ENST00000429895 OR12D2P58182 307 aa15.06■□□□□ 0
PTPRF-206ENST00000429895 ODF4Q2M2E3 257 aa15.06■□□□□ 0
PTPRF-206ENST00000429895 SPIN3Q5JUX0 258 aa15.06■□□□□ 0
PTPRF-206ENST00000429895 C7orf57Q8NEG2 295 aa15.06■□□□□ 0
PTPRF-206ENST00000429895 TESCQ96BS2 214 aa15.06■□□□□ 0
PTPRF-206ENST00000429895 MIPEPQ99797 713 aa15.06■□□□□ 0
PTPRF-206ENST00000429895 DTLQ9NZJ0 730 aa15.06■□□□□ 0
PTPRF-206ENST00000429895 WNT6Q9Y6F9 365 aa15.06■□□□□ 0
PTPRF-206ENST00000429895 ZSCAN5BA6NJL1 495 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms