RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 TRAF6Q9Y4K3 522 aa8.61□□□□□ -1.03
SMC6-204ENST00000428868 TNPO3Q9Y5L0 923 aaKnown RBP8.61□□□□□ -1.03
SMC6-204ENST00000428868 DNAJC15Q9Y5T4 150 aa8.61□□□□□ -1.03
SMC6-204ENST00000428868 MYO15AQ9UKN7 3530 aa8.61□□□□□ -1.03
SMC6-204ENST00000428868 FRYLO94915 3013 aa8.61□□□□□ -1.03
SMC6-204ENST00000428868 PABPN1LA6NDY0 278 aaKnown RBP8.6□□□□□ -1.03
SMC6-204ENST00000428868 PIP5K1BO14986 540 aa8.6□□□□□ -1.03
SMC6-204ENST00000428868 HDAC3O15379 428 aa8.6□□□□□ -1.03
SMC6-204ENST00000428868 NRP2O60462 931 aa8.6□□□□□ -1.03
SMC6-204ENST00000428868 DIAPH2O60879 1101 aa8.6□□□□□ -1.03
SMC6-204ENST00000428868 KCNJ13O60928 360 aa8.6□□□□□ -1.03
SMC6-204ENST00000428868 SDC3O75056 442 aa8.6□□□□□ -1.03
SMC6-204ENST00000428868 ESRRBO95718 433 aa8.6□□□□□ -1.03
SMC6-204ENST00000428868 CAPN1P07384 714 aa8.6□□□□□ -1.03
SMC6-204ENST00000428868 F3P13726 295 aa8.6□□□□□ -1.03
SMC6-204ENST00000428868 NME1P15531 152 aaKnown RBP8.6□□□□□ -1.03
SMC6-204ENST00000428868 EPB42P16452 691 aa8.6□□□□□ -1.03
SMC6-204ENST00000428868 VARSP26640 1264 aaKnown RBP8.6□□□□□ -1.03
SMC6-204ENST00000428868 PKLRP30613 574 aa8.6□□□□□ -1.03
SMC6-204ENST00000428868 SLC19A1P41440 591 aa8.6□□□□□ -1.03
SMC6-204ENST00000428868 HNMTP50135 292 aa8.6□□□□□ -1.03
SMC6-204ENST00000428868 LRP8Q14114 963 aa8.6□□□□□ -1.03
SMC6-204ENST00000428868 ZSCAN26Q16670 478 aa8.6□□□□□ -1.03
SMC6-204ENST00000428868 PRRT3Q5FWE3 981 aa8.6□□□□□ -1.03
SMC6-204ENST00000428868 LYSMD4Q5XG99 296 aa8.6□□□□□ -1.03
SMC6-204ENST00000428868 TMEM198Q66K66 360 aa8.6□□□□□ -1.03
SMC6-204ENST00000428868 ABRAXAS1Q6UWZ7 409 aa8.6□□□□□ -1.03
SMC6-204ENST00000428868 LPCAT2Q7L5N7 544 aa8.6□□□□□ -1.03
SMC6-204ENST00000428868 ZNF761Q86XN6 746 aaPredicted RBP8.6□□□□□ -1.03
SMC6-204ENST00000428868 FAM20CQ8IXL6 584 aa8.6□□□□□ -1.03
SMC6-204ENST00000428868 SYTL1Q8IYJ3 562 aa8.6□□□□□ -1.03
SMC6-204ENST00000428868 TBC1D21Q8IYX1 336 aa8.6□□□□□ -1.03
SMC6-204ENST00000428868 NAGSQ8N159 534 aa8.6□□□□□ -1.03
SMC6-204ENST00000428868 FBXL6Q8N531 539 aa8.6□□□□□ -1.03
SMC6-204ENST00000428868 FITM2Q8N6M3 262 aa8.6□□□□□ -1.03
SMC6-204ENST00000428868 OR52E1Q8NGJ3 308 aa8.6□□□□□ -1.03
SMC6-204ENST00000428868 OR2T11Q8NH01 316 aa8.6□□□□□ -1.03
SMC6-204ENST00000428868 TWIST2Q8WVJ9 160 aa8.6□□□□□ -1.03
SMC6-204ENST00000428868 NELL1Q92832 810 aa8.6□□□□□ -1.03
SMC6-204ENST00000428868 RAD51AP1Q96B01 352 aa8.6□□□□□ -1.03
SMC6-204ENST00000428868 SLC45A3Q96JT2 553 aa8.6□□□□□ -1.03
SMC6-204ENST00000428868 SGPP1Q9BX95 441 aa8.6□□□□□ -1.03
SMC6-204ENST00000428868 MYLK2Q9H1R3 596 aa8.6□□□□□ -1.03
SMC6-204ENST00000428868 EML4Q9HC35 981 aaKnown RBP8.6□□□□□ -1.03
SMC6-204ENST00000428868 FARSBQ9NSD9 589 aaKnown RBP8.6□□□□□ -1.03
SMC6-204ENST00000428868 HEY2Q9UBP5 337 aa8.6□□□□□ -1.03
SMC6-204ENST00000428868 PCOLCE2Q9UKZ9 415 aa8.6□□□□□ -1.03
SMC6-204ENST00000428868 G3BP2Q9UN86 482 aaKnown RBP8.6□□□□□ -1.03
SMC6-204ENST00000428868 ANGPTL3Q9Y5C1 460 aa8.6□□□□□ -1.03
SMC6-204ENST00000428868 COL27A1Q8IZC6 1860 aaPredicted RBP8.6□□□□□ -1.03
SMC6-204ENST00000428868 ATP6AP2A0A1C7CYW4 349 aa8.59□□□□□ -1.03
SMC6-204ENST00000428868 KLHL33A6NCF5 533 aa8.59□□□□□ -1.03
SMC6-204ENST00000428868 E9PBE3 544 aa8.59□□□□□ -1.03
SMC6-204ENST00000428868 VILLO15195 856 aa8.59□□□□□ -1.03
SMC6-204ENST00000428868 BCAT2O15382 392 aaPredicted RBP8.59□□□□□ -1.03
SMC6-204ENST00000428868 KLHL41O60662 606 aa8.59□□□□□ -1.03
SMC6-204ENST00000428868 ATP6AP2O75787 350 aa8.59□□□□□ -1.03
SMC6-204ENST00000428868 MLYCDO95822 493 aa8.59□□□□□ -1.03
SMC6-204ENST00000428868 CSF2P04141 144 aa8.59□□□□□ -1.03
SMC6-204ENST00000428868 FGF4P08620 206 aa8.59□□□□□ -1.03
SMC6-204ENST00000428868 LINC00032P0C843 101 aa8.59□□□□□ -1.03
SMC6-204ENST00000428868 CTSEP14091 401 aa8.59□□□□□ -1.03
SMC6-204ENST00000428868 AVPR2P30518 371 aa8.59□□□□□ -1.03
SMC6-204ENST00000428868 ARL1P40616 181 aaPredicted RBP8.59□□□□□ -1.03
SMC6-204ENST00000428868 MAPK9P45984 424 aa8.59□□□□□ -1.03
SMC6-204ENST00000428868 INHBCP55103 352 aa8.59□□□□□ -1.03
SMC6-204ENST00000428868 PKNOX1P55347 436 aa8.59□□□□□ -1.03
SMC6-204ENST00000428868 MAZP56270 477 aaKnown RBP8.59□□□□□ -1.03
SMC6-204ENST00000428868 MEF2AQ02078 507 aaPredicted RBP8.59□□□□□ -1.03
SMC6-204ENST00000428868 ILF3Q12906 894 aaKnown RBP eCLIP8.59□□□□□ -1.03
SMC6-204ENST00000428868 CDC16Q13042 620 aa8.59□□□□□ -1.03
SMC6-204ENST00000428868 IFT88Q13099 833 aa8.59□□□□□ -1.03
SMC6-204ENST00000428868 CHIT1Q13231 466 aa8.59□□□□□ -1.03
SMC6-204ENST00000428868 UBAP2LQ14157 1087 aaKnown RBP8.59□□□□□ -1.03
SMC6-204ENST00000428868 SHBQ15464 509 aa8.59□□□□□ -1.03
SMC6-204ENST00000428868 CYP2A13Q16696 494 aa8.59□□□□□ -1.03
SMC6-204ENST00000428868 KIF19Q2TAC6 998 aa8.59□□□□□ -1.03
SMC6-204ENST00000428868 LSM12Q3MHD2 195 aaKnown RBP8.59□□□□□ -1.03
SMC6-204ENST00000428868 WDR45BQ5MNZ6 344 aa8.59□□□□□ -1.03
SMC6-204ENST00000428868 CATSPEREQ5SY80 951 aa8.59□□□□□ -1.03
SMC6-204ENST00000428868 PRAMEF13Q5VWM6 474 aa8.59□□□□□ -1.03
SMC6-204ENST00000428868 WASH2PQ6VEQ5 465 aa8.59□□□□□ -1.03
SMC6-204ENST00000428868 ZNF771Q7L3S4 317 aaPredicted RBP8.59□□□□□ -1.03
SMC6-204ENST00000428868 MILR1Q7Z6M3 343 aa8.59□□□□□ -1.03
SMC6-204ENST00000428868 TAF8Q7Z7C8 310 aa8.59□□□□□ -1.03
SMC6-204ENST00000428868 MTDHQ86UE4 582 aaKnown RBP8.59□□□□□ -1.03
SMC6-204ENST00000428868 IQCHQ86VS3 1027 aa8.59□□□□□ -1.03
SMC6-204ENST00000428868 TREML1Q86YW5 311 aa8.59□□□□□ -1.03
SMC6-204ENST00000428868 CLYBLQ8N0X4 340 aa8.59□□□□□ -1.03
SMC6-204ENST00000428868 ANKS4BQ8N8V4 417 aa8.59□□□□□ -1.03
SMC6-204ENST00000428868 FAM174AQ8TBP5 190 aa8.59□□□□□ -1.03
SMC6-204ENST00000428868 LMX1AQ8TE12 382 aa8.59□□□□□ -1.03
SMC6-204ENST00000428868 SLC37A2Q8TED4 501 aa8.59□□□□□ -1.03
SMC6-204ENST00000428868 NEIL2Q969S2 332 aa8.59□□□□□ -1.03
SMC6-204ENST00000428868 ATP6V1E2Q96A05 226 aa8.59□□□□□ -1.03
SMC6-204ENST00000428868 MAELQ96JY0 434 aaKnown RBP8.59□□□□□ -1.03
SMC6-204ENST00000428868 PHOX2BQ99453 314 aa8.59□□□□□ -1.03
SMC6-204ENST00000428868 NTMT1Q9BV86 223 aa8.59□□□□□ -1.03
SMC6-204ENST00000428868 ACAT2Q9BWD1 397 aa8.59□□□□□ -1.03
SMC6-204ENST00000428868 GSDMCQ9BYG8 508 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms