RNA–Protein interactions for RNA: ENST00000428848.7

CDH13-202, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDH13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-202ENST00000428848 BMP4P12644 408 aa8.62□□□□□ -1.03
CDH13-202ENST00000428848 SLC2A4P14672 509 aa8.62□□□□□ -1.03
CDH13-202ENST00000428848 PRKACGP22612 351 aa8.62□□□□□ -1.03
CDH13-202ENST00000428848 CD40LGP29965 261 aa8.62□□□□□ -1.03
CDH13-202ENST00000428848 SLC6A4P31645 630 aa8.62□□□□□ -1.03
CDH13-202ENST00000428848 S100A5P33763 92 aa8.62□□□□□ -1.03
CDH13-202ENST00000428848 PTGER3P43115 390 aa8.62□□□□□ -1.03
CDH13-202ENST00000428848 TPD52P55327 224 aaPredicted RBP8.62□□□□□ -1.03
CDH13-202ENST00000428848 RPL38P63173 70 aaKnown RBP8.62□□□□□ -1.03
CDH13-202ENST00000428848 SLC35A2P78381 396 aa8.62□□□□□ -1.03
CDH13-202ENST00000428848 PLIN5Q00G26 463 aa8.62□□□□□ -1.03
CDH13-202ENST00000428848 MAD2L1Q13257 205 aaPredicted RBP8.62□□□□□ -1.03
CDH13-202ENST00000428848 RAPSNQ13702 412 aa8.62□□□□□ -1.03
CDH13-202ENST00000428848 MAPKAPK3Q16644 382 aa8.62□□□□□ -1.03
CDH13-202ENST00000428848 FAM174BQ3ZCQ3 159 aa8.62□□□□□ -1.03
CDH13-202ENST00000428848 CTXN3Q4LDR2 81 aa8.62□□□□□ -1.03
CDH13-202ENST00000428848 SPANXN4Q5MJ08 99 aa8.62□□□□□ -1.03
CDH13-202ENST00000428848 WDR45BQ5MNZ6 344 aa8.62□□□□□ -1.03
CDH13-202ENST00000428848 LRIF1Q5T3J3 769 aa8.62□□□□□ -1.03
CDH13-202ENST00000428848 SYT6Q5T7P8 510 aaPredicted RBP8.62□□□□□ -1.03
CDH13-202ENST00000428848 TRIM46Q7Z4K8 759 aa8.62□□□□□ -1.03
CDH13-202ENST00000428848 ADAMTSL2Q86TH1 951 aa8.62□□□□□ -1.03
CDH13-202ENST00000428848 HIPK1Q86Z02 1210 aa8.62□□□□□ -1.03
CDH13-202ENST00000428848 TTC9BQ8N6N2 239 aa8.62□□□□□ -1.03
CDH13-202ENST00000428848 NAT16Q8N8M0 369 aa8.62□□□□□ -1.03
CDH13-202ENST00000428848 ATL1Q8WXF7 558 aa8.62□□□□□ -1.03
CDH13-202ENST00000428848 FBXO32Q969P5 355 aa8.62□□□□□ -1.03
CDH13-202ENST00000428848 FAM162AQ96A26 154 aa8.62□□□□□ -1.03
CDH13-202ENST00000428848 ZNF300Q96RE9 604 aaPredicted RBP8.62□□□□□ -1.03
CDH13-202ENST00000428848 SNX18Q96RF0 628 aa8.62□□□□□ -1.03
CDH13-202ENST00000428848 THUMPD3Q9BV44 507 aaKnown RBP8.62□□□□□ -1.03
CDH13-202ENST00000428848 RNF38Q9H0F5 515 aa8.62□□□□□ -1.03
CDH13-202ENST00000428848 IPPKQ9H8X2 491 aa8.62□□□□□ -1.03
CDH13-202ENST00000428848 ELOVL2Q9NXB9 296 aa8.62□□□□□ -1.03
CDH13-202ENST00000428848 TBC1D14Q9P2M4 693 aa8.62□□□□□ -1.03
CDH13-202ENST00000428848 UBA2Q9UBT2 640 aaPredicted RBP8.62□□□□□ -1.03
CDH13-202ENST00000428848 LRFN2Q9ULH4 789 aa8.62□□□□□ -1.03
CDH13-202ENST00000428848 UGT2A1Q9Y4X1 527 aa8.62□□□□□ -1.03
CDH13-202ENST00000428848 PCDHGA10Q9Y5H3 936 aa8.62□□□□□ -1.03
CDH13-202ENST00000428848 HSPE1-MOB4S4R3N1 261 aa8.62□□□□□ -1.03
CDH13-202ENST00000428848 IQCF5A8MTL0 148 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 ANKRD66B4E2M5 251 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 PTGES3LE9PB15 166 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 GNGT2O14610 69 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 PRMT5O14744 637 aaPredicted RBP8.61□□□□□ -1.03
CDH13-202ENST00000428848 FFAR2O15552 330 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 HOXC11O43248 304 aaPredicted RBP8.61□□□□□ -1.03
CDH13-202ENST00000428848 XPNPEP2O43895 674 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 WDR47O94967 919 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 PGRP06401 933 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 HMBSP08397 361 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 ELNP15502 786 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 SELPP16109 830 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 FSHRP23945 695 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 CASP3P42574 277 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 NR4A2P43354 598 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 PPP5CP53041 499 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 GNG2P59768 71 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 TAF10Q12962 218 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 PPP1R8Q12972 351 aaKnown RBP8.61□□□□□ -1.03
CDH13-202ENST00000428848 COL19A1Q14993 1142 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 HIST2H2ACQ16777 129 aaPredicted RBP8.61□□□□□ -1.03
CDH13-202ENST00000428848 GTDC1Q4AE62 458 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 C10orf120Q5SQS8 335 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 CPZQ66K79 652 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 SHQ1Q6PI26 577 aaKnown RBP8.61□□□□□ -1.03
CDH13-202ENST00000428848 SUSD1Q6UWL2 747 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 MILR1Q7Z6M3 343 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 B3GNT8Q7Z7M8 397 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 CYP4Z1Q86W10 505 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 ZNF280BQ86YH2 543 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 LGI2Q8N0V4 545 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 CFAP52Q8N1V2 620 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 C10orf111Q8N326 155 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 Q8N9G6 341 aaPredicted RBP8.61□□□□□ -1.03
CDH13-202ENST00000428848 OR7A2PQ8NGA2 310 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 DNAJB8Q8NHS0 232 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 CNIH3Q8TBE1 160 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 DYNC2LI1Q8TCX1 351 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 NETO1Q8TDF5 533 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 ZNF296Q8WUU4 475 aaPredicted RBP8.61□□□□□ -1.03
CDH13-202ENST00000428848 ZBTB18Q99592 522 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 CPPED1Q9BRF8 314 aaPredicted RBP8.61□□□□□ -1.03
CDH13-202ENST00000428848 CINPQ9BW66 212 aaPredicted RBP8.61□□□□□ -1.03
CDH13-202ENST00000428848 CFHR5Q9BXR6 569 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 ALOXE3Q9BYJ1 711 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 PCDH12Q9NPG4 1184 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 SERHLQ9NQF3 203 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 SLC6A13Q9NSD5 602 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 VNN3Q9NY84 501 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 NPAP1Q9NZP6 1156 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.61□□□□□ -1.03
CDH13-202ENST00000428848 ERVW-1Q9UQF0 538 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 MAN2B2Q9Y2E5 1009 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 PCDHGA3Q9Y5H0 932 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 SCN8AQ9UQD0 1980 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 ZNF106Q9H2Y7 1883 aaKnown RBP8.61□□□□□ -1.03
CDH13-202ENST00000428848 LOC105371267A0A1B0GV96 52 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 SAGE2PA6NJ88 616 aa8.61□□□□□ -1.03
CDH13-202ENST00000428848 E5RI56 91 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms