RNA–Protein interactions for RNA: ENST00000428828.1

CECR3-201, Transcript of cat eye syndrome chromosome region, candidate 3, humanhuman

TSL 1 (best) BASIC

Gene CECR3, Length 1,915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CECR3-201ENST00000428828 VAC14Q08AM6 782 aa11.15□□□□□ -0.62
CECR3-201ENST00000428828 STX5Q13190 355 aa11.15□□□□□ -0.62
CECR3-201ENST00000428828 DNASE1L3Q13609 305 aa11.15□□□□□ -0.62
CECR3-201ENST00000428828 CST6Q15828 149 aa11.15□□□□□ -0.62
CECR3-201ENST00000428828 NEDD8Q15843 81 aa11.15□□□□□ -0.62
CECR3-201ENST00000428828 SLC14A2Q15849 920 aa11.15□□□□□ -0.62
CECR3-201ENST00000428828 FXNQ16595 210 aa11.15□□□□□ -0.62
CECR3-201ENST00000428828 HIST2H2ACQ16777 129 aaPredicted RBP11.15□□□□□ -0.62
CECR3-201ENST00000428828 ZNF805Q5CZA5 627 aa11.15□□□□□ -0.62
CECR3-201ENST00000428828 SAMD4BQ5PRF9 694 aaKnown RBP11.15□□□□□ -0.62
CECR3-201ENST00000428828 PRSS48Q7RTY5 328 aa11.15□□□□□ -0.62
CECR3-201ENST00000428828 CAND1Q86VP6 1230 aaKnown RBP11.15□□□□□ -0.62
CECR3-201ENST00000428828 KLHDC8BQ8IXV7 354 aa11.15□□□□□ -0.62
CECR3-201ENST00000428828 ELMOD2Q8IZ81 293 aa11.15□□□□□ -0.62
CECR3-201ENST00000428828 SPARTQ8N0X7 666 aa11.15□□□□□ -0.62
CECR3-201ENST00000428828 PGBD3Q8N328 593 aa11.15□□□□□ -0.62
CECR3-201ENST00000428828 CBR4Q8N4T8 237 aa11.15□□□□□ -0.62
CECR3-201ENST00000428828 DHRSXQ8N5I4 330 aa11.15□□□□□ -0.62
CECR3-201ENST00000428828 TMIEQ8NEW7 156 aa11.15□□□□□ -0.62
CECR3-201ENST00000428828 BLOC1S5Q8TDH9 187 aa11.15□□□□□ -0.62
CECR3-201ENST00000428828 GANCQ8TET4 914 aa11.15□□□□□ -0.62
CECR3-201ENST00000428828 LPGAT1Q92604 370 aa11.15□□□□□ -0.62
CECR3-201ENST00000428828 ISL2Q96A47 359 aa11.15□□□□□ -0.62
CECR3-201ENST00000428828 CENPNQ96H22 339 aaPredicted RBP11.15□□□□□ -0.62
CECR3-201ENST00000428828 PPP1R16AQ96I34 528 aa11.15□□□□□ -0.62
CECR3-201ENST00000428828 OR52B2Q96RD2 323 aa11.15□□□□□ -0.62
CECR3-201ENST00000428828 ADGRE3Q9BY15 652 aa11.15□□□□□ -0.62
CECR3-201ENST00000428828 TRIM15Q9C019 465 aa11.15□□□□□ -0.62
CECR3-201ENST00000428828 B3GNT4Q9C0J1 378 aa11.15□□□□□ -0.62
CECR3-201ENST00000428828 FANCEQ9HB96 536 aa11.15□□□□□ -0.62
CECR3-201ENST00000428828 AGPAT4Q9NRZ5 378 aa11.15□□□□□ -0.62
CECR3-201ENST00000428828 MOCS1Q9NZB8 636 aa11.15□□□□□ -0.62
CECR3-201ENST00000428828 IFT80Q9P2H3 777 aaPredicted RBP11.15□□□□□ -0.62
CECR3-201ENST00000428828 MAU2Q9Y6X3 613 aa11.15□□□□□ -0.62
CECR3-201ENST00000428828 LOC285095A0A1B0GVY8 99 aa11.14□□□□□ -0.63
CECR3-201ENST00000428828 A0A1W2PP55 124 aa11.14□□□□□ -0.63
CECR3-201ENST00000428828 A8MU76 341 aa11.14□□□□□ -0.63
CECR3-201ENST00000428828 M0R296 226 aa11.14□□□□□ -0.63
CECR3-201ENST00000428828 AURKAO14965 403 aa11.14□□□□□ -0.63
CECR3-201ENST00000428828 FZD6O60353 706 aa11.14□□□□□ -0.63
CECR3-201ENST00000428828 ATG13O75143 517 aa11.14□□□□□ -0.63
CECR3-201ENST00000428828 ALDH1A2O94788 518 aa11.14□□□□□ -0.63
CECR3-201ENST00000428828 HSPA4LO95757 839 aa11.14□□□□□ -0.63
CECR3-201ENST00000428828 DNTTP04053 509 aa11.14□□□□□ -0.63
CECR3-201ENST00000428828 NDUFV2P19404 249 aa11.14□□□□□ -0.63
CECR3-201ENST00000428828 HLA-DPA1P20036 260 aa11.14□□□□□ -0.63
CECR3-201ENST00000428828 MGAT1P26572 445 aa11.14□□□□□ -0.63
CECR3-201ENST00000428828 RPS14P62263 151 aaKnown RBP11.14□□□□□ -0.63
CECR3-201ENST00000428828 ADARB1P78563 741 aaKnown RBP11.14□□□□□ -0.63
CECR3-201ENST00000428828 TAGLNQ01995 201 aaKnown RBP11.14□□□□□ -0.63
CECR3-201ENST00000428828 CDH17Q12864 832 aa11.14□□□□□ -0.63
CECR3-201ENST00000428828 MTAPQ13126 283 aa11.14□□□□□ -0.63
CECR3-201ENST00000428828 POU6F1Q14863 301 aa11.14□□□□□ -0.63
CECR3-201ENST00000428828 DGUOKQ16854 277 aa11.14□□□□□ -0.63
CECR3-201ENST00000428828 SPATS1Q496A3 300 aa11.14□□□□□ -0.63
CECR3-201ENST00000428828 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.14□□□□□ -0.63
CECR3-201ENST00000428828 CERCAMQ5T4B2 595 aa11.14□□□□□ -0.63
CECR3-201ENST00000428828 MROH9Q5TGP6 573 aa11.14□□□□□ -0.63
CECR3-201ENST00000428828 CASC4Q6P4E1 433 aa11.14□□□□□ -0.63
CECR3-201ENST00000428828 CRTC3Q6UUV7 619 aa11.14□□□□□ -0.63
CECR3-201ENST00000428828 RANBP10Q6VN20 620 aa11.14□□□□□ -0.63
CECR3-201ENST00000428828 SLC16A12Q6ZSM3 486 aa11.14□□□□□ -0.63
CECR3-201ENST00000428828 SYT13Q7L8C5 426 aa11.14□□□□□ -0.63
CECR3-201ENST00000428828 Q8N9G6 341 aaPredicted RBP11.14□□□□□ -0.63
CECR3-201ENST00000428828 OR2T34Q8NGX1 318 aa11.14□□□□□ -0.63
CECR3-201ENST00000428828 RHOXF1Q8NHV9 184 aa11.14□□□□□ -0.63
CECR3-201ENST00000428828 PIH1D2Q8WWB5 315 aa11.14□□□□□ -0.63
CECR3-201ENST00000428828 LRIG1Q96JA1 1093 aa11.14□□□□□ -0.63
CECR3-201ENST00000428828 UBXN10Q96LJ8 280 aa11.14□□□□□ -0.63
CECR3-201ENST00000428828 SLC7A5P2Q9GIP4 190 aa11.14□□□□□ -0.63
CECR3-201ENST00000428828 ILKAPQ9H0C8 392 aaPredicted RBP11.14□□□□□ -0.63
CECR3-201ENST00000428828 CHRDQ9H2X0 955 aa11.14□□□□□ -0.63
CECR3-201ENST00000428828 SYTL2Q9HCH5 934 aa11.14□□□□□ -0.63
CECR3-201ENST00000428828 POLMQ9NP87 494 aaPredicted RBP11.14□□□□□ -0.63
CECR3-201ENST00000428828 CD93Q9NPY3 652 aa11.14□□□□□ -0.63
CECR3-201ENST00000428828 C20orf96Q9NUD7 363 aaPredicted RBP11.14□□□□□ -0.63
CECR3-201ENST00000428828 MID2Q9UJV3 735 aa11.14□□□□□ -0.63
CECR3-201ENST00000428828 ZNF229Q9UJW7 825 aa11.14□□□□□ -0.63
CECR3-201ENST00000428828 RAP2CQ9Y3L5 183 aa11.14□□□□□ -0.63
CECR3-201ENST00000428828 TRPM6Q9BX84 2022 aa11.14□□□□□ -0.63
CECR3-201ENST00000428828 ZNF106Q9H2Y7 1883 aaKnown RBP11.14□□□□□ -0.63
CECR3-201ENST00000428828 CHURC1-FNTBB4DL54 471 aa11.13□□□□□ -0.63
CECR3-201ENST00000428828 ANKRD66B4E2M5 251 aa11.13□□□□□ -0.63
CECR3-201ENST00000428828 UPK1BO75841 260 aa11.13□□□□□ -0.63
CECR3-201ENST00000428828 GABARAPO95166 117 aa11.13□□□□□ -0.63
CECR3-201ENST00000428828 ADH1BP00325 375 aa11.13□□□□□ -0.63
CECR3-201ENST00000428828 FGF1P05230 155 aa11.13□□□□□ -0.63
CECR3-201ENST00000428828 IL32P24001 234 aa11.13□□□□□ -0.63
CECR3-201ENST00000428828 ITGB7P26010 798 aa11.13□□□□□ -0.63
CECR3-201ENST00000428828 RPL10P27635 214 aaKnown RBP11.13□□□□□ -0.63
CECR3-201ENST00000428828 AP2S1P53680 142 aaPredicted RBP11.13□□□□□ -0.63
CECR3-201ENST00000428828 PLA2G16P53816 162 aa11.13□□□□□ -0.63
CECR3-201ENST00000428828 CNTN1Q12860 1018 aa11.13□□□□□ -0.63
CECR3-201ENST00000428828 FAM46CQ5VWP2 391 aa11.13□□□□□ -0.63
CECR3-201ENST00000428828 STEAP4Q687X5 459 aa11.13□□□□□ -0.63
CECR3-201ENST00000428828 DENND5AQ6IQ26 1287 aa11.13□□□□□ -0.63
CECR3-201ENST00000428828 UNC5AQ6ZN44 842 aa11.13□□□□□ -0.63
CECR3-201ENST00000428828 FKBP9P1Q75LS8 142 aa11.13□□□□□ -0.63
CECR3-201ENST00000428828 FAM124AQ86V42 546 aa11.13□□□□□ -0.63
CECR3-201ENST00000428828 EPHX4Q8IUS5 362 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms