RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 USP30Q70CQ3 517 aa8.76□□□□□ -1.01
CTNND1-208ENST00000428599 ALYREFQ86V81 257 aaKnown RBP8.76□□□□□ -1.01
CTNND1-208ENST00000428599 CPNE9Q8IYJ1 553 aa8.76□□□□□ -1.01
CTNND1-208ENST00000428599 SVOPLQ8N434 492 aa8.76□□□□□ -1.01
CTNND1-208ENST00000428599 CELF5Q8N6W0 485 aaKnown RBP8.76□□□□□ -1.01
CTNND1-208ENST00000428599 ZNF676Q8N7Q3 588 aa8.76□□□□□ -1.01
CTNND1-208ENST00000428599 SIDT2Q8NBJ9 832 aaKnown RBP8.76□□□□□ -1.01
CTNND1-208ENST00000428599 ABHD5Q8WTS1 349 aa8.76□□□□□ -1.01
CTNND1-208ENST00000428599 AKAP1Q92667 903 aaKnown RBP eCLIP8.76□□□□□ -1.017e-7■□□□□ 11.3
CTNND1-208ENST00000428599 TMEM68Q96MH6 324 aa8.76□□□□□ -1.01
CTNND1-208ENST00000428599 ASPNQ9BXN1 380 aa8.76□□□□□ -1.01
CTNND1-208ENST00000428599 UCK2Q9BZX2 261 aa8.76□□□□□ -1.01
CTNND1-208ENST00000428599 TTYH1Q9H313 450 aaPredicted RBP8.76□□□□□ -1.01
CTNND1-208ENST00000428599 FZD8Q9H461 694 aa8.76□□□□□ -1.01
CTNND1-208ENST00000428599 PTGES2Q9H7Z7 377 aa8.76□□□□□ -1.01
CTNND1-208ENST00000428599 LYARQ9NX58 379 aaKnown RBP8.76□□□□□ -1.01
CTNND1-208ENST00000428599 TMA7Q9Y2S6 64 aaKnown RBP8.76□□□□□ -1.01
CTNND1-208ENST00000428599 DNMT3AQ9Y6K1 912 aaPredicted RBP8.76□□□□□ -1.01
CTNND1-208ENST00000428599 PPEF2O14830 753 aa8.76□□□□□ -1.01
CTNND1-208ENST00000428599 ALOX15BO15296 676 aa8.76□□□□□ -1.01
CTNND1-208ENST00000428599 PCDHGA12O60330 932 aa8.76□□□□□ -1.01
CTNND1-208ENST00000428599 TPST2O60704 377 aa8.76□□□□□ -1.01
CTNND1-208ENST00000428599 DRD4P21917 467 aa8.76□□□□□ -1.01
CTNND1-208ENST00000428599 UGT1A3P35503 534 aa8.76□□□□□ -1.01
CTNND1-208ENST00000428599 CDKN1CP49918 316 aaPredicted RBP8.76□□□□□ -1.01
CTNND1-208ENST00000428599 NPY5RQ15761 445 aa8.76□□□□□ -1.01
CTNND1-208ENST00000428599 CARTPTQ16568 116 aa8.76□□□□□ -1.01
CTNND1-208ENST00000428599 FAM46DQ8NEK8 389 aa8.76□□□□□ -1.01
CTNND1-208ENST00000428599 GTPBP3Q969Y2 492 aaKnown RBP8.76□□□□□ -1.01
CTNND1-208ENST00000428599 RELTQ969Z4 430 aa8.76□□□□□ -1.01
CTNND1-208ENST00000428599 RPL10LQ96L21 214 aaKnown RBP8.76□□□□□ -1.01
CTNND1-208ENST00000428599 SEC61A2Q9H9S3 476 aa8.76□□□□□ -1.01
CTNND1-208ENST00000428599 TBC1D17Q9HA65 648 aa8.76□□□□□ -1.01
CTNND1-208ENST00000428599 SRCP12931 536 aa8.76□□□□□ -1.01
CTNND1-208ENST00000428599 CSNK2A2P19784 350 aaPredicted RBP8.76□□□□□ -1.01
CTNND1-208ENST00000428599 ELF3P78545 371 aaPredicted RBP8.76□□□□□ -1.01
CTNND1-208ENST00000428599 PRKCDQ05655 676 aa8.76□□□□□ -1.01
CTNND1-208ENST00000428599 ZNF776Q68DI1 518 aaPredicted RBP8.76□□□□□ -1.01
CTNND1-208ENST00000428599 ZYG11AQ6WRX3 759 aa8.76□□□□□ -1.01
CTNND1-208ENST00000428599 TMEM126BQ8IUX1 230 aa8.76□□□□□ -1.01
CTNND1-208ENST00000428599 OR4C15Q8NGM1 316 aa8.76□□□□□ -1.01
CTNND1-208ENST00000428599 CCDC107Q8WV48 283 aa8.76□□□□□ -1.01
CTNND1-208ENST00000428599 MFSD3Q96ES6 412 aa8.76□□□□□ -1.01
CTNND1-208ENST00000428599 TMEM5Q9Y2B1 443 aa8.76□□□□□ -1.01
CTNND1-208ENST00000428599 FADS3Q9Y5Q0 445 aa8.76□□□□□ -1.01
CTNND1-208ENST00000428599 DUOX1Q9NRD9 1551 aa8.76□□□□□ -1.01
CTNND1-208ENST00000428599 AHDC1Q5TGY3 1603 aaPredicted RBP8.76□□□□□ -1.01
CTNND1-208ENST00000428599 E7EQ34 232 aa8.75□□□□□ -1.01
CTNND1-208ENST00000428599 PEX14O75381 377 aa8.75□□□□□ -1.01
CTNND1-208ENST00000428599 AP2A1O95782 977 aa8.75□□□□□ -1.01
CTNND1-208ENST00000428599 SYN1P17600 705 aa8.75□□□□□ -1.01
CTNND1-208ENST00000428599 GADD45AP24522 165 aa8.75□□□□□ -1.01
CTNND1-208ENST00000428599 DECR1Q16698 335 aa8.75□□□□□ -1.01
CTNND1-208ENST00000428599 CYP2U1Q7Z449 544 aa8.75□□□□□ -1.01
CTNND1-208ENST00000428599 SLITRK4Q8IW52 837 aa8.75□□□□□ -1.01
CTNND1-208ENST00000428599 PRELID2Q8N945 189 aa8.75□□□□□ -1.01
CTNND1-208ENST00000428599 Q8N9G6 341 aaPredicted RBP8.75□□□□□ -1.01
CTNND1-208ENST00000428599 RGMAQ96B86 450 aa8.75□□□□□ -1.01
CTNND1-208ENST00000428599 NXNL1Q96CM4 212 aa8.75□□□□□ -1.01
CTNND1-208ENST00000428599 GAL3ST1Q99999 423 aa8.75□□□□□ -1.01
CTNND1-208ENST00000428599 PAK6Q9NQU5 681 aaPredicted RBP8.75□□□□□ -1.01
CTNND1-208ENST00000428599 RIMKLBQ9ULI2 386 aa8.75□□□□□ -1.01
CTNND1-208ENST00000428599 EDDM13A0A1B0GTR0 161 aa8.75□□□□□ -1.01
CTNND1-208ENST00000428599 MYBPHLA2RUH7 354 aa8.75□□□□□ -1.01
CTNND1-208ENST00000428599 SNX3O60493 162 aa8.75□□□□□ -1.01
CTNND1-208ENST00000428599 SHBGP04278 402 aa8.75□□□□□ -1.01
CTNND1-208ENST00000428599 C2P06681 752 aa8.75□□□□□ -1.01
CTNND1-208ENST00000428599 L1CAMP32004 1257 aa8.75□□□□□ -1.01
CTNND1-208ENST00000428599 ECT2LQ008S8 904 aa8.75□□□□□ -1.01
CTNND1-208ENST00000428599 CD47Q08722 323 aa8.75□□□□□ -1.01
CTNND1-208ENST00000428599 TYSND1Q2T9J0 566 aa8.75□□□□□ -1.01
CTNND1-208ENST00000428599 DNAAF1Q8NEP3 725 aa8.75□□□□□ -1.01
CTNND1-208ENST00000428599 DNAJB8Q8NHS0 232 aa8.75□□□□□ -1.01
CTNND1-208ENST00000428599 AGAP2Q99490 1192 aa8.75□□□□□ -1.01
CTNND1-208ENST00000428599 TBC1D10AQ9BXI6 508 aa8.75□□□□□ -1.01
CTNND1-208ENST00000428599 C1orf109Q9NX04 203 aa8.75□□□□□ -1.01
CTNND1-208ENST00000428599 Q9Y3F1 56 aa8.75□□□□□ -1.01
CTNND1-208ENST00000428599 AK5Q9Y6K8 562 aa8.75□□□□□ -1.01
CTNND1-208ENST00000428599 E2F3O00716 465 aa8.75□□□□□ -1.01
CTNND1-208ENST00000428599 MID1O15344 667 aa8.75□□□□□ -1.01
CTNND1-208ENST00000428599 PLP2Q04941 152 aa8.75□□□□□ -1.01
CTNND1-208ENST00000428599 SCN1BQ07699 218 aa8.75□□□□□ -1.01
CTNND1-208ENST00000428599 TSTD2Q5T7W7 516 aa8.75□□□□□ -1.01
CTNND1-208ENST00000428599 ZNF611Q8N823 705 aa8.75□□□□□ -1.01
CTNND1-208ENST00000428599 FAM110BQ8TC76 370 aa8.75□□□□□ -1.01
CTNND1-208ENST00000428599 GRHL3Q8TE85 626 aa8.75□□□□□ -1.01
CTNND1-208ENST00000428599 NAT14Q8WUY8 206 aa8.75□□□□□ -1.01
CTNND1-208ENST00000428599 HNRNPABQ99729 332 aaKnown RBP8.75□□□□□ -1.01
CTNND1-208ENST00000428599 BCO2Q9BYV7 579 aa8.75□□□□□ -1.01
CTNND1-208ENST00000428599 FKBPLQ9UIM3 349 aa8.75□□□□□ -1.01
CTNND1-208ENST00000428599 PRKCHP24723 683 aa8.75□□□□□ -1.01
CTNND1-208ENST00000428599 LMO2P25791 158 aa8.75□□□□□ -1.01
CTNND1-208ENST00000428599 GSTT1P30711 240 aa8.75□□□□□ -1.01
CTNND1-208ENST00000428599 RBM34P42696 430 aaKnown RBP8.75□□□□□ -1.01
CTNND1-208ENST00000428599 ARPC4P59998 168 aa8.75□□□□□ -1.01
CTNND1-208ENST00000428599 RBM44Q6ZP01 1051 aaKnown RBP8.75□□□□□ -1.01
CTNND1-208ENST00000428599 TAS1R3Q7RTX0 852 aa8.75□□□□□ -1.01
CTNND1-208ENST00000428599 ZER1Q7Z7L7 766 aa8.75□□□□□ -1.01
CTNND1-208ENST00000428599 IQCHQ86VS3 1027 aa8.75□□□□□ -1.01
CTNND1-208ENST00000428599 CIR1Q86X95 450 aaPredicted RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms