RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 EBF4Q9BQW3 602 aa17.57■□□□□ 0.4
ARHGEF28-203ENST00000426542 POLR2J3Q9H1A7 115 aaKnown RBP17.57■□□□□ 0.4
ARHGEF28-203ENST00000426542 TTYH1Q9H313 450 aaPredicted RBP17.57■□□□□ 0.4
ARHGEF28-203ENST00000426542 ZDHHC3Q9NYG2 299 aa17.57■□□□□ 0.4
ARHGEF28-203ENST00000426542 GRHL1Q9NZI5 618 aa17.57■□□□□ 0.4
ARHGEF28-203ENST00000426542 NRP1O14786 923 aa17.57■□□□□ 0.4
ARHGEF28-203ENST00000426542 SERPINA3P01011 423 aa17.57■□□□□ 0.4
ARHGEF28-203ENST00000426542 APOC1P02654 83 aa17.57■□□□□ 0.4
ARHGEF28-203ENST00000426542 IMPDH1P20839 514 aa17.57■□□□□ 0.4
ARHGEF28-203ENST00000426542 RORCP51449 518 aa17.57■□□□□ 0.4
ARHGEF28-203ENST00000426542 XKP51811 444 aa17.57■□□□□ 0.4
ARHGEF28-203ENST00000426542 IQCCQ4KMZ1 466 aa17.57■□□□□ 0.4
ARHGEF28-203ENST00000426542 CLEC12AQ5QGZ9 265 aa17.57■□□□□ 0.4
ARHGEF28-203ENST00000426542 OR5AK3PQ8NH89 298 aa17.57■□□□□ 0.4
ARHGEF28-203ENST00000426542 HMGB4Q8WW32 186 aa17.57■□□□□ 0.4
ARHGEF28-203ENST00000426542 KCNC2Q96PR1 638 aa17.57■□□□□ 0.4
ARHGEF28-203ENST00000426542 PCDHGB7Q9Y5F8 929 aa17.57■□□□□ 0.4
ARHGEF28-203ENST00000426542 FER1L4A9Z1Z3 1794 aa17.57■□□□□ 0.4
ARHGEF28-203ENST00000426542 TOR1BO14657 336 aa17.57■□□□□ 0.4
ARHGEF28-203ENST00000426542 IRAK2O43187 625 aa17.57■□□□□ 0.4
ARHGEF28-203ENST00000426542 FUT4P22083 530 aa17.57■□□□□ 0.4
ARHGEF28-203ENST00000426542 GPR68Q15743 365 aa17.57■□□□□ 0.4
ARHGEF28-203ENST00000426542 NUDT13Q86X67 352 aa17.57■□□□□ 0.4
ARHGEF28-203ENST00000426542 RASGEF1AQ8N9B8 481 aa17.57■□□□□ 0.4
ARHGEF28-203ENST00000426542 FUBP3Q96I24 572 aaKnown RBP eCLIP17.57■□□□□ 0.4
ARHGEF28-203ENST00000426542 C11orf84Q9BUA3 381 aaPredicted RBP17.57■□□□□ 0.4
ARHGEF28-203ENST00000426542 F7P08709 466 aaPredicted RBP17.57■□□□□ 0.4
ARHGEF28-203ENST00000426542 SIRPB2Q5JXA9 342 aa17.57■□□□□ 0.4
ARHGEF28-203ENST00000426542 OR10G2Q8NGC3 310 aa17.57■□□□□ 0.4
ARHGEF28-203ENST00000426542 DGAT2Q96PD7 388 aa17.57■□□□□ 0.4
ARHGEF28-203ENST00000426542 MOCS1Q9NZB8 636 aa17.57■□□□□ 0.4
ARHGEF28-203ENST00000426542 PCBP2Q15366 365 aaKnown RBP eCLIP17.56■□□□□ 0.44e-6■□□□□ 9.8
ARHGEF28-203ENST00000426542 SGCBQ16585 318 aa17.56■□□□□ 0.4
ARHGEF28-203ENST00000426542 DPY19L1Q2PZI1 675 aa17.56■□□□□ 0.4
ARHGEF28-203ENST00000426542 MMAAQ8IVH4 418 aaKnown RBP17.56■□□□□ 0.4
ARHGEF28-203ENST00000426542 SLC39A3Q9BRY0 314 aa17.56■□□□□ 0.4
ARHGEF28-203ENST00000426542 PCDHAC1Q9H158 963 aa17.56■□□□□ 0.4
ARHGEF28-203ENST00000426542 FZD8Q9H461 694 aa17.56■□□□□ 0.4
ARHGEF28-203ENST00000426542 FZD4Q9ULV1 537 aa17.56■□□□□ 0.4
ARHGEF28-203ENST00000426542 CLCA3PQ9Y6N3 262 aa17.56■□□□□ 0.4
ARHGEF28-203ENST00000426542 GNSP15586 552 aa17.56■□□□□ 0.4
ARHGEF28-203ENST00000426542 ANKFN1Q8N957 763 aa17.56■□□□□ 0.4
ARHGEF28-203ENST00000426542 B3GNT4Q9C0J1 378 aa17.56■□□□□ 0.4
ARHGEF28-203ENST00000426542 GKN1Q9NS71 199 aa17.56■□□□□ 0.4
ARHGEF28-203ENST00000426542 RPL36Q9Y3U8 105 aaKnown RBP17.56■□□□□ 0.4
ARHGEF28-203ENST00000426542 WASF2Q9Y6W5 498 aa17.56■□□□□ 0.4
ARHGEF28-203ENST00000426542 MTX2O75431 263 aa17.56■□□□□ 0.4
ARHGEF28-203ENST00000426542 CSTF1Q05048 431 aaKnown RBP17.56■□□□□ 0.4
ARHGEF28-203ENST00000426542 SYVN1Q86TM6 617 aa17.56■□□□□ 0.4
ARHGEF28-203ENST00000426542 AUTS2Q8WXX7 1259 aa17.56■□□□□ 0.4
ARHGEF28-203ENST00000426542 RGMAQ96B86 450 aa17.56■□□□□ 0.4
ARHGEF28-203ENST00000426542 DNAJC5Q9H3Z4 198 aa17.56■□□□□ 0.4
ARHGEF28-203ENST00000426542 NDUFS4O43181 175 aa17.56■□□□□ 0.4
ARHGEF28-203ENST00000426542 OR1I1O60431 355 aa17.56■□□□□ 0.4
ARHGEF28-203ENST00000426542 SHOX2O60902 331 aaPredicted RBP17.56■□□□□ 0.4
ARHGEF28-203ENST00000426542 ECI2O75521 394 aa17.56■□□□□ 0.4
ARHGEF28-203ENST00000426542 PRH1P02810 166 aa17.56■□□□□ 0.4
ARHGEF28-203ENST00000426542 GBX2P52951 348 aaPredicted RBP17.56■□□□□ 0.4
ARHGEF28-203ENST00000426542 DNAJB7Q7Z6W7 309 aaPredicted RBP17.56■□□□□ 0.4
ARHGEF28-203ENST00000426542 KLHL36Q8N4N3 616 aa17.56■□□□□ 0.4
ARHGEF28-203ENST00000426542 TBL1XR1Q9BZK7 514 aa17.56■□□□□ 0.4
ARHGEF28-203ENST00000426542 VPS29Q9UBQ0 182 aa17.56■□□□□ 0.4
ARHGEF28-203ENST00000426542 NR2E1Q9Y466 385 aa17.56■□□□□ 0.4
ARHGEF28-203ENST00000426542 EFCAB9A8MZ26 197 aa17.56■□□□□ 0.4
ARHGEF28-203ENST00000426542 TPD52L2O43399 206 aaKnown RBP17.56■□□□□ 0.4
ARHGEF28-203ENST00000426542 CXCR1P25024 350 aa17.56■□□□□ 0.4
ARHGEF28-203ENST00000426542 HADHBP55084 474 aaKnown RBP17.56■□□□□ 0.4
ARHGEF28-203ENST00000426542 HMGCS1Q01581 520 aa17.56■□□□□ 0.4
ARHGEF28-203ENST00000426542 CRB2Q5IJ48 1285 aa17.56■□□□□ 0.4
ARHGEF28-203ENST00000426542 TPGS2Q68CL5 300 aa17.56■□□□□ 0.4
ARHGEF28-203ENST00000426542 NCBP2-AS2Q69YL0 99 aa17.56■□□□□ 0.4
ARHGEF28-203ENST00000426542 SLC22A18Q96BI1 424 aa17.56■□□□□ 0.4
ARHGEF28-203ENST00000426542 ZNF514Q96K75 400 aaPredicted RBP17.56■□□□□ 0.4
ARHGEF28-203ENST00000426542 LRRC3Q9BY71 257 aa17.56■□□□□ 0.4
ARHGEF28-203ENST00000426542 ZNF726A6NNF4 738 aa17.55■□□□□ 0.4
ARHGEF28-203ENST00000426542 HAS3O00219 553 aa17.55■□□□□ 0.4
ARHGEF28-203ENST00000426542 SLC22A2O15244 555 aa17.55■□□□□ 0.4
ARHGEF28-203ENST00000426542 PLGP00747 810 aaPredicted RBP17.55■□□□□ 0.4
ARHGEF28-203ENST00000426542 DSTNP60981 165 aa17.55■□□□□ 0.4
ARHGEF28-203ENST00000426542 CHAF1BQ13112 559 aa17.55■□□□□ 0.4
ARHGEF28-203ENST00000426542 PRAMEF14Q5SWL7 426 aa17.55■□□□□ 0.4
ARHGEF28-203ENST00000426542 PRAMEF13Q5VWM6 474 aa17.55■□□□□ 0.4
ARHGEF28-203ENST00000426542 POLR2J2Q9GZM3 115 aaKnown RBP17.55■□□□□ 0.4
ARHGEF28-203ENST00000426542 C12orf4Q9NQ89 552 aa17.55■□□□□ 0.4
ARHGEF28-203ENST00000426542 XPNPEP1Q9NQW7 623 aa17.55■□□□□ 0.4
ARHGEF28-203ENST00000426542 ZCCHC3Q9NUD5 404 aaKnown RBP17.55■□□□□ 0.4
ARHGEF28-203ENST00000426542 ZNF639Q9UID6 485 aa17.55■□□□□ 0.4
ARHGEF28-203ENST00000426542 NEMP2A6NFY4 417 aa17.55■□□□□ 0.4
ARHGEF28-203ENST00000426542 DUXAA6NLW8 204 aa17.55■□□□□ 0.4
ARHGEF28-203ENST00000426542 MAP3K8P41279 467 aa17.55■□□□□ 0.4
ARHGEF28-203ENST00000426542 NFATC2Q13469 925 aa17.55■□□□□ 0.4
ARHGEF28-203ENST00000426542 TMEM44Q2T9K0 475 aa17.55■□□□□ 0.4
ARHGEF28-203ENST00000426542 MBLAC2Q68D91 279 aa17.55■□□□□ 0.4
ARHGEF28-203ENST00000426542 ZNF527Q8NB42 609 aa17.55■□□□□ 0.4
ARHGEF28-203ENST00000426542 TSTD1Q8NFU3 115 aa17.55■□□□□ 0.4
ARHGEF28-203ENST00000426542 CCM2Q9BSQ5 444 aa17.55■□□□□ 0.4
ARHGEF28-203ENST00000426542 SIX2Q9NPC8 291 aa17.55■□□□□ 0.4
ARHGEF28-203ENST00000426542 PAK6Q9NQU5 681 aaPredicted RBP17.55■□□□□ 0.4
ARHGEF28-203ENST00000426542 GDAP2Q9NXN4 497 aa17.55■□□□□ 0.4
ARHGEF28-203ENST00000426542 ORC5O43913 435 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms