RNA–Protein interactions for RNA: ENST00000425231.2

CDCP1-202, Transcript of CUB domain containing protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCP1, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-202ENST00000425231 RNASEH2BQ5TBB1 312 aaKnown RBP20.7■□□□□ 0.9
CDCP1-202ENST00000425231 C1orf189Q5VU69 101 aa20.7■□□□□ 0.9
CDCP1-202ENST00000425231 FIGLAQ6QHK4 219 aa20.7■□□□□ 0.9
CDCP1-202ENST00000425231 MCATQ8IVS2 390 aaKnown RBP20.7■□□□□ 0.9
CDCP1-202ENST00000425231 PPIL6Q8IXY8 311 aa20.7■□□□□ 0.9
CDCP1-202ENST00000425231 ZBTB2Q8N680 514 aa20.7■□□□□ 0.9
CDCP1-202ENST00000425231 PROKR1Q8TCW9 393 aa20.7■□□□□ 0.9
CDCP1-202ENST00000425231 DHRS4Q9BTZ2 278 aa20.7■□□□□ 0.9
CDCP1-202ENST00000425231 ING2Q9H160 280 aa20.7■□□□□ 0.9
CDCP1-202ENST00000425231 EPN3Q9H201 632 aa20.7■□□□□ 0.9
CDCP1-202ENST00000425231 SRPK3Q9UPE1 567 aa20.7■□□□□ 0.9
CDCP1-202ENST00000425231 MED16Q9Y2X0 877 aa20.7■□□□□ 0.9
CDCP1-202ENST00000425231 A0A1W2PPV9 198 aa20.69■□□□□ 0.9
CDCP1-202ENST00000425231 ARGFXA6NJG6 315 aa20.69■□□□□ 0.9
CDCP1-202ENST00000425231 C9J4A7 227 aa20.69■□□□□ 0.9
CDCP1-202ENST00000425231 FKBP9O95302 570 aa20.69■□□□□ 0.9
CDCP1-202ENST00000425231 PDGFAP04085 211 aa20.69■□□□□ 0.9
CDCP1-202ENST00000425231 GRIA3P42263 894 aa20.69■□□□□ 0.9
CDCP1-202ENST00000425231 CLCN7P51798 805 aa20.69■□□□□ 0.9
CDCP1-202ENST00000425231 CHAF1BQ13112 559 aa20.69■□□□□ 0.9
CDCP1-202ENST00000425231 THOC5Q13769 683 aaKnown RBP20.69■□□□□ 0.9
CDCP1-202ENST00000425231 ZNF549Q6P9A3 640 aa20.69■□□□□ 0.9
CDCP1-202ENST00000425231 OR2A1Q8NGT9 310 aa20.69■□□□□ 0.9
CDCP1-202ENST00000425231 MAGEC3Q8TD91 643 aa20.69■□□□□ 0.9
CDCP1-202ENST00000425231 ZUFSPQ96AP4 578 aa20.69■□□□□ 0.9
CDCP1-202ENST00000425231 SLC30A3Q99726 388 aa20.69■□□□□ 0.9
CDCP1-202ENST00000425231 CLMPQ9H6B4 373 aa20.69■□□□□ 0.9
CDCP1-202ENST00000425231 INTS7Q9NVH2 962 aaKnown RBP20.69■□□□□ 0.9
CDCP1-202ENST00000425231 CCDC88CQ9P219 2028 aa20.69■□□□□ 0.9
CDCP1-202ENST00000425231 TSR3Q9UJK0 312 aaKnown RBP20.69■□□□□ 0.9
CDCP1-202ENST00000425231 MAD1L1Q9Y6D9 718 aa20.69■□□□□ 0.9
CDCP1-202ENST00000425231 MYO18BQ8IUG5 2567 aa20.68■□□□□ 0.9
CDCP1-202ENST00000425231 PCSK5Q92824 1860 aa20.68■□□□□ 0.9
CDCP1-202ENST00000425231 CTAGE9A4FU28 777 aa20.68■□□□□ 0.9
CDCP1-202ENST00000425231 USP27XA6NNY8 438 aa20.68■□□□□ 0.9
CDCP1-202ENST00000425231 TARM1B6A8C7 271 aa20.68■□□□□ 0.9
CDCP1-202ENST00000425231 E5RI56 91 aa20.68■□□□□ 0.9
CDCP1-202ENST00000425231 PSIP1O75475 530 aaKnown RBP20.68■□□□□ 0.9
CDCP1-202ENST00000425231 PSMB5P28074 263 aa20.68■□□□□ 0.9
CDCP1-202ENST00000425231 DCDP81605 110 aaKnown RBP20.68■□□□□ 0.9
CDCP1-202ENST00000425231 FASTKQ14296 549 aaKnown RBP20.68■□□□□ 0.9
CDCP1-202ENST00000425231 CYP2A13Q16696 494 aa20.68■□□□□ 0.9
CDCP1-202ENST00000425231 LONRF1Q17RB8 773 aa20.68■□□□□ 0.9
CDCP1-202ENST00000425231 KLHL38Q2WGJ6 581 aa20.68■□□□□ 0.9
CDCP1-202ENST00000425231 EEF1AKMT2Q5JPI9 291 aaKnown RBP20.68■□□□□ 0.9
CDCP1-202ENST00000425231 MLIPQ5VWP3 458 aa20.68■□□□□ 0.9
CDCP1-202ENST00000425231 ASB18Q6ZVZ8 466 aa20.68■□□□□ 0.9
CDCP1-202ENST00000425231 RAB42Q8N4Z0 105 aa20.68■□□□□ 0.9
CDCP1-202ENST00000425231 C17orf62Q9BQA9 187 aa20.68■□□□□ 0.9
CDCP1-202ENST00000425231 DDX47Q9H0S4 455 aaKnown RBP20.68■□□□□ 0.9
CDCP1-202ENST00000425231 MLXIPLQ9NP71 852 aa20.68■□□□□ 0.9
CDCP1-202ENST00000425231 FBXO6Q9NRD1 293 aaPredicted RBP20.68■□□□□ 0.9
CDCP1-202ENST00000425231 ENAMQ9NRM1 1142 aa20.68■□□□□ 0.9
CDCP1-202ENST00000425231 SPATA7Q9P0W8 599 aa20.68■□□□□ 0.9
CDCP1-202ENST00000425231 KLK4Q9Y5K2 254 aa20.68■□□□□ 0.9
CDCP1-202ENST00000425231 FAM169AQ9Y6X4 670 aa20.68■□□□□ 0.9
CDCP1-202ENST00000425231 ARHGEF33A8MVX0 844 aa20.67■□□□□ 0.9
CDCP1-202ENST00000425231 ERGP11308 486 aa20.67■□□□□ 0.9
CDCP1-202ENST00000425231 TCP1P17987 556 aaKnown RBP20.67■□□□□ 0.9
CDCP1-202ENST00000425231 SLC1A2P43004 574 aa20.67■□□□□ 0.9
CDCP1-202ENST00000425231 CCL11P51671 97 aa20.67■□□□□ 0.9
CDCP1-202ENST00000425231 KLRB1Q12918 225 aa20.67■□□□□ 0.9
CDCP1-202ENST00000425231 PPP1R7Q15435 360 aa20.67■□□□□ 0.9
CDCP1-202ENST00000425231 ZC3H12BQ5HYM0 836 aaKnown RBP20.67■□□□□ 0.9
CDCP1-202ENST00000425231 SPNS2Q8IVW8 549 aa20.67■□□□□ 0.9
CDCP1-202ENST00000425231 LMNTD2Q8IXW0 634 aa20.67■□□□□ 0.9
CDCP1-202ENST00000425231 OR2L3Q8NG85 312 aa20.67■□□□□ 0.9
CDCP1-202ENST00000425231 GIMAP7Q8NHV1 300 aa20.67■□□□□ 0.9
CDCP1-202ENST00000425231 SLCO2A1Q92959 643 aa20.67■□□□□ 0.9
CDCP1-202ENST00000425231 ZNF285Q96NJ3 590 aa20.67■□□□□ 0.9
CDCP1-202ENST00000425231 NDC1Q9BTX1 674 aa20.67■□□□□ 0.9
CDCP1-202ENST00000425231 ACSS2Q9NR19 701 aa20.67■□□□□ 0.9
CDCP1-202ENST00000425231 C20orf96Q9NUD7 363 aaPredicted RBP20.67■□□□□ 0.9
CDCP1-202ENST00000425231 TXLNGQ9NUQ3 528 aa20.67■□□□□ 0.9
CDCP1-202ENST00000425231 IRAK4Q9NWZ3 460 aa20.67■□□□□ 0.9
CDCP1-202ENST00000425231 PCYOX1Q9UHG3 505 aa20.67■□□□□ 0.9
CDCP1-202ENST00000425231 PADI2Q9Y2J8 665 aa20.67■□□□□ 0.9
CDCP1-202ENST00000425231 TNRC6AQ8NDV7 1962 aaKnown RBP20.66■□□□□ 0.9
CDCP1-202ENST00000425231 CTSVO60911 334 aa20.66■□□□□ 0.9
CDCP1-202ENST00000425231 CNOT3O75175 753 aaKnown RBP20.66■□□□□ 0.9
CDCP1-202ENST00000425231 NKAIN1Q4KMZ8 207 aa20.66■□□□□ 0.9
CDCP1-202ENST00000425231 COLEC12Q5KU26 742 aa20.66■□□□□ 0.9
CDCP1-202ENST00000425231 MRPL14Q6P1L8 145 aaKnown RBP20.66■□□□□ 0.9
CDCP1-202ENST00000425231 OR9A1PQ8NGU1 263 aa20.66■□□□□ 0.9
CDCP1-202ENST00000425231 MIPEPQ99797 713 aa20.66■□□□□ 0.9
CDCP1-202ENST00000425231 SLC22A11Q9NSA0 550 aa20.66■□□□□ 0.9
CDCP1-202ENST00000425231 IFT80Q9P2H3 777 aaPredicted RBP20.66■□□□□ 0.9
CDCP1-202ENST00000425231 KLHL42Q9P2K6 505 aa20.66■□□□□ 0.9
CDCP1-202ENST00000425231 FBXO5Q9UKT4 447 aa20.66■□□□□ 0.9
CDCP1-202ENST00000425231 PCDHGA9Q9Y5G4 932 aaKnown RBP20.66■□□□□ 0.9
CDCP1-202ENST00000425231 UBR5O95071 2799 aaPredicted RBP20.66■□□□□ 0.9
CDCP1-202ENST00000425231 PCM1Q15154 2024 aa20.65■□□□□ 0.9
CDCP1-202ENST00000425231 MYO1CO00159 1063 aa20.65■□□□□ 0.9
CDCP1-202ENST00000425231 DNALI1O14645 258 aaPredicted RBP20.65■□□□□ 0.9
CDCP1-202ENST00000425231 CEACAM4O75871 244 aa20.65■□□□□ 0.9
CDCP1-202ENST00000425231 HAUS5O94927 633 aa20.65■□□□□ 0.9
CDCP1-202ENST00000425231 IVDP26440 423 aa20.65■□□□□ 0.9
CDCP1-202ENST00000425231 YBX1P67809 324 aaKnown RBP20.65■□□□□ 0.9
CDCP1-202ENST00000425231 PTK6Q13882 451 aa20.65■□□□□ 0.9
CDCP1-202ENST00000425231 SSPNQ14714 243 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms