RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 DSPP15924 2871 aaKnown RBP10.55□□□□□ -0.72
USP49-204ENST00000423567 LOC101059948A0A1B0GTJ6 334 aa10.55□□□□□ -0.72
USP49-204ENST00000423567 PABPN1LA6NDY0 278 aaKnown RBP10.55□□□□□ -0.72
USP49-204ENST00000423567 GPR37O15354 613 aa10.55□□□□□ -0.72
USP49-204ENST00000423567 PSIP1O75475 530 aaKnown RBP10.55□□□□□ -0.72
USP49-204ENST00000423567 TIAF1O95411 115 aa10.55□□□□□ -0.72
USP49-204ENST00000423567 SYF2O95926 243 aaKnown RBP10.55□□□□□ -0.72
USP49-204ENST00000423567 AHSGP02765 367 aa10.55□□□□□ -0.72
USP49-204ENST00000423567 ITGB2P05107 769 aa10.55□□□□□ -0.72
USP49-204ENST00000423567 MCM3P25205 808 aa10.55□□□□□ -0.72
USP49-204ENST00000423567 OAS2P29728 719 aaKnown RBP10.55□□□□□ -0.72
USP49-204ENST00000423567 PEBP1P30086 187 aaKnown RBP10.55□□□□□ -0.72
USP49-204ENST00000423567 PLTPP55058 493 aa10.55□□□□□ -0.72
USP49-204ENST00000423567 ILF2Q12905 390 aaKnown RBP10.55□□□□□ -0.72
USP49-204ENST00000423567 ARHGAP19Q14CB8 494 aa10.55□□□□□ -0.72
USP49-204ENST00000423567 NAA25Q14CX7 972 aa10.55□□□□□ -0.72
USP49-204ENST00000423567 TEDDM1Q5T9Z0 273 aa10.55□□□□□ -0.72
USP49-204ENST00000423567 KIAA1614Q5VZ46 1190 aa10.55□□□□□ -0.72
USP49-204ENST00000423567 DUPD1Q68J44 220 aa10.55□□□□□ -0.72
USP49-204ENST00000423567 TRMT10BQ6PF06 316 aaKnown RBP10.55□□□□□ -0.72
USP49-204ENST00000423567 CDHR3Q6ZTQ4 885 aa10.55□□□□□ -0.72
USP49-204ENST00000423567 CPNE9Q8IYJ1 553 aa10.55□□□□□ -0.72
USP49-204ENST00000423567 MYO1HQ8N1T3 1032 aa10.55□□□□□ -0.72
USP49-204ENST00000423567 LINC01555Q8NAE3 123 aa10.55□□□□□ -0.72
USP49-204ENST00000423567 LSM14AQ8ND56 463 aaKnown RBP10.55□□□□□ -0.72
USP49-204ENST00000423567 MNS1Q8NEH6 495 aa10.55□□□□□ -0.72
USP49-204ENST00000423567 OR1L3Q8NH93 324 aa10.55□□□□□ -0.72
USP49-204ENST00000423567 GIMAP7Q8NHV1 300 aa10.55□□□□□ -0.72
USP49-204ENST00000423567 HMGCLL1Q8TB92 370 aa10.55□□□□□ -0.72
USP49-204ENST00000423567 CD200R1Q8TD46 325 aa10.55□□□□□ -0.72
USP49-204ENST00000423567 CDKL2Q92772 493 aa10.55□□□□□ -0.72
USP49-204ENST00000423567 MR1Q95460 341 aa10.55□□□□□ -0.72
USP49-204ENST00000423567 CLIP3Q96DZ5 547 aa10.55□□□□□ -0.72
USP49-204ENST00000423567 SLC45A3Q96JT2 553 aa10.55□□□□□ -0.72
USP49-204ENST00000423567 NDNQ99608 321 aa10.55□□□□□ -0.72
USP49-204ENST00000423567 ARHGAP9Q9BRR9 750 aa10.55□□□□□ -0.72
USP49-204ENST00000423567 MENTQ9BUN1 341 aa10.55□□□□□ -0.72
USP49-204ENST00000423567 ACTR5Q9H9F9 607 aaPredicted RBP10.55□□□□□ -0.72
USP49-204ENST00000423567 SAYSD1Q9NPB0 183 aa10.55□□□□□ -0.72
USP49-204ENST00000423567 TXNDC16Q9P2K2 825 aa10.55□□□□□ -0.72
USP49-204ENST00000423567 CROTQ9UKG9 612 aa10.55□□□□□ -0.72
USP49-204ENST00000423567 FAM208BQ5VWN6 2430 aa10.54□□□□□ -0.72
USP49-204ENST00000423567 ARHGEF33A8MVX0 844 aa10.54□□□□□ -0.72
USP49-204ENST00000423567 C21orf140B9A014 251 aa10.54□□□□□ -0.72
USP49-204ENST00000423567 MYO1CO00159 1063 aa10.54□□□□□ -0.72
USP49-204ENST00000423567 ATXN7O15265 892 aaPredicted RBP10.54□□□□□ -0.72
USP49-204ENST00000423567 KATNA1O75449 491 aa10.54□□□□□ -0.72
USP49-204ENST00000423567 OR2B3O76000 313 aa10.54□□□□□ -0.72
USP49-204ENST00000423567 TCN2P20062 427 aa10.54□□□□□ -0.72
USP49-204ENST00000423567 MAGP20916 626 aa10.54□□□□□ -0.72
USP49-204ENST00000423567 RPA3P35244 121 aaPredicted RBP10.54□□□□□ -0.72
USP49-204ENST00000423567 RPS15P62841 145 aaKnown RBP10.54□□□□□ -0.72
USP49-204ENST00000423567 TSTA3Q13630 321 aaPredicted RBP10.54□□□□□ -0.72
USP49-204ENST00000423567 FASTKD3Q14CZ7 662 aaKnown RBP10.54□□□□□ -0.72
USP49-204ENST00000423567 CYP2A13Q16696 494 aa10.54□□□□□ -0.72
USP49-204ENST00000423567 CCSMST1Q4G0I0 132 aa10.54□□□□□ -0.72
USP49-204ENST00000423567 ZC3H12BQ5HYM0 836 aaKnown RBP10.54□□□□□ -0.72
USP49-204ENST00000423567 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.54□□□□□ -0.72
USP49-204ENST00000423567 HECTD2Q5U5R9 776 aa10.54□□□□□ -0.72
USP49-204ENST00000423567 FAM45BPQ6NSW5 357 aa10.54□□□□□ -0.72
USP49-204ENST00000423567 CAPN12Q6ZSI9 719 aa10.54□□□□□ -0.72
USP49-204ENST00000423567 UBE2R2Q712K3 238 aaPredicted RBP10.54□□□□□ -0.72
USP49-204ENST00000423567 PIWIL4Q7Z3Z4 852 aaKnown RBP10.54□□□□□ -0.72
USP49-204ENST00000423567 SLC26A11Q86WA9 606 aa10.54□□□□□ -0.72
USP49-204ENST00000423567 FBXO15Q8NCQ5 510 aaPredicted RBP10.54□□□□□ -0.72
USP49-204ENST00000423567 FLVCR1-AS1Q8TAF5 88 aa10.54□□□□□ -0.72
USP49-204ENST00000423567 FAM45AQ8TCE6 357 aa10.54□□□□□ -0.72
USP49-204ENST00000423567 MCOLN3Q8TDD5 553 aa10.54□□□□□ -0.72
USP49-204ENST00000423567 SMPDL3AQ92484 453 aa10.54□□□□□ -0.72
USP49-204ENST00000423567 STARD8Q92502 1023 aa10.54□□□□□ -0.72
USP49-204ENST00000423567 ZUFSPQ96AP4 578 aa10.54□□□□□ -0.72
USP49-204ENST00000423567 WBP1Q96G27 269 aa10.54□□□□□ -0.72
USP49-204ENST00000423567 LRFN5Q96NI6 719 aa10.54□□□□□ -0.72
USP49-204ENST00000423567 CATSPER2Q96P56 530 aa10.54□□□□□ -0.72
USP49-204ENST00000423567 SLC30A3Q99726 388 aa10.54□□□□□ -0.72
USP49-204ENST00000423567 WDR83Q9BRX9 315 aaKnown RBP10.54□□□□□ -0.72
USP49-204ENST00000423567 PHACTR1Q9C0D0 580 aa10.54□□□□□ -0.72
USP49-204ENST00000423567 SLC17A6Q9P2U8 582 aa10.54□□□□□ -0.72
USP49-204ENST00000423567 PTPRQQ9UMZ3 2332 aa10.54□□□□□ -0.72
USP49-204ENST00000423567 PLCL2Q9UPR0 1127 aa10.54□□□□□ -0.72
USP49-204ENST00000423567 MED16Q9Y2X0 877 aa10.54□□□□□ -0.72
USP49-204ENST00000423567 VWA7Q9Y334 891 aa10.54□□□□□ -0.72
USP49-204ENST00000423567 AP1M2Q9Y6Q5 423 aa10.54□□□□□ -0.72
USP49-204ENST00000423567 CELSR3Q9NYQ7 3312 aa10.54□□□□□ -0.72
USP49-204ENST00000423567 CTAGE15A4D2H0 777 aa10.53□□□□□ -0.72
USP49-204ENST00000423567 TP73O15350 636 aa10.53□□□□□ -0.72
USP49-204ENST00000423567 ZNF749O43361 778 aa10.53□□□□□ -0.72
USP49-204ENST00000423567 CCNDBP1O95273 360 aa10.53□□□□□ -0.72
USP49-204ENST00000423567 C8GP07360 202 aa10.53□□□□□ -0.72
USP49-204ENST00000423567 HIST1H2AGP0C0S8 130 aaPredicted RBP10.53□□□□□ -0.72
USP49-204ENST00000423567 CTAGE8P0CG41 777 aa10.53□□□□□ -0.72
USP49-204ENST00000423567 WT1P19544 449 aaPredicted RBP10.53□□□□□ -0.72
USP49-204ENST00000423567 HIST1H2ADP20671 130 aa10.53□□□□□ -0.72
USP49-204ENST00000423567 AGXTP21549 392 aa10.53□□□□□ -0.72
USP49-204ENST00000423567 GABRB3P28472 473 aa10.53□□□□□ -0.72
USP49-204ENST00000423567 CMPK1P30085 196 aa10.53□□□□□ -0.72
USP49-204ENST00000423567 PNLIPRP1P54315 467 aa10.53□□□□□ -0.72
USP49-204ENST00000423567 IL2P60568 153 aa10.53□□□□□ -0.72
USP49-204ENST00000423567 CBLBQ13191 982 aa10.53□□□□□ -0.72
USP49-204ENST00000423567 SP140Q13342 867 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms