RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 NIPSNAP2O75323 286 aa14.61□□□□□ -0.07
USB1-202ENST00000423271 HBQ1P09105 142 aa14.61□□□□□ -0.07
USB1-202ENST00000423271 FMO4P31512 558 aa14.61□□□□□ -0.07
USB1-202ENST00000423271 FOXL2P58012 376 aa14.61□□□□□ -0.07
USB1-202ENST00000423271 SARNPP82979 210 aaKnown RBP14.61□□□□□ -0.07
USB1-202ENST00000423271 SLC9A5Q14940 896 aa14.61□□□□□ -0.07
USB1-202ENST00000423271 IGFBP7Q16270 282 aa14.61□□□□□ -0.07
USB1-202ENST00000423271 KIAA0930Q6ICG6 404 aaPredicted RBP14.61□□□□□ -0.07
USB1-202ENST00000423271 MRNIPQ6NTE8 343 aa14.61□□□□□ -0.07
USB1-202ENST00000423271 RHBDD2Q6NTF9 364 aa14.61□□□□□ -0.07
USB1-202ENST00000423271 OTOAQ7RTW8 1153 aa14.61□□□□□ -0.07
USB1-202ENST00000423271 ZBTB2Q8N680 514 aa14.61□□□□□ -0.07
USB1-202ENST00000423271 OR2L8Q8NGY9 312 aa14.61□□□□□ -0.07
USB1-202ENST00000423271 KIF18AQ8NI77 898 aa14.61□□□□□ -0.07
USB1-202ENST00000423271 SKA2Q8WVK7 121 aaPredicted RBP14.61□□□□□ -0.07
USB1-202ENST00000423271 GBP5Q96PP8 586 aa14.61□□□□□ -0.07
USB1-202ENST00000423271 DPH2Q9BQC3 489 aaPredicted RBP14.61□□□□□ -0.07
USB1-202ENST00000423271 ING2Q9H160 280 aa14.61□□□□□ -0.07
USB1-202ENST00000423271 IRAK4Q9NWZ3 460 aa14.61□□□□□ -0.07
USB1-202ENST00000423271 PLCL2Q9UPR0 1127 aa14.61□□□□□ -0.07
USB1-202ENST00000423271 COL12A1Q99715 3063 aa14.61□□□□□ -0.07
USB1-202ENST00000423271 RAD51CO43502 376 aa14.6□□□□□ -0.07
USB1-202ENST00000423271 C1orf105O95561 183 aa14.6□□□□□ -0.07
USB1-202ENST00000423271 S1PR4O95977 384 aa14.6□□□□□ -0.07
USB1-202ENST00000423271 AGXTP21549 392 aa14.6□□□□□ -0.07
USB1-202ENST00000423271 PSMB5P28074 263 aa14.6□□□□□ -0.07
USB1-202ENST00000423271 CCL11P51671 97 aa14.6□□□□□ -0.07
USB1-202ENST00000423271 FOXK1P85037 733 aa14.6□□□□□ -0.07
USB1-202ENST00000423271 ATP1A4Q13733 1029 aa14.6□□□□□ -0.07
USB1-202ENST00000423271 FCRL6Q6DN72 434 aa14.6□□□□□ -0.07
USB1-202ENST00000423271 CASC4Q6P4E1 433 aa14.6□□□□□ -0.07
USB1-202ENST00000423271 CNSTQ6PJW8 725 aa14.6□□□□□ -0.07
USB1-202ENST00000423271 SDCCAG8Q86SQ7 713 aaPredicted RBP14.6□□□□□ -0.07
USB1-202ENST00000423271 SPNS2Q8IVW8 549 aa14.6□□□□□ -0.07
USB1-202ENST00000423271 TMEM151BQ8IW70 566 aa14.6□□□□□ -0.07
USB1-202ENST00000423271 TEX19Q8NA77 164 aa14.6□□□□□ -0.07
USB1-202ENST00000423271 GSDMBQ8TAX9 411 aa14.6□□□□□ -0.07
USB1-202ENST00000423271 DENND1AQ8TEH3 1009 aa14.6□□□□□ -0.07
USB1-202ENST00000423271 SERPINB12Q96P63 405 aa14.6□□□□□ -0.07
USB1-202ENST00000423271 TRIM31Q9BZY9 425 aa14.6□□□□□ -0.07
USB1-202ENST00000423271 XAB2Q9HCS7 855 aaKnown RBP14.6□□□□□ -0.07
USB1-202ENST00000423271 ACSS2Q9NR19 701 aa14.6□□□□□ -0.07
USB1-202ENST00000423271 EURLQ9NYK6 297 aa14.6□□□□□ -0.07
USB1-202ENST00000423271 GALPQ9UBC7 116 aa14.6□□□□□ -0.07
USB1-202ENST00000423271 SLC39A10Q9ULF5 831 aa14.6□□□□□ -0.07
USB1-202ENST00000423271 CRYL1Q9Y2S2 319 aa14.6□□□□□ -0.07
USB1-202ENST00000423271 AP1M2Q9Y6Q5 423 aa14.6□□□□□ -0.07
USB1-202ENST00000423271 EFCAB8A8MWE9 144 aa14.59□□□□□ -0.07
USB1-202ENST00000423271 KPNA5O15131 536 aa14.59□□□□□ -0.07
USB1-202ENST00000423271 PRICKLE3O43900 615 aaPredicted RBP14.59□□□□□ -0.07
USB1-202ENST00000423271 CNOT3O75175 753 aaKnown RBP14.59□□□□□ -0.07
USB1-202ENST00000423271 KLF7O75840 302 aaPredicted RBP14.59□□□□□ -0.07
USB1-202ENST00000423271 MLNP12872 115 aa14.59□□□□□ -0.07
USB1-202ENST00000423271 OGNP20774 298 aaKnown RBP14.59□□□□□ -0.07
USB1-202ENST00000423271 GRIA3P42263 894 aa14.59□□□□□ -0.07
USB1-202ENST00000423271 GCGRP47871 477 aa14.59□□□□□ -0.07
USB1-202ENST00000423271 GBX1Q14549 363 aa14.59□□□□□ -0.07
USB1-202ENST00000423271 RNF187Q5TA31 235 aaPredicted RBP14.59□□□□□ -0.07
USB1-202ENST00000423271 MLIPQ5VWP3 458 aa14.59□□□□□ -0.07
USB1-202ENST00000423271 TLDC1Q6P9B6 456 aa14.59□□□□□ -0.07
USB1-202ENST00000423271 CENPUQ71F23 418 aa14.59□□□□□ -0.07
USB1-202ENST00000423271 MAATS1Q7Z4T9 603 aa14.59□□□□□ -0.07
USB1-202ENST00000423271 PCGF5Q86SE9 256 aa14.59□□□□□ -0.07
USB1-202ENST00000423271 AGGF1Q8N302 714 aaeCLIP14.59□□□□□ -0.07
USB1-202ENST00000423271 PROKR1Q8TCW9 393 aa14.59□□□□□ -0.07
USB1-202ENST00000423271 RAD51AP1Q96B01 352 aa14.59□□□□□ -0.07
USB1-202ENST00000423271 ZNF669Q96BR6 464 aaPredicted RBP14.59□□□□□ -0.07
USB1-202ENST00000423271 SLC25A23Q9BV35 468 aa14.59□□□□□ -0.07
USB1-202ENST00000423271 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.59□□□□□ -0.07
USB1-202ENST00000423271 SRPK3Q9UPE1 567 aa14.59□□□□□ -0.07
USB1-202ENST00000423271 LRRK2Q5S007 2527 aa14.59□□□□□ -0.07
USB1-202ENST00000423271 DOPEY2Q9Y3R5 2298 aa14.58□□□□□ -0.08
USB1-202ENST00000423271 ANKRD12Q6UB98 2062 aa14.58□□□□□ -0.08
USB1-202ENST00000423271 FAM187AA6NFU0 413 aa14.58□□□□□ -0.08
USB1-202ENST00000423271 NRP2O60462 931 aa14.58□□□□□ -0.08
USB1-202ENST00000423271 SEC31AO94979 1220 aaKnown RBP14.58□□□□□ -0.08
USB1-202ENST00000423271 ESR1P03372 595 aa14.58□□□□□ -0.08
USB1-202ENST00000423271 ITGAXP20702 1163 aa14.58□□□□□ -0.08
USB1-202ENST00000423271 MCM3P25205 808 aa14.58□□□□□ -0.08
USB1-202ENST00000423271 OTX2P32243 289 aa14.58□□□□□ -0.08
USB1-202ENST00000423271 MAGEA3P43357 314 aa14.58□□□□□ -0.08
USB1-202ENST00000423271 RPL21P46778 160 aaKnown RBP14.58□□□□□ -0.08
USB1-202ENST00000423271 PGDP52209 483 aa14.58□□□□□ -0.08
USB1-202ENST00000423271 ITGA8P53708 1063 aa14.58□□□□□ -0.08
USB1-202ENST00000423271 MLLT10P55197 1068 aa14.58□□□□□ -0.08
USB1-202ENST00000423271 DCDP81605 110 aaKnown RBP14.58□□□□□ -0.08
USB1-202ENST00000423271 SF1Q15637 639 aaKnown RBP14.58□□□□□ -0.08
USB1-202ENST00000423271 ANKRD20A4Q4UJ75 823 aa14.58□□□□□ -0.08
USB1-202ENST00000423271 ACSBG2Q5FVE4 666 aa14.58□□□□□ -0.08
USB1-202ENST00000423271 ZNF470Q6ECI4 717 aa14.58□□□□□ -0.08
USB1-202ENST00000423271 NEPROQ6NW34 567 aa14.58□□□□□ -0.08
USB1-202ENST00000423271 TTC23LQ6PF05 361 aa14.58□□□□□ -0.08
USB1-202ENST00000423271 FIGLAQ6QHK4 219 aa14.58□□□□□ -0.08
USB1-202ENST00000423271 CILP2Q8IUL8 1156 aa14.58□□□□□ -0.08
USB1-202ENST00000423271 MCATQ8IVS2 390 aaKnown RBP14.58□□□□□ -0.08
USB1-202ENST00000423271 SLC22A18Q96BI1 424 aa14.58□□□□□ -0.08
USB1-202ENST00000423271 SNF8Q96H20 258 aa14.58□□□□□ -0.08
USB1-202ENST00000423271 TCF12Q99081 682 aa14.58□□□□□ -0.08
USB1-202ENST00000423271 SLC30A3Q99726 388 aa14.58□□□□□ -0.08
USB1-202ENST00000423271 DHRS4Q9BTZ2 278 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms