RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 RNASEH2BQ5TBB1 312 aaKnown RBP3.36□□□□□ -1.87
LINC00397-201ENST00000422074 MFSD4BQ5TF39 518 aa3.36□□□□□ -1.87
LINC00397-201ENST00000422074 KRTAP5-4Q6L8H1 288 aa3.36□□□□□ -1.87
LINC00397-201ENST00000422074 PTAR1Q7Z6K3 402 aaPredicted RBP3.36□□□□□ -1.87
LINC00397-201ENST00000422074 P2RY8Q86VZ1 359 aa3.36□□□□□ -1.87
LINC00397-201ENST00000422074 EID3Q8N140 333 aa3.36□□□□□ -1.87
LINC00397-201ENST00000422074 CCDC89Q8N998 374 aa3.36□□□□□ -1.87
LINC00397-201ENST00000422074 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.36□□□□□ -1.87
LINC00397-201ENST00000422074 OR10S1Q8NGN2 331 aa3.36□□□□□ -1.87
LINC00397-201ENST00000422074 ZNF300Q96RE9 604 aaPredicted RBP3.36□□□□□ -1.87
LINC00397-201ENST00000422074 PIGQQ9BRB3 760 aa3.36□□□□□ -1.87
LINC00397-201ENST00000422074 TEX12Q9BXU0 123 aa3.36□□□□□ -1.87
LINC00397-201ENST00000422074 WNT5BQ9H1J7 359 aa3.36□□□□□ -1.87
LINC00397-201ENST00000422074 CCDC177Q9NQR7 707 aaPredicted RBP3.36□□□□□ -1.87
LINC00397-201ENST00000422074 MAN2C1Q9NTJ4 1040 aa3.36□□□□□ -1.87
LINC00397-201ENST00000422074 P4HTMQ9NXG6 502 aa3.36□□□□□ -1.87
LINC00397-201ENST00000422074 OR6C2Q9NZP2 312 aa3.36□□□□□ -1.87
LINC00397-201ENST00000422074 C2orf81A6NN90 581 aa3.35□□□□□ -1.87
LINC00397-201ENST00000422074 STARD3NLO95772 234 aa3.35□□□□□ -1.87
LINC00397-201ENST00000422074 PORP16435 677 aaPredicted RBP3.35□□□□□ -1.87
LINC00397-201ENST00000422074 GJA1P17302 382 aa3.35□□□□□ -1.87
LINC00397-201ENST00000422074 OPRL1P41146 370 aa3.35□□□□□ -1.87
LINC00397-201ENST00000422074 CYCSP99999 105 aaKnown RBP3.35□□□□□ -1.87
LINC00397-201ENST00000422074 TAF10Q12962 218 aa3.35□□□□□ -1.87
LINC00397-201ENST00000422074 RIGQ13278 110 aa3.35□□□□□ -1.87
LINC00397-201ENST00000422074 ENPP2Q13822 863 aa3.35□□□□□ -1.87
LINC00397-201ENST00000422074 LY6DQ14210 128 aa3.35□□□□□ -1.87
LINC00397-201ENST00000422074 HERC3Q15034 1050 aa3.35□□□□□ -1.87
LINC00397-201ENST00000422074 TOMM20Q15388 145 aa3.35□□□□□ -1.87
LINC00397-201ENST00000422074 ODF4Q2M2E3 257 aa3.35□□□□□ -1.87
LINC00397-201ENST00000422074 TAF1BQ53T94 588 aaPredicted RBP3.35□□□□□ -1.87
LINC00397-201ENST00000422074 SYT14P1Q58G82 188 aa3.35□□□□□ -1.87
LINC00397-201ENST00000422074 FAM198BQ6UWH4 519 aa3.35□□□□□ -1.87
LINC00397-201ENST00000422074 SH2D6Q7Z4S9 175 aa3.35□□□□□ -1.87
LINC00397-201ENST00000422074 TMEM173Q86WV6 379 aaPredicted RBP3.35□□□□□ -1.87
LINC00397-201ENST00000422074 CFAP206Q8IYR0 622 aa3.35□□□□□ -1.87
LINC00397-201ENST00000422074 OR11H4Q8NGC9 324 aa3.35□□□□□ -1.87
LINC00397-201ENST00000422074 OR1L3Q8NH93 324 aa3.35□□□□□ -1.87
LINC00397-201ENST00000422074 SSMEM1Q8WWF3 244 aa3.35□□□□□ -1.87
LINC00397-201ENST00000422074 ZNF622Q969S3 477 aaKnown RBP eCLIP3.35□□□□□ -1.87
LINC00397-201ENST00000422074 RSRC1Q96IZ7 334 aaKnown RBP3.35□□□□□ -1.87
LINC00397-201ENST00000422074 MIS12Q9H081 205 aa3.35□□□□□ -1.87
LINC00397-201ENST00000422074 THAP2Q9H0W7 228 aa3.35□□□□□ -1.87
LINC00397-201ENST00000422074 TRPV4Q9HBA0 871 aa3.35□□□□□ -1.87
LINC00397-201ENST00000422074 Q9N2K0 584 aa3.35□□□□□ -1.87
LINC00397-201ENST00000422074 EQTNQ9NQ60 294 aa3.35□□□□□ -1.87
LINC00397-201ENST00000422074 GIMAP4Q9NUV9 329 aa3.35□□□□□ -1.87
LINC00397-201ENST00000422074 RPS6KA6Q9UK32 745 aa3.35□□□□□ -1.87
LINC00397-201ENST00000422074 PCDHGB4Q9UN71 923 aa3.35□□□□□ -1.87
LINC00397-201ENST00000422074 PPP1R3CQ9UQK1 317 aa3.35□□□□□ -1.87
LINC00397-201ENST00000422074 PTRH2Q9Y3E5 179 aaKnown RBP3.35□□□□□ -1.87
LINC00397-201ENST00000422074 IGHV3OR16-10A0A075B7F0 116 aa3.34□□□□□ -1.87
LINC00397-201ENST00000422074 ENO4A6NNW6 628 aa3.34□□□□□ -1.87
LINC00397-201ENST00000422074 ZNF195O14628 629 aa3.34□□□□□ -1.87
LINC00397-201ENST00000422074 FIBPO43427 364 aa3.34□□□□□ -1.87
LINC00397-201ENST00000422074 GP1BBP13224 206 aa3.34□□□□□ -1.87
LINC00397-201ENST00000422074 LMAN1P49257 510 aa3.34□□□□□ -1.87
LINC00397-201ENST00000422074 STK4Q13043 487 aa3.34□□□□□ -1.87
LINC00397-201ENST00000422074 CA9Q16790 459 aa3.34□□□□□ -1.87
LINC00397-201ENST00000422074 ZNF343Q6P1L6 599 aa3.34□□□□□ -1.87
LINC00397-201ENST00000422074 PAQR6Q6TCH4 344 aa3.34□□□□□ -1.87
LINC00397-201ENST00000422074 TMEM207Q6UWW9 146 aa3.34□□□□□ -1.87
LINC00397-201ENST00000422074 BRINP3Q76B58 766 aa3.34□□□□□ -1.87
LINC00397-201ENST00000422074 BTN2A1Q7KYR7 527 aa3.34□□□□□ -1.87
LINC00397-201ENST00000422074 RTN4RL2Q86UN3 420 aa3.34□□□□□ -1.87
LINC00397-201ENST00000422074 SMAP2Q8WU79 429 aaPredicted RBP3.34□□□□□ -1.87
LINC00397-201ENST00000422074 GATAD1Q8WUU5 269 aa3.34□□□□□ -1.87
LINC00397-201ENST00000422074 LPGAT1Q92604 370 aa3.34□□□□□ -1.87
LINC00397-201ENST00000422074 ARHGAP45Q92619 1136 aa3.34□□□□□ -1.87
LINC00397-201ENST00000422074 SLC22A18Q96BI1 424 aa3.34□□□□□ -1.87
LINC00397-201ENST00000422074 SPACA9Q96E40 222 aaPredicted RBP3.34□□□□□ -1.87
LINC00397-201ENST00000422074 OMA1Q96E52 524 aa3.34□□□□□ -1.87
LINC00397-201ENST00000422074 GPATCH1Q9BRR8 931 aaKnown RBP3.34□□□□□ -1.87
LINC00397-201ENST00000422074 LRRC61Q9BV99 259 aa3.34□□□□□ -1.87
LINC00397-201ENST00000422074 MRPL1Q9BYD6 325 aaKnown RBP3.34□□□□□ -1.87
LINC00397-201ENST00000422074 UPF3AQ9H1J1 476 aaKnown RBP3.34□□□□□ -1.87
LINC00397-201ENST00000422074 GKN1Q9NS71 199 aa3.34□□□□□ -1.87
LINC00397-201ENST00000422074 ANGPTL3Q9Y5C1 460 aa3.34□□□□□ -1.87
LINC00397-201ENST00000422074 A8MV72 311 aaPredicted RBP3.33□□□□□ -1.88
LINC00397-201ENST00000422074 O00370 1275 aa3.33□□□□□ -1.88
LINC00397-201ENST00000422074 ENTPD3O75355 529 aa3.33□□□□□ -1.88
LINC00397-201ENST00000422074 BEST1O76090 585 aa3.33□□□□□ -1.88
LINC00397-201ENST00000422074 SEC24AO95486 1093 aa3.33□□□□□ -1.88
LINC00397-201ENST00000422074 MMP12P39900 470 aa3.33□□□□□ -1.88
LINC00397-201ENST00000422074 EIF2DP41214 584 aaKnown RBP3.33□□□□□ -1.88
LINC00397-201ENST00000422074 MNDAP41218 407 aa3.33□□□□□ -1.88
LINC00397-201ENST00000422074 MATR3P43243 847 aaKnown RBP eCLIP3.33□□□□□ -1.88
LINC00397-201ENST00000422074 CSRP3P50461 194 aa3.33□□□□□ -1.88
LINC00397-201ENST00000422074 CSNK2BP67870 215 aa3.33□□□□□ -1.88
LINC00397-201ENST00000422074 NUCB1Q02818 461 aa3.33□□□□□ -1.88
LINC00397-201ENST00000422074 ZNF415Q09FC8 603 aa3.33□□□□□ -1.88
LINC00397-201ENST00000422074 CALCOCO2Q13137 446 aa3.33□□□□□ -1.88
LINC00397-201ENST00000422074 RAPSNQ13702 412 aa3.33□□□□□ -1.88
LINC00397-201ENST00000422074 SQLEQ14534 574 aa3.33□□□□□ -1.88
LINC00397-201ENST00000422074 FASTKD3Q14CZ7 662 aaKnown RBP3.33□□□□□ -1.88
LINC00397-201ENST00000422074 NTRK2Q16620 822 aa3.33□□□□□ -1.88
LINC00397-201ENST00000422074 UGT3A2Q3SY77 523 aa3.33□□□□□ -1.88
LINC00397-201ENST00000422074 IGSF11Q5DX21 431 aa3.33□□□□□ -1.88
LINC00397-201ENST00000422074 LYSMD4Q5XG99 296 aa3.33□□□□□ -1.88
LINC00397-201ENST00000422074 G2E3Q7L622 706 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms