RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 CDKL4Q5MAI5 379 aa16.97■□□□□ 0.31
LINC00271-201ENST00000421378 IRGCQ6NXR0 463 aa16.97■□□□□ 0.31
LINC00271-201ENST00000421378 C16orf46Q6P387 395 aa16.97■□□□□ 0.31
LINC00271-201ENST00000421378 SLCO6A1Q86UG4 719 aa16.97■□□□□ 0.31
LINC00271-201ENST00000421378 PLXDC1Q8IUK5 500 aa16.97■□□□□ 0.31
LINC00271-201ENST00000421378 TCAIMQ8N3R3 496 aa16.97■□□□□ 0.31
LINC00271-201ENST00000421378 SMPDL3AQ92484 453 aa16.97■□□□□ 0.31
LINC00271-201ENST00000421378 SLC22A18Q96BI1 424 aa16.97■□□□□ 0.31
LINC00271-201ENST00000421378 RHBDF1Q96CC6 855 aa16.97■□□□□ 0.31
LINC00271-201ENST00000421378 NUDT22Q9BRQ3 303 aa16.97■□□□□ 0.31
LINC00271-201ENST00000421378 RAB33BQ9H082 229 aa16.97■□□□□ 0.31
LINC00271-201ENST00000421378 ATG10Q9H0Y0 220 aa16.97■□□□□ 0.31
LINC00271-201ENST00000421378 ATXN7L1Q9ULK2 861 aaPredicted RBP16.97■□□□□ 0.31
LINC00271-201ENST00000421378 DCDC2BA2VCK2 349 aa16.96■□□□□ 0.31
LINC00271-201ENST00000421378 CAPN5O15484 640 aaPredicted RBP16.96■□□□□ 0.31
LINC00271-201ENST00000421378 SPAG7O75391 227 aa16.96■□□□□ 0.31
LINC00271-201ENST00000421378 DKK1O94907 266 aa16.96■□□□□ 0.31
LINC00271-201ENST00000421378 GFAPP14136 432 aa16.96■□□□□ 0.31
LINC00271-201ENST00000421378 GFERP55789 205 aa16.96■□□□□ 0.31
LINC00271-201ENST00000421378 PPP1CAP62136 330 aa16.96■□□□□ 0.31
LINC00271-201ENST00000421378 TBPL1P62380 186 aa16.96■□□□□ 0.31
LINC00271-201ENST00000421378 CFHR1Q03591 330 aa16.96■□□□□ 0.31
LINC00271-201ENST00000421378 TSTA3Q13630 321 aaPredicted RBP16.96■□□□□ 0.31
LINC00271-201ENST00000421378 KIR2DS3Q14952 304 aa16.96■□□□□ 0.31
LINC00271-201ENST00000421378 CCDC153Q494R4 210 aa16.96■□□□□ 0.31
LINC00271-201ENST00000421378 SULT1C3Q6IMI6 304 aa16.96■□□□□ 0.31
LINC00271-201ENST00000421378 SUSD1Q6UWL2 747 aa16.96■□□□□ 0.31
LINC00271-201ENST00000421378 DHRS13Q6UX07 377 aa16.96■□□□□ 0.31
LINC00271-201ENST00000421378 TMEM151AQ8N4L1 468 aa16.96■□□□□ 0.31
LINC00271-201ENST00000421378 MED8Q96G25 268 aa16.96■□□□□ 0.31
LINC00271-201ENST00000421378 ZDHHC12Q96GR4 267 aa16.96■□□□□ 0.31
LINC00271-201ENST00000421378 SH3GL2Q99962 352 aa16.96■□□□□ 0.31
LINC00271-201ENST00000421378 DPYSL5Q9BPU6 564 aa16.96■□□□□ 0.31
LINC00271-201ENST00000421378 TWSG1Q9GZX9 223 aa16.96■□□□□ 0.31
LINC00271-201ENST00000421378 CCDC177Q9NQR7 707 aaPredicted RBP16.96■□□□□ 0.31
LINC00271-201ENST00000421378 SPHK1Q9NYA1 384 aa16.96■□□□□ 0.31
LINC00271-201ENST00000421378 ACTR10Q9NZ32 417 aa16.96■□□□□ 0.31
LINC00271-201ENST00000421378 WWOXQ9NZC7 414 aa16.96■□□□□ 0.31
LINC00271-201ENST00000421378 EPHA6Q9UF33 1036 aa16.96■□□□□ 0.31
LINC00271-201ENST00000421378 MN1Q10571 1320 aaPredicted RBP16.96■□□□□ 0.31
LINC00271-201ENST00000421378 UNC13CQ8NB66 2214 aa16.96■□□□□ 0.3
LINC00271-201ENST00000421378 ISM1B1AKI9 464 aa16.95■□□□□ 0.3
LINC00271-201ENST00000421378 KCNA4P22459 653 aa16.95■□□□□ 0.3
LINC00271-201ENST00000421378 CCND1P24385 295 aa16.95■□□□□ 0.3
LINC00271-201ENST00000421378 PEBP1P30086 187 aaKnown RBP16.95■□□□□ 0.3
LINC00271-201ENST00000421378 INSM1Q01101 510 aaPredicted RBP16.95■□□□□ 0.3
LINC00271-201ENST00000421378 NAE1Q13564 534 aa16.95■□□□□ 0.3
LINC00271-201ENST00000421378 ZXDCQ2QGD7 858 aaPredicted RBP16.95■□□□□ 0.3
LINC00271-201ENST00000421378 AGBL2Q5U5Z8 902 aa16.95■□□□□ 0.3
LINC00271-201ENST00000421378 LRRC56Q8IYG6 542 aaPredicted RBP16.95■□□□□ 0.3
LINC00271-201ENST00000421378 OR4D9Q8NGE8 314 aa16.95■□□□□ 0.3
LINC00271-201ENST00000421378 TGM7Q96PF1 710 aa16.95■□□□□ 0.3
LINC00271-201ENST00000421378 CNOT10Q9H9A5 744 aaKnown RBP16.95■□□□□ 0.3
LINC00271-201ENST00000421378 SSU72Q9NP77 194 aaKnown RBP16.95■□□□□ 0.3
LINC00271-201ENST00000421378 POMT2Q9UKY4 750 aa16.95■□□□□ 0.3
LINC00271-201ENST00000421378 EMCNQ9ULC0 261 aa16.95■□□□□ 0.3
LINC00271-201ENST00000421378 PLLPQ9Y342 182 aa16.95■□□□□ 0.3
LINC00271-201ENST00000421378 CNOT1A5YKK6 2376 aaKnown RBP16.94■□□□□ 0.3
LINC00271-201ENST00000421378 A0A1W2PPV9 198 aa16.94■□□□□ 0.3
LINC00271-201ENST00000421378 TARM1B6A8C7 271 aa16.94■□□□□ 0.3
LINC00271-201ENST00000421378 TYROBPO43914 113 aa16.94■□□□□ 0.3
LINC00271-201ENST00000421378 KLK8O60259 260 aa16.94■□□□□ 0.3
LINC00271-201ENST00000421378 PLIN3O60664 434 aa16.94■□□□□ 0.3
LINC00271-201ENST00000421378 SMIM24O75264 130 aa16.94■□□□□ 0.3
LINC00271-201ENST00000421378 C9P02748 559 aa16.94■□□□□ 0.3
LINC00271-201ENST00000421378 SBK3P0C264 359 aa16.94■□□□□ 0.3
LINC00271-201ENST00000421378 HOXB3P14651 431 aaPredicted RBP16.94■□□□□ 0.3
LINC00271-201ENST00000421378 UGT2B7P16662 529 aa16.94■□□□□ 0.3
LINC00271-201ENST00000421378 RPA3P35244 121 aaPredicted RBP16.94■□□□□ 0.3
LINC00271-201ENST00000421378 ALDH18A1P54886 795 aaKnown RBP16.94■□□□□ 0.3
LINC00271-201ENST00000421378 MAGOHP61326 146 aaKnown RBP16.94■□□□□ 0.3
LINC00271-201ENST00000421378 PFKFB4Q16877 469 aa16.94■□□□□ 0.3
LINC00271-201ENST00000421378 PTCHD3Q3KNS1 767 aa16.94■□□□□ 0.3
LINC00271-201ENST00000421378 THEMIS2Q5TEJ8 643 aa16.94■□□□□ 0.3
LINC00271-201ENST00000421378 CAPN13Q6MZZ7 669 aaPredicted RBP16.94■□□□□ 0.3
LINC00271-201ENST00000421378 TMEM71Q6P5X7 295 aa16.94■□□□□ 0.3
LINC00271-201ENST00000421378 SPESP1Q6UW49 350 aa16.94■□□□□ 0.3
LINC00271-201ENST00000421378 RBM44Q6ZP01 1051 aaKnown RBP16.94■□□□□ 0.3
LINC00271-201ENST00000421378 TMPRSS9Q7Z410 1059 aa16.94■□□□□ 0.3
LINC00271-201ENST00000421378 FBXO39Q8N4B4 442 aa16.94■□□□□ 0.3
LINC00271-201ENST00000421378 CCDC63Q8NA47 563 aa16.94■□□□□ 0.3
LINC00271-201ENST00000421378 OR56A3Q8NH54 315 aa16.94■□□□□ 0.3
LINC00271-201ENST00000421378 TCP10LQ8TDR4 215 aa16.94■□□□□ 0.3
LINC00271-201ENST00000421378 ARL8AQ96BM9 186 aa16.94■□□□□ 0.3
LINC00271-201ENST00000421378 PYCR2Q96C36 320 aa16.94■□□□□ 0.3
LINC00271-201ENST00000421378 TLCD1Q96CP7 247 aa16.94■□□□□ 0.3
LINC00271-201ENST00000421378 CD180Q99467 661 aa16.94■□□□□ 0.3
LINC00271-201ENST00000421378 ABCF3Q9NUQ8 709 aa16.94■□□□□ 0.3
LINC00271-201ENST00000421378 TMEM9Q9P0T7 183 aa16.94■□□□□ 0.3
LINC00271-201ENST00000421378 KLHL3Q9UH77 587 aa16.94■□□□□ 0.3
LINC00271-201ENST00000421378 PTBP2Q9UKA9 531 aaKnown RBP16.94■□□□□ 0.3
LINC00271-201ENST00000421378 TMCO1Q9UM00 188 aa16.94■□□□□ 0.3
LINC00271-201ENST00000421378 PCDHB11Q9Y5F2 797 aa16.94■□□□□ 0.3
LINC00271-201ENST00000421378 IPO13O94829 963 aaKnown RBP16.94■□□□□ 0.3
LINC00271-201ENST00000421378 PROCP04070 461 aa16.94■□□□□ 0.3
LINC00271-201ENST00000421378 TAC1P20366 129 aa16.94■□□□□ 0.3
LINC00271-201ENST00000421378 MPSTP25325 297 aa16.94■□□□□ 0.3
LINC00271-201ENST00000421378 PSMB5P28074 263 aa16.94■□□□□ 0.3
LINC00271-201ENST00000421378 OAS2P29728 719 aaKnown RBP16.94■□□□□ 0.3
LINC00271-201ENST00000421378 PRDX3P30048 256 aaKnown RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms