RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 HMGCLP35914 325 aa8.55□□□□□ -1.04
TRIM39-206ENST00000420746 CD96P40200 585 aa8.55□□□□□ -1.04
TRIM39-206ENST00000420746 EMP2P54851 167 aa8.55□□□□□ -1.04
TRIM39-206ENST00000420746 EEF1A2Q05639 463 aaKnown RBP8.55□□□□□ -1.04
TRIM39-206ENST00000420746 RUNX1T1Q06455 604 aa8.55□□□□□ -1.04
TRIM39-206ENST00000420746 ITGA9Q13797 1035 aa8.55□□□□□ -1.04
TRIM39-206ENST00000420746 RNFT1Q5M7Z0 435 aa8.55□□□□□ -1.04
TRIM39-206ENST00000420746 FNBP1LQ5T0N5 605 aa8.55□□□□□ -1.04
TRIM39-206ENST00000420746 GPRC6AQ5T6X5 926 aa8.55□□□□□ -1.04
TRIM39-206ENST00000420746 SLC25A25Q6KCM7 469 aa8.55□□□□□ -1.04
TRIM39-206ENST00000420746 ARHGAP11AQ6P4F7 1023 aa8.55□□□□□ -1.04
TRIM39-206ENST00000420746 POLNQ7Z5Q5 900 aa8.55□□□□□ -1.04
TRIM39-206ENST00000420746 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.55□□□□□ -1.04
TRIM39-206ENST00000420746 MCATQ8IVS2 390 aaKnown RBP8.55□□□□□ -1.04
TRIM39-206ENST00000420746 FMR1NBQ8N0W7 255 aaPredicted RBP8.55□□□□□ -1.04
TRIM39-206ENST00000420746 RPRMLQ8N4K4 120 aa8.55□□□□□ -1.04
TRIM39-206ENST00000420746 HM13Q8TCT9 377 aa8.55□□□□□ -1.04
TRIM39-206ENST00000420746 ZNF592Q92610 1267 aa8.55□□□□□ -1.04
TRIM39-206ENST00000420746 TRIB3Q96RU7 358 aa8.55□□□□□ -1.04
TRIM39-206ENST00000420746 THAP2Q9H0W7 228 aa8.55□□□□□ -1.04
TRIM39-206ENST00000420746 GDPD2Q9HCC8 539 aa8.55□□□□□ -1.04
TRIM39-206ENST00000420746 ZNF304Q9HCX3 659 aa8.55□□□□□ -1.04
TRIM39-206ENST00000420746 C14orf105Q9NVL8 296 aa8.55□□□□□ -1.04
TRIM39-206ENST00000420746 OR6C2Q9NZP2 312 aa8.55□□□□□ -1.04
TRIM39-206ENST00000420746 PCSK1NQ9UHG2 260 aa8.55□□□□□ -1.04
TRIM39-206ENST00000420746 TTLL3Q9Y4R7 772 aa8.55□□□□□ -1.04
TRIM39-206ENST00000420746 FAM47E-STBD1D6RA91 191 aa8.54□□□□□ -1.04
TRIM39-206ENST00000420746 SYT5O00445 386 aa8.54□□□□□ -1.04
TRIM39-206ENST00000420746 IFRD1O00458 451 aaPredicted RBP8.54□□□□□ -1.04
TRIM39-206ENST00000420746 PHF1O43189 567 aaPredicted RBP8.54□□□□□ -1.04
TRIM39-206ENST00000420746 NEURL1O76050 574 aa8.54□□□□□ -1.04
TRIM39-206ENST00000420746 RNF8O76064 485 aa8.54□□□□□ -1.04
TRIM39-206ENST00000420746 SLC4A1P02730 911 aa8.54□□□□□ -1.04
TRIM39-206ENST00000420746 HLA-DQB2P05538 268 aa8.54□□□□□ -1.04
TRIM39-206ENST00000420746 CHRM5P08912 532 aaPredicted RBP8.54□□□□□ -1.04
TRIM39-206ENST00000420746 TFEBP19484 476 aa8.54□□□□□ -1.04
TRIM39-206ENST00000420746 MSH3P20585 1137 aa8.54□□□□□ -1.04
TRIM39-206ENST00000420746 AMPD1P23109 780 aa8.54□□□□□ -1.04
TRIM39-206ENST00000420746 PSMA2P25787 234 aa8.54□□□□□ -1.04
TRIM39-206ENST00000420746 MIPP30301 263 aa8.54□□□□□ -1.04
TRIM39-206ENST00000420746 ARSEP51690 589 aa8.54□□□□□ -1.04
TRIM39-206ENST00000420746 GALNT2Q10471 571 aa8.54□□□□□ -1.04
TRIM39-206ENST00000420746 BOP1Q14137 746 aaKnown RBP8.54□□□□□ -1.04
TRIM39-206ENST00000420746 BECN1Q14457 450 aa8.54□□□□□ -1.04
TRIM39-206ENST00000420746 MEP1AQ16819 746 aa8.54□□□□□ -1.04
TRIM39-206ENST00000420746 CLEC16AQ2KHT3 1053 aa8.54□□□□□ -1.04
TRIM39-206ENST00000420746 ZC3H12BQ5HYM0 836 aaKnown RBP8.54□□□□□ -1.04
TRIM39-206ENST00000420746 FBXW10Q5XX13 1052 aa8.54□□□□□ -1.04
TRIM39-206ENST00000420746 PLAG1Q6DJT9 500 aa8.54□□□□□ -1.04
TRIM39-206ENST00000420746 SPINK14Q6IE38 97 aa8.54□□□□□ -1.04
TRIM39-206ENST00000420746 TMEM205Q6UW68 189 aa8.54□□□□□ -1.04
TRIM39-206ENST00000420746 TMTC1Q8IUR5 882 aa8.54□□□□□ -1.04
TRIM39-206ENST00000420746 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.54□□□□□ -1.04
TRIM39-206ENST00000420746 TSGA13Q96PP4 275 aa8.54□□□□□ -1.04
TRIM39-206ENST00000420746 CSPG4P5Q96PW8 444 aa8.54□□□□□ -1.04
TRIM39-206ENST00000420746 OR52A5Q9H2C5 316 aa8.54□□□□□ -1.04
TRIM39-206ENST00000420746 XKR8Q9H6D3 395 aa8.54□□□□□ -1.04
TRIM39-206ENST00000420746 IL26Q9NPH9 171 aa8.54□□□□□ -1.04
TRIM39-206ENST00000420746 B4GALT7Q9UBV7 327 aa8.54□□□□□ -1.04
TRIM39-206ENST00000420746 MAN1B1Q9UKM7 699 aa8.54□□□□□ -1.04
TRIM39-206ENST00000420746 ICKQ9UPZ9 632 aa8.54□□□□□ -1.04
TRIM39-206ENST00000420746 MAU2Q9Y6X3 613 aa8.54□□□□□ -1.04
TRIM39-206ENST00000420746 CLDN4O14493 209 aa8.53□□□□□ -1.04
TRIM39-206ENST00000420746 TFECO14948 347 aaPredicted RBP8.53□□□□□ -1.04
TRIM39-206ENST00000420746 NME2P1O60361 137 aa8.53□□□□□ -1.04
TRIM39-206ENST00000420746 PRMT3O60678 531 aa8.53□□□□□ -1.04
TRIM39-206ENST00000420746 SMPD2O60906 423 aa8.53□□□□□ -1.04
TRIM39-206ENST00000420746 POLBP06746 335 aa8.53□□□□□ -1.04
TRIM39-206ENST00000420746 CYC1P08574 325 aa8.53□□□□□ -1.04
TRIM39-206ENST00000420746 PIRTP0C851 137 aa8.53□□□□□ -1.04
TRIM39-206ENST00000420746 NME2P22392 152 aa8.53□□□□□ -1.04
TRIM39-206ENST00000420746 CCNCP24863 283 aa8.53□□□□□ -1.04
TRIM39-206ENST00000420746 RPA4Q13156 261 aa8.53□□□□□ -1.04
TRIM39-206ENST00000420746 PDAP1Q13442 181 aaKnown RBP8.53□□□□□ -1.04
TRIM39-206ENST00000420746 KIR2DS3Q14952 304 aa8.53□□□□□ -1.04
TRIM39-206ENST00000420746 SLC14A2Q15849 920 aa8.53□□□□□ -1.04
TRIM39-206ENST00000420746 EMC4Q5J8M3 183 aa8.53□□□□□ -1.04
TRIM39-206ENST00000420746 HEPHL1Q6MZM0 1159 aa8.53□□□□□ -1.04
TRIM39-206ENST00000420746 UNC5DQ6UXZ4 953 aa8.53□□□□□ -1.04
TRIM39-206ENST00000420746 UNC5AQ6ZN44 842 aa8.53□□□□□ -1.04
TRIM39-206ENST00000420746 YTHDF3Q7Z739 585 aaKnown RBP8.53□□□□□ -1.04
TRIM39-206ENST00000420746 LAPTM4BQ86VI4 370 aa8.53□□□□□ -1.04
TRIM39-206ENST00000420746 ELOA2Q8IYF1 753 aaPredicted RBP8.53□□□□□ -1.04
TRIM39-206ENST00000420746 PRSS58Q8IYP2 241 aa8.53□□□□□ -1.04
TRIM39-206ENST00000420746 CFAP206Q8IYR0 622 aa8.53□□□□□ -1.04
TRIM39-206ENST00000420746 LGI4Q8N135 537 aa8.53□□□□□ -1.04
TRIM39-206ENST00000420746 OR5M3Q8NGP4 307 aa8.53□□□□□ -1.04
TRIM39-206ENST00000420746 ZNF653Q96CK0 615 aa8.53□□□□□ -1.04
TRIM39-206ENST00000420746 LRRC46Q96FV0 321 aa8.53□□□□□ -1.04
TRIM39-206ENST00000420746 PCDHB18PQ96TA0 734 aa8.53□□□□□ -1.04
TRIM39-206ENST00000420746 NRTNQ99748 197 aa8.53□□□□□ -1.04
TRIM39-206ENST00000420746 TTYH2Q9BSA4 534 aa8.53□□□□□ -1.04
TRIM39-206ENST00000420746 HGH1Q9BTY7 390 aa8.53□□□□□ -1.04
TRIM39-206ENST00000420746 TGIF2Q9GZN2 237 aa8.53□□□□□ -1.04
TRIM39-206ENST00000420746 CLSTN2Q9H4D0 955 aa8.53□□□□□ -1.04
TRIM39-206ENST00000420746 TRABDQ9H4I3 376 aa8.53□□□□□ -1.04
TRIM39-206ENST00000420746 SPHK1Q9NYA1 384 aa8.53□□□□□ -1.04
TRIM39-206ENST00000420746 FOXD3Q9UJU5 478 aaPredicted RBP8.53□□□□□ -1.04
TRIM39-206ENST00000420746 PHF3Q92576 2039 aaKnown RBP8.53□□□□□ -1.04
TRIM39-206ENST00000420746 TRIM64A6NGJ6 449 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms