RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 JRKLQ9Y4A0 524 aa10.61□□□□□ -0.71
SSBP3-206ENST00000420121 KLK4Q9Y5K2 254 aa10.61□□□□□ -0.71
SSBP3-206ENST00000420121 AP1M2Q9Y6Q5 423 aa10.61□□□□□ -0.71
SSBP3-206ENST00000420121 FAM237BA0A1B0GVD1 139 aa10.6□□□□□ -0.71
SSBP3-206ENST00000420121 KPNA5O15131 536 aa10.6□□□□□ -0.71
SSBP3-206ENST00000420121 KDM1AO60341 852 aa10.6□□□□□ -0.71
SSBP3-206ENST00000420121 CTSVO60911 334 aa10.6□□□□□ -0.71
SSBP3-206ENST00000420121 MED26O95402 600 aa10.6□□□□□ -0.71
SSBP3-206ENST00000420121 ONECUT2O95948 504 aa10.6□□□□□ -0.71
SSBP3-206ENST00000420121 RPN2P04844 631 aa10.6□□□□□ -0.71
SSBP3-206ENST00000420121 ERGP11308 486 aa10.6□□□□□ -0.71
SSBP3-206ENST00000420121 MLNP12872 115 aa10.6□□□□□ -0.71
SSBP3-206ENST00000420121 FMO4P31512 558 aa10.6□□□□□ -0.71
SSBP3-206ENST00000420121 COILP38432 576 aaPredicted RBP10.6□□□□□ -0.71
SSBP3-206ENST00000420121 CD97P48960 835 aa10.6□□□□□ -0.71
SSBP3-206ENST00000420121 CCL11P51671 97 aa10.6□□□□□ -0.71
SSBP3-206ENST00000420121 SRSF1Q07955 248 aaKnown RBP eCLIP10.6□□□□□ -0.71
SSBP3-206ENST00000420121 FASTKQ14296 549 aaKnown RBP10.6□□□□□ -0.71
SSBP3-206ENST00000420121 SLC9A5Q14940 896 aa10.6□□□□□ -0.71
SSBP3-206ENST00000420121 ANKRD20A4Q4UJ75 823 aa10.6□□□□□ -0.71
SSBP3-206ENST00000420121 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.6□□□□□ -0.71
SSBP3-206ENST00000420121 MRNIPQ6NTE8 343 aa10.6□□□□□ -0.71
SSBP3-206ENST00000420121 ZNF549Q6P9A3 640 aa10.6□□□□□ -0.71
SSBP3-206ENST00000420121 TLDC1Q6P9B6 456 aa10.6□□□□□ -0.71
SSBP3-206ENST00000420121 CNSTQ6PJW8 725 aa10.6□□□□□ -0.71
SSBP3-206ENST00000420121 FIGLAQ6QHK4 219 aa10.6□□□□□ -0.71
SSBP3-206ENST00000420121 OTOAQ7RTW8 1153 aa10.6□□□□□ -0.71
SSBP3-206ENST00000420121 HOOK3Q86VS8 718 aa10.6□□□□□ -0.71
SSBP3-206ENST00000420121 CILP2Q8IUL8 1156 aa10.6□□□□□ -0.71
SSBP3-206ENST00000420121 MCATQ8IVS2 390 aaKnown RBP10.6□□□□□ -0.71
SSBP3-206ENST00000420121 MCUQ8NE86 351 aa10.6□□□□□ -0.71
SSBP3-206ENST00000420121 FDCSPQ8NFU4 85 aa10.6□□□□□ -0.71
SSBP3-206ENST00000420121 OR2A1Q8NGT9 310 aa10.6□□□□□ -0.71
SSBP3-206ENST00000420121 GIMAP7Q8NHV1 300 aa10.6□□□□□ -0.71
SSBP3-206ENST00000420121 PROKR1Q8TCW9 393 aa10.6□□□□□ -0.71
SSBP3-206ENST00000420121 MAGOHBQ96A72 148 aaKnown RBP10.6□□□□□ -0.71
SSBP3-206ENST00000420121 RAD51AP1Q96B01 352 aa10.6□□□□□ -0.71
SSBP3-206ENST00000420121 FAM136AQ96C01 138 aa10.6□□□□□ -0.71
SSBP3-206ENST00000420121 PBKQ96KB5 322 aa10.6□□□□□ -0.71
SSBP3-206ENST00000420121 SIGLEC10Q96LC7 697 aa10.6□□□□□ -0.71
SSBP3-206ENST00000420121 SERPINB12Q96P63 405 aa10.6□□□□□ -0.71
SSBP3-206ENST00000420121 TCF12Q99081 682 aa10.6□□□□□ -0.71
SSBP3-206ENST00000420121 DHRS4Q9BTZ2 278 aa10.6□□□□□ -0.71
SSBP3-206ENST00000420121 SLC25A23Q9BV35 468 aa10.6□□□□□ -0.71
SSBP3-206ENST00000420121 NUDT9Q9BW91 350 aa10.6□□□□□ -0.71
SSBP3-206ENST00000420121 SYNPO2LQ9H987 977 aa10.6□□□□□ -0.71
SSBP3-206ENST00000420121 ACSS2Q9NR19 701 aa10.6□□□□□ -0.71
SSBP3-206ENST00000420121 SRPK3Q9UPE1 567 aa10.6□□□□□ -0.71
SSBP3-206ENST00000420121 PLAAQ9Y263 795 aa10.6□□□□□ -0.71
SSBP3-206ENST00000420121 CRYL1Q9Y2S2 319 aa10.6□□□□□ -0.71
SSBP3-206ENST00000420121 MAST4O15021 2626 aa10.6□□□□□ -0.71
SSBP3-206ENST00000420121 USP9YO00507 2555 aaPredicted RBP10.6□□□□□ -0.71
SSBP3-206ENST00000420121 ARHGEF33A8MVX0 844 aa10.59□□□□□ -0.71
SSBP3-206ENST00000420121 C9J4A7 227 aa10.59□□□□□ -0.71
SSBP3-206ENST00000420121 SORBS2O94875 1100 aaKnown RBP10.59□□□□□ -0.71
SSBP3-206ENST00000420121 ESR1P03372 595 aa10.59□□□□□ -0.71
SSBP3-206ENST00000420121 UMODP07911 640 aa10.59□□□□□ -0.71
SSBP3-206ENST00000420121 PKMP14618 531 aaKnown RBP10.59□□□□□ -0.71
SSBP3-206ENST00000420121 AGXTP21549 392 aa10.59□□□□□ -0.71
SSBP3-206ENST00000420121 MCM3P25205 808 aa10.59□□□□□ -0.71
SSBP3-206ENST00000420121 ATP5DP30049 168 aa10.59□□□□□ -0.71
SSBP3-206ENST00000420121 GRIA3P42263 894 aa10.59□□□□□ -0.71
SSBP3-206ENST00000420121 CLCN7P51798 805 aa10.59□□□□□ -0.71
SSBP3-206ENST00000420121 MLLT10P55197 1068 aa10.59□□□□□ -0.71
SSBP3-206ENST00000420121 DCDP81605 110 aaKnown RBP10.59□□□□□ -0.71
SSBP3-206ENST00000420121 CYP2A13Q16696 494 aa10.59□□□□□ -0.71
SSBP3-206ENST00000420121 NADK2Q4G0N4 442 aa10.59□□□□□ -0.71
SSBP3-206ENST00000420121 NKAIN1Q4KMZ8 207 aa10.59□□□□□ -0.71
SSBP3-206ENST00000420121 ACSBG2Q5FVE4 666 aa10.59□□□□□ -0.71
SSBP3-206ENST00000420121 RNF187Q5TA31 235 aaPredicted RBP10.59□□□□□ -0.71
SSBP3-206ENST00000420121 MLIPQ5VWP3 458 aa10.59□□□□□ -0.71
SSBP3-206ENST00000420121 NEPROQ6NW34 567 aa10.59□□□□□ -0.71
SSBP3-206ENST00000420121 CCDC137Q6PK04 289 aaKnown RBP10.59□□□□□ -0.71
SSBP3-206ENST00000420121 COX15Q7KZN9 410 aa10.59□□□□□ -0.71
SSBP3-206ENST00000420121 MRGPREQ86SM8 312 aa10.59□□□□□ -0.71
SSBP3-206ENST00000420121 DENND6AQ8IWF6 608 aa10.59□□□□□ -0.71
SSBP3-206ENST00000420121 SLC35F6Q8N357 371 aa10.59□□□□□ -0.71
SSBP3-206ENST00000420121 DTWD1Q8N5C7 304 aa10.59□□□□□ -0.71
SSBP3-206ENST00000420121 OTUD6BQ8N6M0 293 aa10.59□□□□□ -0.71
SSBP3-206ENST00000420121 NAT8LQ8N9F0 302 aa10.59□□□□□ -0.71
SSBP3-206ENST00000420121 TEX19Q8NA77 164 aa10.59□□□□□ -0.71
SSBP3-206ENST00000420121 OR2Y1Q8NGV0 311 aa10.59□□□□□ -0.71
SSBP3-206ENST00000420121 N4BP2L2Q92802 583 aaPredicted RBP10.59□□□□□ -0.71
SSBP3-206ENST00000420121 SLC22A18Q96BI1 424 aa10.59□□□□□ -0.71
SSBP3-206ENST00000420121 OSBPL9Q96SU4 736 aa10.59□□□□□ -0.71
SSBP3-206ENST00000420121 RAB11FIP5Q9BXF6 653 aa10.59□□□□□ -0.71
SSBP3-206ENST00000420121 SLC7A5P2Q9GIP4 190 aa10.59□□□□□ -0.71
SSBP3-206ENST00000420121 KCNF1Q9H3M0 494 aa10.59□□□□□ -0.71
SSBP3-206ENST00000420121 SLC39A10Q9ULF5 831 aa10.59□□□□□ -0.71
SSBP3-206ENST00000420121 RP1L1Q8IWN7 2480 aaPredicted RBP10.59□□□□□ -0.71
SSBP3-206ENST00000420121 FITM1A5D6W6 292 aa10.58□□□□□ -0.72
SSBP3-206ENST00000420121 TARM1B6A8C7 271 aa10.58□□□□□ -0.72
SSBP3-206ENST00000420121 H3BMM5 538 aa10.58□□□□□ -0.72
SSBP3-206ENST00000420121 GOLGA8MH3BSY2 632 aa10.58□□□□□ -0.72
SSBP3-206ENST00000420121 MASP2O00187 686 aa10.58□□□□□ -0.72
SSBP3-206ENST00000420121 PGRMC1O00264 195 aaKnown RBP10.58□□□□□ -0.72
SSBP3-206ENST00000420121 ZNF185O15231 689 aa10.58□□□□□ -0.72
SSBP3-206ENST00000420121 PHF2O75151 1096 aa10.58□□□□□ -0.72
SSBP3-206ENST00000420121 PSIP1O75475 530 aaKnown RBP10.58□□□□□ -0.72
SSBP3-206ENST00000420121 FKBP9O95302 570 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms