RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 DNAJC11Q9NVH1 559 aa13.83□□□□□ -0.2
SHMT1P1-201ENST00000419974 INTS7Q9NVH2 962 aaKnown RBP13.83□□□□□ -0.2
SHMT1P1-201ENST00000419974 PNPOQ9NVS9 261 aa13.83□□□□□ -0.2
SHMT1P1-201ENST00000419974 OR6C2Q9NZP2 312 aa13.83□□□□□ -0.2
SHMT1P1-201ENST00000419974 TAAR2Q9P1P5 351 aa13.83□□□□□ -0.2
SHMT1P1-201ENST00000419974 FAM8A1Q9UBU6 413 aa13.83□□□□□ -0.2
SHMT1P1-201ENST00000419974 GMEB2Q9UKD1 530 aa13.83□□□□□ -0.2
SHMT1P1-201ENST00000419974 APOBEC2Q9Y235 224 aaKnown RBP13.83□□□□□ -0.2
SHMT1P1-201ENST00000419974 DMXL1Q9Y485 3027 aa13.83□□□□□ -0.2
SHMT1P1-201ENST00000419974 LMO7DNF2Z398 122 aa13.82□□□□□ -0.2
SHMT1P1-201ENST00000419974 GIPC1O14908 333 aa13.82□□□□□ -0.2
SHMT1P1-201ENST00000419974 HGSO14964 777 aaPredicted RBP13.82□□□□□ -0.2
SHMT1P1-201ENST00000419974 AZIN1O14977 448 aa13.82□□□□□ -0.2
SHMT1P1-201ENST00000419974 WDR47O94967 919 aa13.82□□□□□ -0.2
SHMT1P1-201ENST00000419974 NPPBP16860 134 aa13.82□□□□□ -0.2
SHMT1P1-201ENST00000419974 SDHBP21912 280 aa13.82□□□□□ -0.2
SHMT1P1-201ENST00000419974 AK4P27144 223 aaPredicted RBP13.82□□□□□ -0.2
SHMT1P1-201ENST00000419974 C21orf59P57076 290 aa13.82□□□□□ -0.2
SHMT1P1-201ENST00000419974 TRAF3Q13114 568 aa13.82□□□□□ -0.2
SHMT1P1-201ENST00000419974 SPDYAQ5MJ70 313 aa13.82□□□□□ -0.2
SHMT1P1-201ENST00000419974 SH2D4BQ5SQS7 431 aa13.82□□□□□ -0.2
SHMT1P1-201ENST00000419974 LCTLQ6UWM7 567 aa13.82□□□□□ -0.2
SHMT1P1-201ENST00000419974 MBOAT1Q6ZNC8 495 aa13.82□□□□□ -0.2
SHMT1P1-201ENST00000419974 GPRIN3Q6ZVF9 776 aa13.82□□□□□ -0.2
SHMT1P1-201ENST00000419974 ERMP1Q7Z2K6 904 aa13.82□□□□□ -0.2
SHMT1P1-201ENST00000419974 RD3Q7Z3Z2 195 aa13.82□□□□□ -0.2
SHMT1P1-201ENST00000419974 THOC6Q86W42 341 aaKnown RBP13.82□□□□□ -0.2
SHMT1P1-201ENST00000419974 CACNA2D3Q8IZS8 1091 aa13.82□□□□□ -0.2
SHMT1P1-201ENST00000419974 TEX9Q8N6V9 391 aa13.82□□□□□ -0.2
SHMT1P1-201ENST00000419974 OR2L8Q8NGY9 312 aa13.82□□□□□ -0.2
SHMT1P1-201ENST00000419974 CCL4L1Q8NHW4 92 aa13.82□□□□□ -0.2
SHMT1P1-201ENST00000419974 SMPDL3AQ92484 453 aa13.82□□□□□ -0.2
SHMT1P1-201ENST00000419974 MOCOSQ96EN8 888 aa13.82□□□□□ -0.2
SHMT1P1-201ENST00000419974 CAMK1GQ96NX5 476 aa13.82□□□□□ -0.2
SHMT1P1-201ENST00000419974 HAUS8Q9BT25 410 aa13.82□□□□□ -0.2
SHMT1P1-201ENST00000419974 CCDC28BQ9BUN5 200 aa13.82□□□□□ -0.2
SHMT1P1-201ENST00000419974 PITHD1Q9GZP4 211 aaPredicted RBP13.82□□□□□ -0.2
SHMT1P1-201ENST00000419974 MIR1-1HGQ9H1L0 117 aa13.82□□□□□ -0.2
SHMT1P1-201ENST00000419974 MEAF6Q9HAF1 191 aa13.82□□□□□ -0.2
SHMT1P1-201ENST00000419974 NPHS2Q9NP85 383 aa13.82□□□□□ -0.2
SHMT1P1-201ENST00000419974 MID1IP1Q9NPA3 183 aa13.82□□□□□ -0.2
SHMT1P1-201ENST00000419974 MRGBPQ9NV56 204 aa13.82□□□□□ -0.2
SHMT1P1-201ENST00000419974 SCHIP1Q9P0W5 487 aaPredicted RBP13.82□□□□□ -0.2
SHMT1P1-201ENST00000419974 ZNF624Q9P2J8 865 aaPredicted RBP13.82□□□□□ -0.2
SHMT1P1-201ENST00000419974 TSR3Q9UJK0 312 aaKnown RBP13.82□□□□□ -0.2
SHMT1P1-201ENST00000419974 PSMD13Q9UNM6 376 aa13.82□□□□□ -0.2
SHMT1P1-201ENST00000419974 SLC22A14Q9Y267 594 aa13.82□□□□□ -0.2
SHMT1P1-201ENST00000419974 TSC22D4Q9Y3Q8 395 aa13.82□□□□□ -0.2
SHMT1P1-201ENST00000419974 KCNE2Q9Y6J6 123 aa13.82□□□□□ -0.2
SHMT1P1-201ENST00000419974 NPIPB8E9PQR5 432 aa13.81□□□□□ -0.2
SHMT1P1-201ENST00000419974 PPP6CO00743 305 aa13.81□□□□□ -0.2
SHMT1P1-201ENST00000419974 YKT6O15498 198 aa13.81□□□□□ -0.2
SHMT1P1-201ENST00000419974 PRICKLE3O43900 615 aaPredicted RBP13.81□□□□□ -0.2
SHMT1P1-201ENST00000419974 FOXD2O60548 495 aaPredicted RBP13.81□□□□□ -0.2
SHMT1P1-201ENST00000419974 CCNT2O60583 730 aaKnown RBP13.81□□□□□ -0.2
SHMT1P1-201ENST00000419974 FKBP9O95302 570 aa13.81□□□□□ -0.2
SHMT1P1-201ENST00000419974 EML2O95834 649 aa13.81□□□□□ -0.2
SHMT1P1-201ENST00000419974 GNAZP19086 355 aa13.81□□□□□ -0.2
SHMT1P1-201ENST00000419974 MPSTP25325 297 aa13.81□□□□□ -0.2
SHMT1P1-201ENST00000419974 PKLRP30613 574 aa13.81□□□□□ -0.2
SHMT1P1-201ENST00000419974 SHMT2P34897 504 aa13.81□□□□□ -0.2
SHMT1P1-201ENST00000419974 SLC19A1P41440 591 aa13.81□□□□□ -0.2
SHMT1P1-201ENST00000419974 GDF5P43026 501 aa13.81□□□□□ -0.2
SHMT1P1-201ENST00000419974 CCR10P46092 362 aa13.81□□□□□ -0.2
SHMT1P1-201ENST00000419974 FASLGP48023 281 aa13.81□□□□□ -0.2
SHMT1P1-201ENST00000419974 CSNK1EP49674 416 aaKnown RBP13.81□□□□□ -0.2
SHMT1P1-201ENST00000419974 ARFIP2P53365 341 aa13.81□□□□□ -0.2
SHMT1P1-201ENST00000419974 ERVPABLB-1P60509 514 aa13.81□□□□□ -0.2
SHMT1P1-201ENST00000419974 NAE1Q13564 534 aa13.81□□□□□ -0.2
SHMT1P1-201ENST00000419974 ZNF423Q2M1K9 1284 aa13.81□□□□□ -0.2
SHMT1P1-201ENST00000419974 C18orf21Q32NC0 220 aaPredicted RBP13.81□□□□□ -0.2
SHMT1P1-201ENST00000419974 PRRT3Q5FWE3 981 aa13.81□□□□□ -0.2
SHMT1P1-201ENST00000419974 MAVSQ7Z434 540 aa13.81□□□□□ -0.2
SHMT1P1-201ENST00000419974 SYVN1Q86TM6 617 aa13.81□□□□□ -0.2
SHMT1P1-201ENST00000419974 OR52B6Q8NGF0 335 aa13.81□□□□□ -0.2
SHMT1P1-201ENST00000419974 ACTRT2Q8TDY3 377 aa13.81□□□□□ -0.2
SHMT1P1-201ENST00000419974 ESAMQ96AP7 390 aa13.81□□□□□ -0.2
SHMT1P1-201ENST00000419974 OR4K3Q96R72 315 aa13.81□□□□□ -0.2
SHMT1P1-201ENST00000419974 FERD3LQ96RJ6 166 aa13.81□□□□□ -0.2
SHMT1P1-201ENST00000419974 FAM107BQ9H098 131 aa13.81□□□□□ -0.2
SHMT1P1-201ENST00000419974 TCEAL2Q9H3H9 227 aaPredicted RBP13.81□□□□□ -0.2
SHMT1P1-201ENST00000419974 SEMA4BQ9NPR2 832 aaPredicted RBP13.81□□□□□ -0.2
SHMT1P1-201ENST00000419974 CCDC177Q9NQR7 707 aaPredicted RBP13.81□□□□□ -0.2
SHMT1P1-201ENST00000419974 ANGPTL3Q9Y5C1 460 aa13.81□□□□□ -0.2
SHMT1P1-201ENST00000419974 DNAJC15Q9Y5T4 150 aa13.81□□□□□ -0.2
SHMT1P1-201ENST00000419974 CEP250Q9BV73 2442 aa13.8□□□□□ -0.2
SHMT1P1-201ENST00000419974 OR52A4PA6NMU1 304 aa13.8□□□□□ -0.2
SHMT1P1-201ENST00000419974 AQP9O43315 295 aa13.8□□□□□ -0.2
SHMT1P1-201ENST00000419974 VPS4BO75351 444 aa13.8□□□□□ -0.2
SHMT1P1-201ENST00000419974 PIAS2O75928 621 aa13.8□□□□□ -0.2
SHMT1P1-201ENST00000419974 CLDN9O95484 217 aa13.8□□□□□ -0.2
SHMT1P1-201ENST00000419974 PCSK2P16519 638 aa13.8□□□□□ -0.2
SHMT1P1-201ENST00000419974 HRH2P25021 359 aa13.8□□□□□ -0.2
SHMT1P1-201ENST00000419974 HNF4AP41235 474 aa13.8□□□□□ -0.2
SHMT1P1-201ENST00000419974 CCNG1P51959 295 aa13.8□□□□□ -0.2
SHMT1P1-201ENST00000419974 AQP5P55064 265 aa13.8□□□□□ -0.2
SHMT1P1-201ENST00000419974 TBPL1P62380 186 aa13.8□□□□□ -0.2
SHMT1P1-201ENST00000419974 DUOXA1Q1HG43 343 aa13.8□□□□□ -0.2
SHMT1P1-201ENST00000419974 FAM91A1Q658Y4 838 aa13.8□□□□□ -0.2
SHMT1P1-201ENST00000419974 LETMD1Q6P1Q0 360 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms