RNA–Protein interactions for RNA: ENST00000419499.1

LINC00402-201, long intergenic non-protein coding RNA 402, humanhuman

TSL 2 BASIC

Gene LINC00402, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00402-201ENST00000419499 SNX6Q9UNH7 406 aa9.49□□□□□ -0.89
LINC00402-201ENST00000419499 PCDHGB5Q9Y5G0 923 aa9.49□□□□□ -0.89
LINC00402-201ENST00000419499 CROCCQ5TZA2 2017 aa9.49□□□□□ -0.89
LINC00402-201ENST00000419499 C17orf113A0A1B0GUU1 675 aa9.49□□□□□ -0.89
LINC00402-201ENST00000419499 DPPA5A6NC42 116 aa9.49□□□□□ -0.89
LINC00402-201ENST00000419499 SLC16A8O95907 504 aa9.49□□□□□ -0.89
LINC00402-201ENST00000419499 PGRP06401 933 aa9.49□□□□□ -0.89
LINC00402-201ENST00000419499 GPIP06744 558 aa9.49□□□□□ -0.89
LINC00402-201ENST00000419499 ERGP11308 486 aa9.49□□□□□ -0.89
LINC00402-201ENST00000419499 SLC2A4P14672 509 aa9.49□□□□□ -0.89
LINC00402-201ENST00000419499 BDKRB1P46663 353 aa9.49□□□□□ -0.89
LINC00402-201ENST00000419499 CCT8P50990 548 aa9.49□□□□□ -0.89
LINC00402-201ENST00000419499 CLCN2P51788 898 aa9.49□□□□□ -0.89
LINC00402-201ENST00000419499 CLDN8P56748 225 aa9.49□□□□□ -0.89
LINC00402-201ENST00000419499 OR4D2P58180 307 aa9.49□□□□□ -0.89
LINC00402-201ENST00000419499 CPSF6Q16630 551 aaKnown RBP eCLIP9.49□□□□□ -0.89
LINC00402-201ENST00000419499 SPANXN4Q5MJ08 99 aa9.49□□□□□ -0.89
LINC00402-201ENST00000419499 FRG2Q64ET8 278 aa9.49□□□□□ -0.89
LINC00402-201ENST00000419499 THOC6Q86W42 341 aaKnown RBP9.49□□□□□ -0.89
LINC00402-201ENST00000419499 CALHM3Q86XJ0 350 aa9.49□□□□□ -0.89
LINC00402-201ENST00000419499 CHERPQ8IWX8 916 aaKnown RBP9.49□□□□□ -0.89
LINC00402-201ENST00000419499 AADATQ8N5Z0 425 aa9.49□□□□□ -0.89
LINC00402-201ENST00000419499 ZNF548Q8NEK5 533 aaPredicted RBP9.49□□□□□ -0.89
LINC00402-201ENST00000419499 EZH1Q92800 747 aaPredicted RBP9.49□□□□□ -0.89
LINC00402-201ENST00000419499 PPP1R16AQ96I34 528 aa9.49□□□□□ -0.89
LINC00402-201ENST00000419499 ZNF583Q96ND8 569 aa9.49□□□□□ -0.89
LINC00402-201ENST00000419499 FRG2BQ96QU4 278 aa9.49□□□□□ -0.89
LINC00402-201ENST00000419499 PKP4Q99569 1192 aa9.49□□□□□ -0.89
LINC00402-201ENST00000419499 ATXN10Q9UBB4 475 aa9.49□□□□□ -0.89
LINC00402-201ENST00000419499 EGFL7Q9UHF1 273 aa9.49□□□□□ -0.89
LINC00402-201ENST00000419499 GPR34Q9UPC5 381 aa9.49□□□□□ -0.89
LINC00402-201ENST00000419499 EIF3LQ9Y262 564 aaKnown RBP9.49□□□□□ -0.89
LINC00402-201ENST00000419499 TNRC18O15417 2968 aaPredicted RBP9.49□□□□□ -0.89
LINC00402-201ENST00000419499 DHRS12A0PJE2 317 aa9.49□□□□□ -0.89
LINC00402-201ENST00000419499 C7orf72A4D263 438 aa9.49□□□□□ -0.89
LINC00402-201ENST00000419499 MAP3K13O43283 966 aa9.49□□□□□ -0.89
LINC00402-201ENST00000419499 HIST1H2AGP0C0S8 130 aaPredicted RBP9.49□□□□□ -0.89
LINC00402-201ENST00000419499 PCSK2P16519 638 aa9.49□□□□□ -0.89
LINC00402-201ENST00000419499 HIST1H2ADP20671 130 aa9.49□□□□□ -0.89
LINC00402-201ENST00000419499 ITPKAP23677 461 aa9.49□□□□□ -0.89
LINC00402-201ENST00000419499 TACR1P25103 407 aa9.49□□□□□ -0.89
LINC00402-201ENST00000419499 MAGEA10P43363 369 aaPredicted RBP9.49□□□□□ -0.89
LINC00402-201ENST00000419499 HYAL1Q12794 435 aa9.49□□□□□ -0.89
LINC00402-201ENST00000419499 RUNX3Q13761 415 aa9.49□□□□□ -0.89
LINC00402-201ENST00000419499 FAM174BQ3ZCQ3 159 aa9.49□□□□□ -0.89
LINC00402-201ENST00000419499 PYCR3Q53H96 274 aa9.49□□□□□ -0.89
LINC00402-201ENST00000419499 FOXB2Q5VYV0 432 aa9.49□□□□□ -0.89
LINC00402-201ENST00000419499 EGFLAMQ63HQ2 1017 aa9.49□□□□□ -0.89
LINC00402-201ENST00000419499 ANKRD54Q6NXT1 300 aa9.49□□□□□ -0.89
LINC00402-201ENST00000419499 AGTRAPQ6RW13 159 aa9.49□□□□□ -0.89
LINC00402-201ENST00000419499 SPPL2CQ8IUH8 684 aa9.49□□□□□ -0.89
LINC00402-201ENST00000419499 DTWD1Q8N5C7 304 aa9.49□□□□□ -0.89
LINC00402-201ENST00000419499 ICA1LQ8NDH6 482 aa9.49□□□□□ -0.89
LINC00402-201ENST00000419499 RAB7BQ96AH8 199 aa9.49□□□□□ -0.89
LINC00402-201ENST00000419499 ELSPBP1Q96BH3 223 aa9.49□□□□□ -0.89
LINC00402-201ENST00000419499 APIPQ96GX9 242 aa9.49□□□□□ -0.89
LINC00402-201ENST00000419499 METTL2AQ96IZ6 378 aaKnown RBP9.49□□□□□ -0.89
LINC00402-201ENST00000419499 HIST1H2AHQ96KK5 128 aa9.49□□□□□ -0.89
LINC00402-201ENST00000419499 HIST1H2AJQ99878 128 aa9.49□□□□□ -0.89
LINC00402-201ENST00000419499 H2AFJQ9BTM1 129 aa9.49□□□□□ -0.89
LINC00402-201ENST00000419499 SGPP1Q9BX95 441 aa9.49□□□□□ -0.89
LINC00402-201ENST00000419499 TRIM15Q9C019 465 aa9.49□□□□□ -0.89
LINC00402-201ENST00000419499 GPRC5BQ9NZH0 403 aa9.49□□□□□ -0.89
LINC00402-201ENST00000419499 INPP4BO15327 924 aa9.48□□□□□ -0.89
LINC00402-201ENST00000419499 PRSS23O95084 383 aa9.48□□□□□ -0.89
LINC00402-201ENST00000419499 SMIM18P0DKX4 95 aa9.48□□□□□ -0.89
LINC00402-201ENST00000419499 MTHFD1P11586 935 aaKnown RBP9.48□□□□□ -0.89
LINC00402-201ENST00000419499 GGT1P19440 569 aa9.48□□□□□ -0.89
LINC00402-201ENST00000419499 RAE1P78406 368 aaKnown RBP9.48□□□□□ -0.89
LINC00402-201ENST00000419499 GRAMD1BQ3KR37 738 aa9.48□□□□□ -0.89
LINC00402-201ENST00000419499 INTS11Q5TA45 600 aaKnown RBP9.48□□□□□ -0.89
LINC00402-201ENST00000419499 TMEM220Q6QAJ8 160 aa9.48□□□□□ -0.89
LINC00402-201ENST00000419499 MSANTD1Q6ZTZ1 278 aa9.48□□□□□ -0.89
LINC00402-201ENST00000419499 TRIM74Q86UV6 250 aa9.48□□□□□ -0.89
LINC00402-201ENST00000419499 CPA6Q8N4T0 437 aa9.48□□□□□ -0.89
LINC00402-201ENST00000419499 OXR1Q8N573 874 aa9.48□□□□□ -0.89
LINC00402-201ENST00000419499 TMEM159Q96B96 161 aa9.48□□□□□ -0.89
LINC00402-201ENST00000419499 MYADMQ96S97 322 aa9.48□□□□□ -0.89
LINC00402-201ENST00000419499 KCTD14Q9BQ13 255 aaPredicted RBP9.48□□□□□ -0.89
LINC00402-201ENST00000419499 MENTQ9BUN1 341 aa9.48□□□□□ -0.89
LINC00402-201ENST00000419499 RSPH9Q9H1X1 276 aaPredicted RBP9.48□□□□□ -0.89
LINC00402-201ENST00000419499 S1PR5Q9H228 398 aa9.48□□□□□ -0.89
LINC00402-201ENST00000419499 OR52A5Q9H2C5 316 aa9.48□□□□□ -0.89
LINC00402-201ENST00000419499 BRF2Q9HAW0 419 aa9.48□□□□□ -0.89
LINC00402-201ENST00000419499 ZFP14Q9HCL3 533 aa9.48□□□□□ -0.89
LINC00402-201ENST00000419499 SH2B3Q9UQQ2 575 aa9.48□□□□□ -0.89
LINC00402-201ENST00000419499 GMEB1Q9Y692 573 aa9.48□□□□□ -0.89
LINC00402-201ENST00000419499 PRR19A6NJB7 356 aa9.48□□□□□ -0.89
LINC00402-201ENST00000419499 ACOX3O15254 700 aa9.48□□□□□ -0.89
LINC00402-201ENST00000419499 DFNA5O60443 496 aa9.48□□□□□ -0.89
LINC00402-201ENST00000419499 SCN2BO60939 215 aa9.48□□□□□ -0.89
LINC00402-201ENST00000419499 PRPS2P11908 318 aa9.48□□□□□ -0.89
LINC00402-201ENST00000419499 ZNF8P17098 575 aaPredicted RBP9.48□□□□□ -0.89
LINC00402-201ENST00000419499 NEK2P51955 445 aa9.48□□□□□ -0.89
LINC00402-201ENST00000419499 TMEM154Q6P9G4 183 aa9.48□□□□□ -0.89
LINC00402-201ENST00000419499 C10orf111Q8N326 155 aa9.48□□□□□ -0.89
LINC00402-201ENST00000419499 PLA2G15Q8NCC3 412 aa9.48□□□□□ -0.89
LINC00402-201ENST00000419499 ST13P5Q8NFI4 369 aaPredicted RBP9.48□□□□□ -0.89
LINC00402-201ENST00000419499 OR2L2Q8NH16 312 aa9.48□□□□□ -0.89
LINC00402-201ENST00000419499 MRPL38Q96DV4 380 aaKnown RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms