RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 EIF2B3Q9NR50 452 aaKnown RBP20.92■□□□□ 0.94
ACTB-203ENST00000417101 TREX1Q9NSU2 369 aa20.92■□□□□ 0.94
ACTB-203ENST00000417101 GNPTGQ9UJJ9 305 aa20.92■□□□□ 0.94
ACTB-203ENST00000417101 TTC7AQ9ULT0 858 aaPredicted RBP20.92■□□□□ 0.94
ACTB-203ENST00000417101 SEMA7AO75326 666 aa20.91■□□□□ 0.94
ACTB-203ENST00000417101 NDUFS3O75489 264 aa20.91■□□□□ 0.94
ACTB-203ENST00000417101 MCM3P25205 808 aa20.91■□□□□ 0.94
ACTB-203ENST00000417101 VARSP26640 1264 aaKnown RBP20.91■□□□□ 0.94
ACTB-203ENST00000417101 NMBRP28336 390 aa20.91■□□□□ 0.94
ACTB-203ENST00000417101 BASP1P80723 227 aaKnown RBP20.91■□□□□ 0.94
ACTB-203ENST00000417101 MRPL49Q13405 166 aaKnown RBP20.91■□□□□ 0.94
ACTB-203ENST00000417101 EIF2S3LQ2VIR3 472 aaKnown RBP20.91■□□□□ 0.94
ACTB-203ENST00000417101 ZC3H12BQ5HYM0 836 aaKnown RBP20.91■□□□□ 0.94
ACTB-203ENST00000417101 C19orf60Q96EN9 201 aa20.91■□□□□ 0.94
ACTB-203ENST00000417101 PANX3Q96QZ0 392 aa20.91■□□□□ 0.94
ACTB-203ENST00000417101 IL22Q9GZX6 179 aa20.91■□□□□ 0.94
ACTB-203ENST00000417101 ZNF552Q9H707 407 aaPredicted RBP20.91■□□□□ 0.94
ACTB-203ENST00000417101 RUVBL2Q9Y230 463 aaKnown RBP20.91■□□□□ 0.94
ACTB-203ENST00000417101 B3GNT3Q9Y2A9 372 aa20.91■□□□□ 0.94
ACTB-203ENST00000417101 NFS1Q9Y697 457 aa20.91■□□□□ 0.94
ACTB-203ENST00000417101 KRT87PA6NCN2 255 aa20.9■□□□□ 0.94
ACTB-203ENST00000417101 KLHL41O60662 606 aa20.9■□□□□ 0.94
ACTB-203ENST00000417101 CCSMST1Q4G0I0 132 aa20.9■□□□□ 0.94
ACTB-203ENST00000417101 GSTA5Q7RTV2 222 aa20.9■□□□□ 0.94
ACTB-203ENST00000417101 OTOAQ7RTW8 1153 aa20.9■□□□□ 0.94
ACTB-203ENST00000417101 OVCH1Q7RTY7 1134 aa20.9■□□□□ 0.94
ACTB-203ENST00000417101 LRRC6Q86X45 466 aa20.9■□□□□ 0.94
ACTB-203ENST00000417101 IQCKQ8N0W5 287 aa20.9■□□□□ 0.94
ACTB-203ENST00000417101 MPP5Q8N3R9 675 aa20.9■□□□□ 0.94
ACTB-203ENST00000417101 OTUD6BQ8N6M0 293 aa20.9■□□□□ 0.94
ACTB-203ENST00000417101 DENND1AQ8TEH3 1009 aa20.9■□□□□ 0.94
ACTB-203ENST00000417101 SSC4DQ8WTU2 575 aa20.9■□□□□ 0.94
ACTB-203ENST00000417101 FKBP10Q96AY3 582 aa20.9■□□□□ 0.94
ACTB-203ENST00000417101 RAD51AP1Q96B01 352 aa20.9■□□□□ 0.94
ACTB-203ENST00000417101 SELENOSQ9BQE4 189 aa20.9■□□□□ 0.94
ACTB-203ENST00000417101 RAB11FIP5Q9BXF6 653 aa20.9■□□□□ 0.94
ACTB-203ENST00000417101 ATP13A2Q9NQ11 1180 aa20.9■□□□□ 0.94
ACTB-203ENST00000417101 CUTCQ9NTM9 273 aa20.9■□□□□ 0.94
ACTB-203ENST00000417101 BFARQ9NZS9 450 aa20.9■□□□□ 0.94
ACTB-203ENST00000417101 DRG1Q9Y295 367 aaKnown RBP20.9■□□□□ 0.94
ACTB-203ENST00000417101 TEX15Q9BXT5 2789 aa20.9■□□□□ 0.94
ACTB-203ENST00000417101 GOLGA6L6A8MZA4 724 aa20.89■□□□□ 0.93
ACTB-203ENST00000417101 AGPSO00116 658 aa20.89■□□□□ 0.93
ACTB-203ENST00000417101 DSCR3O14972 297 aa20.89■□□□□ 0.93
ACTB-203ENST00000417101 KPNA5O15131 536 aa20.89■□□□□ 0.93
ACTB-203ENST00000417101 PRICKLE3O43900 615 aaPredicted RBP20.89■□□□□ 0.93
ACTB-203ENST00000417101 C1orf105O95561 183 aa20.89■□□□□ 0.93
ACTB-203ENST00000417101 PIM1P11309 404 aaPredicted RBP20.89■□□□□ 0.93
ACTB-203ENST00000417101 BDKRB1P46663 353 aa20.89■□□□□ 0.93
ACTB-203ENST00000417101 NPY2RP49146 381 aa20.89■□□□□ 0.93
ACTB-203ENST00000417101 EIF3BP55884 814 aaKnown RBP20.89■□□□□ 0.93
ACTB-203ENST00000417101 GRM7Q14831 915 aa20.89■□□□□ 0.93
ACTB-203ENST00000417101 C4orf17Q53FE4 359 aa20.89■□□□□ 0.93
ACTB-203ENST00000417101 TCTE1Q5JU00 501 aa20.89■□□□□ 0.93
ACTB-203ENST00000417101 HIST2H2BCQ6DN03 193 aa20.89■□□□□ 0.93
ACTB-203ENST00000417101 DRICH1Q6PGQ1 229 aaPredicted RBP20.89■□□□□ 0.93
ACTB-203ENST00000417101 CES3Q6UWW8 571 aa20.89■□□□□ 0.93
ACTB-203ENST00000417101 C4orf22Q6V702 233 aa20.89■□□□□ 0.93
ACTB-203ENST00000417101 CISD2Q8N5K1 135 aaKnown RBP20.89■□□□□ 0.93
ACTB-203ENST00000417101 ZDHHC19Q8WVZ1 309 aaPredicted RBP20.89■□□□□ 0.93
ACTB-203ENST00000417101 SNRNP40Q96DI7 357 aaKnown RBP20.89■□□□□ 0.93
ACTB-203ENST00000417101 PLEKHB1Q9UF11 243 aaPredicted RBP20.89■□□□□ 0.93
ACTB-203ENST00000417101 CDC23Q9UJX2 597 aa20.89■□□□□ 0.93
ACTB-203ENST00000417101 FBXL4Q9UKA2 621 aa20.89■□□□□ 0.93
ACTB-203ENST00000417101 ANKRD12Q6UB98 2062 aa20.89■□□□□ 0.93
ACTB-203ENST00000417101 NOTCH2Q04721 2471 aa20.88■□□□□ 0.93
ACTB-203ENST00000417101 AP3B1O00203 1094 aa20.88■□□□□ 0.93
ACTB-203ENST00000417101 CTSVO60911 334 aa20.88■□□□□ 0.93
ACTB-203ENST00000417101 IPO13O94829 963 aaKnown RBP20.88■□□□□ 0.93
ACTB-203ENST00000417101 RPS3P23396 243 aaKnown RBP eCLIP20.88■□□□□ 0.932e-57■■□□□ 12.4
ACTB-203ENST00000417101 MMP11P24347 488 aa20.88■□□□□ 0.93
ACTB-203ENST00000417101 MGAT1P26572 445 aa20.88■□□□□ 0.93
ACTB-203ENST00000417101 PSMB5P28074 263 aa20.88■□□□□ 0.93
ACTB-203ENST00000417101 SOX8P57073 446 aa20.88■□□□□ 0.93
ACTB-203ENST00000417101 NKG7Q16617 165 aa20.88■□□□□ 0.93
ACTB-203ENST00000417101 KCTD19Q17RG1 926 aaPredicted RBP20.88■□□□□ 0.93
ACTB-203ENST00000417101 YOD1Q5VVQ6 348 aaPredicted RBP20.88■□□□□ 0.93
ACTB-203ENST00000417101 CNSTQ6PJW8 725 aa20.88■□□□□ 0.93
ACTB-203ENST00000417101 IGFL3Q6UXB1 125 aa20.88■□□□□ 0.93
ACTB-203ENST00000417101 COX15Q7KZN9 410 aa20.88■□□□□ 0.93
ACTB-203ENST00000417101 RAB42Q8N4Z0 105 aa20.88■□□□□ 0.93
ACTB-203ENST00000417101 METTL27Q8N6F8 245 aaPredicted RBP20.88■□□□□ 0.93
ACTB-203ENST00000417101 TTC29Q8NA56 475 aaPredicted RBP20.88■□□□□ 0.93
ACTB-203ENST00000417101 ZUFSPQ96AP4 578 aa20.88■□□□□ 0.93
ACTB-203ENST00000417101 ZNF285Q96NJ3 590 aa20.88■□□□□ 0.93
ACTB-203ENST00000417101 MIPEPQ99797 713 aa20.88■□□□□ 0.93
ACTB-203ENST00000417101 ILKAPQ9H0C8 392 aaPredicted RBP20.88■□□□□ 0.93
ACTB-203ENST00000417101 WDR54Q9H977 334 aa20.88■□□□□ 0.93
ACTB-203ENST00000417101 ZBTB20Q9HC78 741 aaPredicted RBP20.88■□□□□ 0.93
ACTB-203ENST00000417101 ASF1BQ9NVP2 202 aa20.88■□□□□ 0.93
ACTB-203ENST00000417101 TSR3Q9UJK0 312 aaKnown RBP20.88■□□□□ 0.93
ACTB-203ENST00000417101 HIVEP3Q5T1R4 2406 aa20.87■□□□□ 0.93
ACTB-203ENST00000417101 UNC79Q9P2D8 2635 aa20.87■□□□□ 0.93
ACTB-203ENST00000417101 TARM1B6A8C7 271 aa20.87■□□□□ 0.93
ACTB-203ENST00000417101 ALOX12BO75342 701 aa20.87■□□□□ 0.93
ACTB-203ENST00000417101 VAPBO95292 243 aa20.87■□□□□ 0.93
ACTB-203ENST00000417101 FKBP9O95302 570 aa20.87■□□□□ 0.93
ACTB-203ENST00000417101 ONECUT2O95948 504 aa20.87■□□□□ 0.93
ACTB-203ENST00000417101 FGGP02679 453 aa20.87■□□□□ 0.93
ACTB-203ENST00000417101 ALBP02768 609 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms