RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 CREBBPQ92793 2442 aa14.22□□□□□ -0.13
RPS28-201ENST00000417088 ANKUB1A6NFN9 424 aa14.21□□□□□ -0.13
RPS28-201ENST00000417088 LIASO43766 372 aa14.21□□□□□ -0.13
RPS28-201ENST00000417088 PRICKLE3O43900 615 aaPredicted RBP14.21□□□□□ -0.13
RPS28-201ENST00000417088 SLCO2B1O94956 709 aa14.21□□□□□ -0.13
RPS28-201ENST00000417088 CLDN1O95832 211 aa14.21□□□□□ -0.13
RPS28-201ENST00000417088 IFNB1P01574 187 aa14.21□□□□□ -0.13
RPS28-201ENST00000417088 ALBP02768 609 aa14.21□□□□□ -0.13
RPS28-201ENST00000417088 RPN2P04844 631 aa14.21□□□□□ -0.13
RPS28-201ENST00000417088 APOA4P06727 396 aa14.21□□□□□ -0.13
RPS28-201ENST00000417088 ITGA3P26006 1051 aa14.21□□□□□ -0.13
RPS28-201ENST00000417088 COL8A1P27658 744 aa14.21□□□□□ -0.13
RPS28-201ENST00000417088 AOAHP28039 575 aa14.21□□□□□ -0.13
RPS28-201ENST00000417088 PPARGP37231 505 aaPredicted RBP14.21□□□□□ -0.13
RPS28-201ENST00000417088 GRIA3P42263 894 aa14.21□□□□□ -0.13
RPS28-201ENST00000417088 GLRBP48167 497 aa14.21□□□□□ -0.13
RPS28-201ENST00000417088 PRAMEP78395 509 aa14.21□□□□□ -0.13
RPS28-201ENST00000417088 KIF5AQ12840 1032 aa14.21□□□□□ -0.13
RPS28-201ENST00000417088 NKG7Q16617 165 aa14.21□□□□□ -0.13
RPS28-201ENST00000417088 ZC3H12BQ5HYM0 836 aaKnown RBP14.21□□□□□ -0.13
RPS28-201ENST00000417088 PRUNE1Q86TP1 453 aa14.21□□□□□ -0.13
RPS28-201ENST00000417088 LDB1Q86U70 411 aaPredicted RBP14.21□□□□□ -0.13
RPS28-201ENST00000417088 TMEM139Q8IV31 216 aa14.21□□□□□ -0.13
RPS28-201ENST00000417088 DENND1AQ8TEH3 1009 aa14.21□□□□□ -0.13
RPS28-201ENST00000417088 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.21□□□□□ -0.13
RPS28-201ENST00000417088 ZNF285Q96NJ3 590 aa14.21□□□□□ -0.13
RPS28-201ENST00000417088 BAG1Q99933 345 aaPredicted RBP14.21□□□□□ -0.13
RPS28-201ENST00000417088 TSSK1BQ9BXA7 367 aa14.21□□□□□ -0.13
RPS28-201ENST00000417088 SLC26A1Q9H2B4 701 aa14.21□□□□□ -0.13
RPS28-201ENST00000417088 WDR54Q9H977 334 aa14.21□□□□□ -0.13
RPS28-201ENST00000417088 ENAMQ9NRM1 1142 aa14.21□□□□□ -0.13
RPS28-201ENST00000417088 RAB6BQ9NRW1 208 aa14.21□□□□□ -0.13
RPS28-201ENST00000417088 CUTCQ9NTM9 273 aa14.21□□□□□ -0.13
RPS28-201ENST00000417088 MARCH4Q9P2E8 410 aaPredicted RBP14.21□□□□□ -0.13
RPS28-201ENST00000417088 SLC5A6Q9Y289 635 aa14.21□□□□□ -0.13
RPS28-201ENST00000417088 TCAF1Q9Y4C2 921 aa14.21□□□□□ -0.13
RPS28-201ENST00000417088 CSAG2Q9Y5P2 127 aa14.21□□□□□ -0.13
RPS28-201ENST00000417088 HS3ST3B1Q9Y662 390 aa14.21□□□□□ -0.13
RPS28-201ENST00000417088 DOCK10Q96BY6 2186 aa14.2□□□□□ -0.14
RPS28-201ENST00000417088 E7EVH7 732 aa14.2□□□□□ -0.14
RPS28-201ENST00000417088 SOCS6O14544 535 aa14.2□□□□□ -0.14
RPS28-201ENST00000417088 RASGRF2O14827 1237 aa14.2□□□□□ -0.14
RPS28-201ENST00000417088 DSCR3O14972 297 aa14.2□□□□□ -0.14
RPS28-201ENST00000417088 ALOX12BO75342 701 aa14.2□□□□□ -0.14
RPS28-201ENST00000417088 PIM1P11309 404 aaPredicted RBP14.2□□□□□ -0.14
RPS28-201ENST00000417088 ETS1P14921 441 aa14.2□□□□□ -0.14
RPS28-201ENST00000417088 GRM7Q14831 915 aa14.2□□□□□ -0.14
RPS28-201ENST00000417088 SF1Q15637 639 aaKnown RBP14.2□□□□□ -0.14
RPS28-201ENST00000417088 HIF1AQ16665 826 aa14.2□□□□□ -0.14
RPS28-201ENST00000417088 PRAMEF13Q5VWM6 474 aa14.2□□□□□ -0.14
RPS28-201ENST00000417088 ZNF787Q6DD87 383 aa14.2□□□□□ -0.14
RPS28-201ENST00000417088 KIRREL2Q6UWL6 708 aa14.2□□□□□ -0.14
RPS28-201ENST00000417088 IGFL2Q6UWQ7 119 aa14.2□□□□□ -0.14
RPS28-201ENST00000417088 NLRP9Q7RTR0 991 aa14.2□□□□□ -0.14
RPS28-201ENST00000417088 PEX13Q92968 403 aa14.2□□□□□ -0.14
RPS28-201ENST00000417088 WDR77Q9BQA1 342 aaPredicted RBP14.2□□□□□ -0.14
RPS28-201ENST00000417088 DESI2Q9BSY9 194 aa14.2□□□□□ -0.14
RPS28-201ENST00000417088 INTS7Q9NVH2 962 aaKnown RBP14.2□□□□□ -0.14
RPS28-201ENST00000417088 CDC23Q9UJX2 597 aa14.2□□□□□ -0.14
RPS28-201ENST00000417088 SLC39A10Q9ULF5 831 aa14.2□□□□□ -0.14
RPS28-201ENST00000417088 CAPN6Q9Y6Q1 641 aa14.2□□□□□ -0.14
RPS28-201ENST00000417088 PCM1Q15154 2024 aa14.2□□□□□ -0.14
RPS28-201ENST00000417088 FITM1A5D6W6 292 aa14.19□□□□□ -0.14
RPS28-201ENST00000417088 PRMT5O14744 637 aaPredicted RBP14.19□□□□□ -0.14
RPS28-201ENST00000417088 CTSVO60911 334 aa14.19□□□□□ -0.14
RPS28-201ENST00000417088 ELOAQ14241 798 aaKnown RBP14.19□□□□□ -0.14
RPS28-201ENST00000417088 TMED2Q15363 201 aa14.19□□□□□ -0.14
RPS28-201ENST00000417088 AARS2Q5JTZ9 985 aaKnown RBP14.19□□□□□ -0.14
RPS28-201ENST00000417088 TCTE1Q5JU00 501 aa14.19□□□□□ -0.14
RPS28-201ENST00000417088 YOD1Q5VVQ6 348 aaPredicted RBP14.19□□□□□ -0.14
RPS28-201ENST00000417088 SHISA6Q6ZSJ9 500 aa14.19□□□□□ -0.14
RPS28-201ENST00000417088 PPP4R1Q8TF05 950 aa14.19□□□□□ -0.14
RPS28-201ENST00000417088 UBE2Q2Q8WVN8 375 aa14.19□□□□□ -0.14
RPS28-201ENST00000417088 C1orf54Q8WWF1 131 aa14.19□□□□□ -0.14
RPS28-201ENST00000417088 ZUFSPQ96AP4 578 aa14.19□□□□□ -0.14
RPS28-201ENST00000417088 C5orf34Q96MH7 638 aa14.19□□□□□ -0.14
RPS28-201ENST00000417088 FRMD8P1Q9BZ68 369 aaPredicted RBP14.19□□□□□ -0.14
RPS28-201ENST00000417088 P2RY12Q9H244 342 aa14.19□□□□□ -0.14
RPS28-201ENST00000417088 SOX17Q9H6I2 414 aaPredicted RBP14.19□□□□□ -0.14
RPS28-201ENST00000417088 MRM3Q9HC36 420 aaKnown RBP14.19□□□□□ -0.14
RPS28-201ENST00000417088 CHRAC1Q9NRG0 131 aa14.19□□□□□ -0.14
RPS28-201ENST00000417088 CATSPERZQ9NTU4 200 aa14.19□□□□□ -0.14
RPS28-201ENST00000417088 CTSFQ9UBX1 484 aa14.19□□□□□ -0.14
RPS28-201ENST00000417088 ANAPC5Q9UJX4 755 aa14.19□□□□□ -0.14
RPS28-201ENST00000417088 ZNF148Q9UQR1 794 aa14.19□□□□□ -0.14
RPS28-201ENST00000417088 NFS1Q9Y697 457 aa14.19□□□□□ -0.14
RPS28-201ENST00000417088 VSTM2BA6NLU5 285 aa14.18□□□□□ -0.14
RPS28-201ENST00000417088 TARM1B6A8C7 271 aa14.18□□□□□ -0.14
RPS28-201ENST00000417088 CD3EAPO15446 510 aaKnown RBP14.18□□□□□ -0.14
RPS28-201ENST00000417088 FKBP9O95302 570 aa14.18□□□□□ -0.14
RPS28-201ENST00000417088 APRTP07741 180 aa14.18□□□□□ -0.14
RPS28-201ENST00000417088 DCTP40126 519 aa14.18□□□□□ -0.14
RPS28-201ENST00000417088 OR1D4P47884 311 aa14.18□□□□□ -0.14
RPS28-201ENST00000417088 TTPAP49638 278 aa14.18□□□□□ -0.14
RPS28-201ENST00000417088 VSX2P58304 361 aaPredicted RBP14.18□□□□□ -0.14
RPS28-201ENST00000417088 SNX1Q13596 522 aa14.18□□□□□ -0.14
RPS28-201ENST00000417088 FAM214AQ32MH5 1076 aa14.18□□□□□ -0.14
RPS28-201ENST00000417088 CCSMST1Q4G0I0 132 aa14.18□□□□□ -0.14
RPS28-201ENST00000417088 PCID2Q5JVF3 399 aa14.18□□□□□ -0.14
RPS28-201ENST00000417088 WASHC2DQ5SRD0 308 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms