RNA–Protein interactions for RNA: ENST00000416778.5

CPNE1-210, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-210ENST00000416778 COL12A1Q99715 3063 aa17.16■□□□□ 0.34
CPNE1-210ENST00000416778 ZCWPW2A0A1B0GU75 182 aa17.16■□□□□ 0.34
CPNE1-210ENST00000416778 A0A1W2PPV9 198 aa17.16■□□□□ 0.34
CPNE1-210ENST00000416778 KRT87PA6NCN2 255 aa17.16■□□□□ 0.34
CPNE1-210ENST00000416778 GOLGA8MH3BSY2 632 aa17.16■□□□□ 0.34
CPNE1-210ENST00000416778 CNOT3O75175 753 aaKnown RBP17.16■□□□□ 0.34
CPNE1-210ENST00000416778 FKBP9O95302 570 aa17.16■□□□□ 0.34
CPNE1-210ENST00000416778 CD63P08962 238 aa17.16■□□□□ 0.34
CPNE1-210ENST00000416778 PKMP14618 531 aaKnown RBP17.16■□□□□ 0.34
CPNE1-210ENST00000416778 ALAS2P22557 587 aa17.16■□□□□ 0.34
CPNE1-210ENST00000416778 ATP5DP30049 168 aa17.16■□□□□ 0.34
CPNE1-210ENST00000416778 CCNFP41002 786 aa17.16■□□□□ 0.34
CPNE1-210ENST00000416778 BDKRB1P46663 353 aa17.16■□□□□ 0.34
CPNE1-210ENST00000416778 DHX34Q14147 1143 aaKnown RBP17.16■□□□□ 0.34
CPNE1-210ENST00000416778 CYP2A13Q16696 494 aa17.16■□□□□ 0.34
CPNE1-210ENST00000416778 NKAIN1Q4KMZ8 207 aa17.16■□□□□ 0.34
CPNE1-210ENST00000416778 ACSBG2Q5FVE4 666 aa17.16■□□□□ 0.34
CPNE1-210ENST00000416778 ZC3H12BQ5HYM0 836 aaKnown RBP17.16■□□□□ 0.34
CPNE1-210ENST00000416778 CASC4Q6P4E1 433 aa17.16■□□□□ 0.34
CPNE1-210ENST00000416778 TAX1BP1Q86VP1 789 aa17.16■□□□□ 0.34
CPNE1-210ENST00000416778 TMEM151BQ8IW70 566 aa17.16■□□□□ 0.34
CPNE1-210ENST00000416778 SLC35F6Q8N357 371 aa17.16■□□□□ 0.34
CPNE1-210ENST00000416778 NAT8LQ8N9F0 302 aa17.16■□□□□ 0.34
CPNE1-210ENST00000416778 OR2A1Q8NGT9 310 aa17.16■□□□□ 0.34
CPNE1-210ENST00000416778 SKA2Q8WVK7 121 aaPredicted RBP17.16■□□□□ 0.34
CPNE1-210ENST00000416778 FAM136AQ96C01 138 aa17.16■□□□□ 0.34
CPNE1-210ENST00000416778 SIGLEC10Q96LC7 697 aa17.16■□□□□ 0.34
CPNE1-210ENST00000416778 FOPNLQ96NB1 174 aa17.16■□□□□ 0.34
CPNE1-210ENST00000416778 SERPINB12Q96P63 405 aa17.16■□□□□ 0.34
CPNE1-210ENST00000416778 OSBPL9Q96SU4 736 aa17.16■□□□□ 0.34
CPNE1-210ENST00000416778 NAP1L3Q99457 506 aaPredicted RBP17.16■□□□□ 0.34
CPNE1-210ENST00000416778 NDC1Q9BTX1 674 aa17.16■□□□□ 0.34
CPNE1-210ENST00000416778 RAB11FIP5Q9BXF6 653 aa17.16■□□□□ 0.34
CPNE1-210ENST00000416778 XAB2Q9HCS7 855 aaKnown RBP17.16■□□□□ 0.34
CPNE1-210ENST00000416778 INTS7Q9NVH2 962 aaKnown RBP17.16■□□□□ 0.34
CPNE1-210ENST00000416778 IL1RAPL1Q9NZN1 696 aa17.16■□□□□ 0.34
CPNE1-210ENST00000416778 IFT80Q9P2H3 777 aaPredicted RBP17.16■□□□□ 0.34
CPNE1-210ENST00000416778 SRPK3Q9UPE1 567 aa17.16■□□□□ 0.34
CPNE1-210ENST00000416778 HECTD1Q9ULT8 2610 aa17.16■□□□□ 0.34
CPNE1-210ENST00000416778 ZNF185O15231 689 aa17.15■□□□□ 0.34
CPNE1-210ENST00000416778 PAMP19021 973 aa17.15■□□□□ 0.34
CPNE1-210ENST00000416778 ITGAXP20702 1163 aa17.15■□□□□ 0.34
CPNE1-210ENST00000416778 MAGEA3P43357 314 aa17.15■□□□□ 0.34
CPNE1-210ENST00000416778 CLCN7P51798 805 aa17.15■□□□□ 0.34
CPNE1-210ENST00000416778 PGDP52209 483 aa17.15■□□□□ 0.34
CPNE1-210ENST00000416778 CTBP1Q13363 440 aa17.15■□□□□ 0.34
CPNE1-210ENST00000416778 ATP1A4Q13733 1029 aa17.15■□□□□ 0.34
CPNE1-210ENST00000416778 FASTKQ14296 549 aaKnown RBP17.15■□□□□ 0.34
CPNE1-210ENST00000416778 FBXO42Q6P3S6 717 aa17.15■□□□□ 0.34
CPNE1-210ENST00000416778 CNSTQ6PJW8 725 aa17.15■□□□□ 0.34
CPNE1-210ENST00000416778 FDCSPQ8NFU4 85 aa17.15■□□□□ 0.34
CPNE1-210ENST00000416778 MAGEC3Q8TD91 643 aa17.15■□□□□ 0.34
CPNE1-210ENST00000416778 PTERQ96BW5 349 aa17.15■□□□□ 0.34
CPNE1-210ENST00000416778 INTS10Q9NVR2 710 aaKnown RBP17.15■□□□□ 0.34
CPNE1-210ENST00000416778 GPN3Q9UHW5 284 aaPredicted RBP17.15■□□□□ 0.34
CPNE1-210ENST00000416778 PADI2Q9Y2J8 665 aa17.15■□□□□ 0.34
CPNE1-210ENST00000416778 MED16Q9Y2X0 877 aa17.15■□□□□ 0.34
CPNE1-210ENST00000416778 PTRH2Q9Y3E5 179 aaKnown RBP17.15■□□□□ 0.34
CPNE1-210ENST00000416778 PRRC2CQ9Y520 2896 aaKnown RBP17.14■□□□□ 0.33
CPNE1-210ENST00000416778 PGRMC1O00264 195 aaKnown RBP17.14■□□□□ 0.33
CPNE1-210ENST00000416778 SRPX2O60687 465 aaPredicted RBP17.14■□□□□ 0.33
CPNE1-210ENST00000416778 CTSVO60911 334 aa17.14■□□□□ 0.33
CPNE1-210ENST00000416778 OTX2P32243 289 aa17.14■□□□□ 0.33
CPNE1-210ENST00000416778 ARSFP54793 590 aa17.14■□□□□ 0.33
CPNE1-210ENST00000416778 MLLT10P55197 1068 aa17.14■□□□□ 0.33
CPNE1-210ENST00000416778 FOXL2P58012 376 aa17.14■□□□□ 0.33
CPNE1-210ENST00000416778 YBX1P67809 324 aaKnown RBP17.14■□□□□ 0.33
CPNE1-210ENST00000416778 KLHL38Q2WGJ6 581 aa17.14■□□□□ 0.33
CPNE1-210ENST00000416778 ZNF549Q6P9A3 640 aa17.14■□□□□ 0.33
CPNE1-210ENST00000416778 CYHR1Q6ZMK1 362 aa17.14■□□□□ 0.33
CPNE1-210ENST00000416778 TTLL10Q6ZVT0 673 aa17.14■□□□□ 0.33
CPNE1-210ENST00000416778 SPNS2Q8IVW8 549 aa17.14■□□□□ 0.33
CPNE1-210ENST00000416778 DENND6AQ8IWF6 608 aa17.14■□□□□ 0.33
CPNE1-210ENST00000416778 OR2L3Q8NG85 312 aa17.14■□□□□ 0.33
CPNE1-210ENST00000416778 OR9A1PQ8NGU1 263 aa17.14■□□□□ 0.33
CPNE1-210ENST00000416778 OR2Y1Q8NGV0 311 aa17.14■□□□□ 0.33
CPNE1-210ENST00000416778 MIB2Q96AX9 1013 aa17.14■□□□□ 0.33
CPNE1-210ENST00000416778 IP6K3Q96PC2 410 aa17.14■□□□□ 0.33
CPNE1-210ENST00000416778 SLC30A3Q99726 388 aa17.14■□□□□ 0.33
CPNE1-210ENST00000416778 MIPEPQ99797 713 aa17.14■□□□□ 0.33
CPNE1-210ENST00000416778 TXLNGQ9NUQ3 528 aa17.14■□□□□ 0.33
CPNE1-210ENST00000416778 IRAK4Q9NWZ3 460 aa17.14■□□□□ 0.33
CPNE1-210ENST00000416778 SAMD15Q9P1V8 674 aa17.14■□□□□ 0.33
CPNE1-210ENST00000416778 KLHL42Q9P2K6 505 aa17.14■□□□□ 0.33
CPNE1-210ENST00000416778 PLAAQ9Y263 795 aa17.14■□□□□ 0.33
CPNE1-210ENST00000416778 VPS9D1Q9Y2B5 631 aa17.14■□□□□ 0.33
CPNE1-210ENST00000416778 PCDHGB7Q9Y5F8 929 aa17.14■□□□□ 0.33
CPNE1-210ENST00000416778 FITM1A5D6W6 292 aa17.13■□□□□ 0.33
CPNE1-210ENST00000416778 A6NL46 340 aa17.13■□□□□ 0.33
CPNE1-210ENST00000416778 PHF2O75151 1096 aa17.13■□□□□ 0.33
CPNE1-210ENST00000416778 PSIP1O75475 530 aaKnown RBP17.13■□□□□ 0.33
CPNE1-210ENST00000416778 SNRNP200O75643 2136 aaKnown RBP17.13■□□□□ 0.33
CPNE1-210ENST00000416778 UMODP07911 640 aa17.13■□□□□ 0.33
CPNE1-210ENST00000416778 F7P08709 466 aaPredicted RBP17.13■□□□□ 0.33
CPNE1-210ENST00000416778 MCM3P25205 808 aa17.13■□□□□ 0.33
CPNE1-210ENST00000416778 PSMB5P28074 263 aa17.13■□□□□ 0.33
CPNE1-210ENST00000416778 CD97P48960 835 aa17.13■□□□□ 0.33
CPNE1-210ENST00000416778 RRADP55042 308 aa17.13■□□□□ 0.33
CPNE1-210ENST00000416778 THOC5Q13769 683 aaKnown RBP17.13■□□□□ 0.33
CPNE1-210ENST00000416778 SLC9A5Q14940 896 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms