RNA–Protein interactions for RNA: ENST00000416769.2

LINC00339-202, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best) BASIC

Gene LINC00339, Length 1,077 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-202ENST00000416769 LINC00523Q86TU6 105 aa12.43□□□□□ -0.42
LINC00339-202ENST00000416769 PIANPQ8IYJ0 282 aa12.43□□□□□ -0.42
LINC00339-202ENST00000416769 CARFQ8N187 725 aa12.43□□□□□ -0.42
LINC00339-202ENST00000416769 LRRN4CLQ8ND94 238 aa12.43□□□□□ -0.42
LINC00339-202ENST00000416769 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.43□□□□□ -0.42
LINC00339-202ENST00000416769 DCUN1D1Q96GG9 259 aa12.43□□□□□ -0.42
LINC00339-202ENST00000416769 DNAJC1Q96KC8 554 aaKnown RBP12.43□□□□□ -0.42
LINC00339-202ENST00000416769 BARD1Q99728 777 aaKnown RBP12.43□□□□□ -0.42
LINC00339-202ENST00000416769 TFB2MQ9H5Q4 396 aaKnown RBP12.43□□□□□ -0.42
LINC00339-202ENST00000416769 LRRC40Q9H9A6 602 aa12.43□□□□□ -0.42
LINC00339-202ENST00000416769 PIH1D1Q9NWS0 290 aaKnown RBP12.43□□□□□ -0.42
LINC00339-202ENST00000416769 WHRNQ9P202 907 aa12.43□□□□□ -0.42
LINC00339-202ENST00000416769 DMGDHQ9UI17 866 aaKnown RBP12.43□□□□□ -0.42
LINC00339-202ENST00000416769 SERTAD3Q9UJW9 196 aa12.43□□□□□ -0.42
LINC00339-202ENST00000416769 SNX24Q9Y343 169 aa12.43□□□□□ -0.42
LINC00339-202ENST00000416769 COPG1Q9Y678 874 aaKnown RBP12.43□□□□□ -0.42
LINC00339-202ENST00000416769 FBN2P35556 2912 aa12.43□□□□□ -0.42
LINC00339-202ENST00000416769 POLQO75417 2590 aa12.42□□□□□ -0.42
LINC00339-202ENST00000416769 ARHGAP10A1A4S6 786 aa12.42□□□□□ -0.42
LINC00339-202ENST00000416769 C2orf74A8MZ97 194 aa12.42□□□□□ -0.42
LINC00339-202ENST00000416769 MSL3P1P0C860 447 aa12.42□□□□□ -0.42
LINC00339-202ENST00000416769 ATP1B2P14415 290 aaPredicted RBP12.42□□□□□ -0.42
LINC00339-202ENST00000416769 MC4RP32245 332 aa12.42□□□□□ -0.42
LINC00339-202ENST00000416769 FOLR3P41439 243 aa12.42□□□□□ -0.42
LINC00339-202ENST00000416769 RPL21P46778 160 aaKnown RBP12.42□□□□□ -0.42
LINC00339-202ENST00000416769 SARNPP82979 210 aaKnown RBP12.42□□□□□ -0.42
LINC00339-202ENST00000416769 KCNJ11Q14654 390 aa12.42□□□□□ -0.42
LINC00339-202ENST00000416769 KCTD19Q17RG1 926 aaPredicted RBP12.42□□□□□ -0.42
LINC00339-202ENST00000416769 RNASEH2BQ5TBB1 312 aaKnown RBP12.42□□□□□ -0.42
LINC00339-202ENST00000416769 Q6ZS92 163 aa12.42□□□□□ -0.42
LINC00339-202ENST00000416769 HOOK3Q86VS8 718 aa12.42□□□□□ -0.42
LINC00339-202ENST00000416769 PPIL6Q8IXY8 311 aa12.42□□□□□ -0.42
LINC00339-202ENST00000416769 TAB3Q8N5C8 712 aaPredicted RBP12.42□□□□□ -0.42
LINC00339-202ENST00000416769 NAT8LQ8N9F0 302 aa12.42□□□□□ -0.42
LINC00339-202ENST00000416769 MCUQ8NE86 351 aa12.42□□□□□ -0.42
LINC00339-202ENST00000416769 SNF8Q96H20 258 aa12.42□□□□□ -0.42
LINC00339-202ENST00000416769 COPS8Q99627 209 aa12.42□□□□□ -0.42
LINC00339-202ENST00000416769 CCM2Q9BSQ5 444 aa12.42□□□□□ -0.42
LINC00339-202ENST00000416769 TRIM31Q9BZY9 425 aa12.42□□□□□ -0.42
LINC00339-202ENST00000416769 ARNT2Q9HBZ2 717 aa12.42□□□□□ -0.42
LINC00339-202ENST00000416769 SLC6A20Q9NP91 592 aa12.42□□□□□ -0.42
LINC00339-202ENST00000416769 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.42□□□□□ -0.42
LINC00339-202ENST00000416769 C5AR2Q9P296 337 aa12.42□□□□□ -0.42
LINC00339-202ENST00000416769 FBXL4Q9UKA2 621 aa12.42□□□□□ -0.42
LINC00339-202ENST00000416769 G3BP2Q9UN86 482 aaKnown RBP12.42□□□□□ -0.42
LINC00339-202ENST00000416769 NOVA2Q9UNW9 492 aaKnown RBP12.42□□□□□ -0.42
LINC00339-202ENST00000416769 PKDREJQ9NTG1 2253 aa12.41□□□□□ -0.42
LINC00339-202ENST00000416769 APCP25054 2843 aa12.41□□□□□ -0.42
LINC00339-202ENST00000416769 IGLV3-16A0A075B6K0 115 aa12.41□□□□□ -0.42
LINC00339-202ENST00000416769 OR51F1A6NGY5 319 aa12.41□□□□□ -0.42
LINC00339-202ENST00000416769 AP3B1O00203 1094 aa12.41□□□□□ -0.42
LINC00339-202ENST00000416769 ZSCAN9O15535 394 aaPredicted RBP12.41□□□□□ -0.42
LINC00339-202ENST00000416769 LRRTM2O43300 516 aa12.41□□□□□ -0.42
LINC00339-202ENST00000416769 ZG16O60844 167 aa12.41□□□□□ -0.42
LINC00339-202ENST00000416769 SEC31AO94979 1220 aaKnown RBP12.41□□□□□ -0.42
LINC00339-202ENST00000416769 APRTP07741 180 aa12.41□□□□□ -0.42
LINC00339-202ENST00000416769 CHRM5P08912 532 aaPredicted RBP12.41□□□□□ -0.42
LINC00339-202ENST00000416769 TPH1P17752 444 aa12.41□□□□□ -0.42
LINC00339-202ENST00000416769 AGXTP21549 392 aa12.41□□□□□ -0.42
LINC00339-202ENST00000416769 MCM3P25205 808 aa12.41□□□□□ -0.42
LINC00339-202ENST00000416769 TNNT3P45378 269 aaPredicted RBP12.41□□□□□ -0.42
LINC00339-202ENST00000416769 GUCY2DQ02846 1103 aa12.41□□□□□ -0.42
LINC00339-202ENST00000416769 CAV1Q03135 178 aa12.41□□□□□ -0.42
LINC00339-202ENST00000416769 CALCOCO2Q13137 446 aa12.41□□□□□ -0.42
LINC00339-202ENST00000416769 SSPNQ14714 243 aa12.41□□□□□ -0.42
LINC00339-202ENST00000416769 MORF4L2Q15014 288 aa12.41□□□□□ -0.42
LINC00339-202ENST00000416769 DBN1Q16643 649 aa12.41□□□□□ -0.42
LINC00339-202ENST00000416769 NKAIN1Q4KMZ8 207 aa12.41□□□□□ -0.42
LINC00339-202ENST00000416769 TEX35Q5T0J7 233 aa12.41□□□□□ -0.42
LINC00339-202ENST00000416769 LYPLAL1Q5VWZ2 237 aa12.41□□□□□ -0.42
LINC00339-202ENST00000416769 RHBDD2Q6NTF9 364 aa12.41□□□□□ -0.42
LINC00339-202ENST00000416769 HIBCHQ6NVY1 386 aaPredicted RBP12.41□□□□□ -0.42
LINC00339-202ENST00000416769 MRPL14Q6P1L8 145 aaKnown RBP12.41□□□□□ -0.42
LINC00339-202ENST00000416769 LRRC8BQ6P9F7 803 aa12.41□□□□□ -0.42
LINC00339-202ENST00000416769 IGFL3Q6UXB1 125 aa12.41□□□□□ -0.42
LINC00339-202ENST00000416769 SNX20Q7Z614 316 aa12.41□□□□□ -0.42
LINC00339-202ENST00000416769 SERPINA9Q86WD7 417 aa12.41□□□□□ -0.42
LINC00339-202ENST00000416769 C2orf73Q8N5S3 287 aaPredicted RBP12.41□□□□□ -0.42
LINC00339-202ENST00000416769 METTL27Q8N6F8 245 aaPredicted RBP12.41□□□□□ -0.42
LINC00339-202ENST00000416769 CLEC1AQ8NC01 280 aa12.41□□□□□ -0.42
LINC00339-202ENST00000416769 OR2Y1Q8NGV0 311 aa12.41□□□□□ -0.42
LINC00339-202ENST00000416769 TFGQ92734 400 aaPredicted RBP12.41□□□□□ -0.42
LINC00339-202ENST00000416769 PCNX1Q96RV3 2341 aa12.41□□□□□ -0.42
LINC00339-202ENST00000416769 TBL1YQ9BQ87 522 aa12.41□□□□□ -0.42
LINC00339-202ENST00000416769 UNKQ9C0B0 810 aaKnown RBP12.41□□□□□ -0.42
LINC00339-202ENST00000416769 DPH5Q9H2P9 285 aa12.41□□□□□ -0.42
LINC00339-202ENST00000416769 FAM114A2Q9NRY5 505 aa12.41□□□□□ -0.42
LINC00339-202ENST00000416769 IFT80Q9P2H3 777 aaPredicted RBP12.41□□□□□ -0.42
LINC00339-202ENST00000416769 ANAPC5Q9UJX4 755 aa12.41□□□□□ -0.42
LINC00339-202ENST00000416769 OSGIN2Q9Y236 505 aa12.41□□□□□ -0.42
LINC00339-202ENST00000416769 PADI2Q9Y2J8 665 aa12.41□□□□□ -0.42
LINC00339-202ENST00000416769 HEBP2Q9Y5Z4 205 aa12.41□□□□□ -0.42
LINC00339-202ENST00000416769 C2CD3Q4AC94 2353 aa12.41□□□□□ -0.42
LINC00339-202ENST00000416769 OTOGQ6ZRI0 2925 aa12.4□□□□□ -0.42
LINC00339-202ENST00000416769 TCRBV7S3A2A0A539 114 aa12.4□□□□□ -0.42
LINC00339-202ENST00000416769 C2orf81A6NN90 581 aa12.4□□□□□ -0.42
LINC00339-202ENST00000416769 MATN2O00339 956 aa12.4□□□□□ -0.42
LINC00339-202ENST00000416769 IFRD1O00458 451 aaPredicted RBP12.4□□□□□ -0.42
LINC00339-202ENST00000416769 NRP2O60462 931 aa12.4□□□□□ -0.42
LINC00339-202ENST00000416769 RHOXF2BP0C7M4 288 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms