RNA–Protein interactions for RNA: ENST00000415017.1

CNN3-203, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 792 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-203ENST00000415017 PADI4Q9UM07 663 aa12.86□□□□□ -0.35
CNN3-203ENST00000415017 PLAGL1Q9UM63 463 aa12.86□□□□□ -0.35
CNN3-203ENST00000415017 TDRKHQ9Y2W6 561 aaKnown RBP12.86□□□□□ -0.35
CNN3-203ENST00000415017 DMXL1Q9Y485 3027 aa12.86□□□□□ -0.35
CNN3-203ENST00000415017 LRRC14BA6NHZ5 514 aa12.85□□□□□ -0.35
CNN3-203ENST00000415017 NCF1BA6NI72 391 aaPredicted RBP12.85□□□□□ -0.35
CNN3-203ENST00000415017 ZNF839A8K0R7 811 aa12.85□□□□□ -0.35
CNN3-203ENST00000415017 NCF1CA8MVU1 366 aaPredicted RBP12.85□□□□□ -0.35
CNN3-203ENST00000415017 BTN3A3O00478 584 aa12.85□□□□□ -0.35
CNN3-203ENST00000415017 SNNO75324 88 aaPredicted RBP12.85□□□□□ -0.35
CNN3-203ENST00000415017 STK16O75716 305 aa12.85□□□□□ -0.35
CNN3-203ENST00000415017 GFAPP14136 432 aa12.85□□□□□ -0.35
CNN3-203ENST00000415017 NCF1P14598 390 aaPredicted RBP12.85□□□□□ -0.35
CNN3-203ENST00000415017 NPPBP16860 134 aa12.85□□□□□ -0.35
CNN3-203ENST00000415017 CCND1P24385 295 aa12.85□□□□□ -0.35
CNN3-203ENST00000415017 ARRB2P32121 409 aa12.85□□□□□ -0.35
CNN3-203ENST00000415017 SERPINB5P36952 375 aa12.85□□□□□ -0.35
CNN3-203ENST00000415017 ATXN3P54252 364 aaPredicted RBP12.85□□□□□ -0.35
CNN3-203ENST00000415017 TBPL1P62380 186 aa12.85□□□□□ -0.35
CNN3-203ENST00000415017 PDK4Q16654 411 aa12.85□□□□□ -0.35
CNN3-203ENST00000415017 HHATQ5VTY9 493 aa12.85□□□□□ -0.35
CNN3-203ENST00000415017 LCTLQ6UWM7 567 aa12.85□□□□□ -0.35
CNN3-203ENST00000415017 LRRC70Q7Z2Q7 622 aa12.85□□□□□ -0.35
CNN3-203ENST00000415017 NUDCD3Q8IVD9 361 aa12.85□□□□□ -0.35
CNN3-203ENST00000415017 TRIM48Q8IWZ4 208 aa12.85□□□□□ -0.35
CNN3-203ENST00000415017 OR2A1Q8NGT9 310 aa12.85□□□□□ -0.35
CNN3-203ENST00000415017 LCN9Q8WX39 176 aa12.85□□□□□ -0.35
CNN3-203ENST00000415017 SMPDL3AQ92484 453 aa12.85□□□□□ -0.35
CNN3-203ENST00000415017 PHF21BQ96EK2 531 aa12.85□□□□□ -0.35
CNN3-203ENST00000415017 EGFL8Q99944 293 aa12.85□□□□□ -0.35
CNN3-203ENST00000415017 ATG10Q9H0Y0 220 aa12.85□□□□□ -0.35
CNN3-203ENST00000415017 EPB41L1Q9H4G0 881 aa12.85□□□□□ -0.35
CNN3-203ENST00000415017 SLC32A1Q9H598 525 aa12.85□□□□□ -0.35
CNN3-203ENST00000415017 STN1Q9H668 368 aaKnown RBP12.85□□□□□ -0.35
CNN3-203ENST00000415017 MLXIPLQ9NP71 852 aa12.85□□□□□ -0.35
CNN3-203ENST00000415017 INTS9Q9NV88 658 aaKnown RBP12.85□□□□□ -0.35
CNN3-203ENST00000415017 EPHA6Q9UF33 1036 aa12.85□□□□□ -0.35
CNN3-203ENST00000415017 CIDEBQ9UHD4 219 aa12.85□□□□□ -0.35
CNN3-203ENST00000415017 HAO1Q9UJM8 370 aa12.85□□□□□ -0.35
CNN3-203ENST00000415017 KLK4Q9Y5K2 254 aa12.85□□□□□ -0.35
CNN3-203ENST00000415017 ENTPD2Q9Y5L3 495 aa12.85□□□□□ -0.35
CNN3-203ENST00000415017 MDC1Q14676 2089 aaKnown RBP12.85□□□□□ -0.35
CNN3-203ENST00000415017 ADAMTS20P59510 1910 aa12.84□□□□□ -0.35
CNN3-203ENST00000415017 K7EPI3 171 aa12.84□□□□□ -0.35
CNN3-203ENST00000415017 B4GAT1O43505 415 aa12.84□□□□□ -0.35
CNN3-203ENST00000415017 NPHS1O60500 1241 aa12.84□□□□□ -0.35
CNN3-203ENST00000415017 PRAMEF4O60810 478 aa12.84□□□□□ -0.35
CNN3-203ENST00000415017 H2AFYO75367 372 aaKnown RBP12.84□□□□□ -0.35
CNN3-203ENST00000415017 FKBP9O95302 570 aa12.84□□□□□ -0.35
CNN3-203ENST00000415017 S100BP04271 92 aaPredicted RBP12.84□□□□□ -0.35
CNN3-203ENST00000415017 CHRM5P08912 532 aaPredicted RBP12.84□□□□□ -0.35
CNN3-203ENST00000415017 ACP1P24666 158 aa12.84□□□□□ -0.35
CNN3-203ENST00000415017 GRK2P25098 689 aa12.84□□□□□ -0.35
CNN3-203ENST00000415017 EEF1DP29692 281 aaKnown RBP12.84□□□□□ -0.35
CNN3-203ENST00000415017 CASP2P42575 452 aa12.84□□□□□ -0.35
CNN3-203ENST00000415017 GDF5P43026 501 aa12.84□□□□□ -0.35
CNN3-203ENST00000415017 HSPA7P48741 367 aa12.84□□□□□ -0.35
CNN3-203ENST00000415017 ATP1A2P50993 1020 aa12.84□□□□□ -0.35
CNN3-203ENST00000415017 NAGLUP54802 743 aa12.84□□□□□ -0.35
CNN3-203ENST00000415017 ASPHQ12797 758 aa12.84□□□□□ -0.35
CNN3-203ENST00000415017 NAE1Q13564 534 aa12.84□□□□□ -0.35
CNN3-203ENST00000415017 KRT33BQ14525 404 aa12.84□□□□□ -0.35
CNN3-203ENST00000415017 KIR2DS3Q14952 304 aa12.84□□□□□ -0.35
CNN3-203ENST00000415017 NR0B2Q15466 257 aa12.84□□□□□ -0.35
CNN3-203ENST00000415017 INAVAQ3KP66 663 aa12.84□□□□□ -0.35
CNN3-203ENST00000415017 PRAMEF9Q5VWM5 478 aa12.84□□□□□ -0.35
CNN3-203ENST00000415017 FRMD7Q6ZUT3 714 aa12.84□□□□□ -0.35
CNN3-203ENST00000415017 THOC6Q86W42 341 aaKnown RBP12.84□□□□□ -0.35
CNN3-203ENST00000415017 LSMEM2Q8N112 164 aa12.84□□□□□ -0.35
CNN3-203ENST00000415017 RAB42Q8N4Z0 105 aa12.84□□□□□ -0.35
CNN3-203ENST00000415017 LMNTD1Q8N9Z9 388 aa12.84□□□□□ -0.35
CNN3-203ENST00000415017 OR4E2Q8NGC2 313 aa12.84□□□□□ -0.35
CNN3-203ENST00000415017 EXT2Q93063 718 aa12.84□□□□□ -0.35
CNN3-203ENST00000415017 ESAMQ96AP7 390 aa12.84□□□□□ -0.35
CNN3-203ENST00000415017 WDR34Q96EX3 536 aa12.84□□□□□ -0.35
CNN3-203ENST00000415017 CNDP1Q96KN2 507 aa12.84□□□□□ -0.35
CNN3-203ENST00000415017 TRMOQ9BU70 441 aa12.84□□□□□ -0.35
CNN3-203ENST00000415017 TBC1D10AQ9BXI6 508 aa12.84□□□□□ -0.35
CNN3-203ENST00000415017 DRC3Q9H069 523 aa12.84□□□□□ -0.35
CNN3-203ENST00000415017 PCBD2Q9H0N5 130 aa12.84□□□□□ -0.35
CNN3-203ENST00000415017 XKR8Q9H6D3 395 aa12.84□□□□□ -0.35
CNN3-203ENST00000415017 SPHK1Q9NYA1 384 aa12.84□□□□□ -0.35
CNN3-203ENST00000415017 SEMA5BQ9P283 1151 aa12.84□□□□□ -0.35
CNN3-203ENST00000415017 IGHV1OR21-1A0A087WYE8 117 aa12.83□□□□□ -0.36
CNN3-203ENST00000415017 OR5K3A6NET4 321 aa12.83□□□□□ -0.36
CNN3-203ENST00000415017 C4orf47A7E2U8 309 aa12.83□□□□□ -0.36
CNN3-203ENST00000415017 OR7A17O14581 309 aa12.83□□□□□ -0.36
CNN3-203ENST00000415017 GDF9O60383 454 aa12.83□□□□□ -0.36
CNN3-203ENST00000415017 WFS1O76024 890 aa12.83□□□□□ -0.36
CNN3-203ENST00000415017 C9P02748 559 aa12.83□□□□□ -0.36
CNN3-203ENST00000415017 SERPINE1P05121 402 aa12.83□□□□□ -0.36
CNN3-203ENST00000415017 MDH1P40925 334 aaKnown RBP12.83□□□□□ -0.36
CNN3-203ENST00000415017 CAPZBP47756 277 aa12.83□□□□□ -0.36
CNN3-203ENST00000415017 GPLD1P80108 840 aa12.83□□□□□ -0.36
CNN3-203ENST00000415017 CFHR1Q03591 330 aa12.83□□□□□ -0.36
CNN3-203ENST00000415017 CLPPQ16740 277 aaPredicted RBP12.83□□□□□ -0.36
CNN3-203ENST00000415017 FBXO48Q5FWF7 155 aa12.83□□□□□ -0.36
CNN3-203ENST00000415017 PERM1Q5SV97 790 aa12.83□□□□□ -0.36
CNN3-203ENST00000415017 CAPN13Q6MZZ7 669 aaPredicted RBP12.83□□□□□ -0.36
CNN3-203ENST00000415017 GUSBP11Q6P575 273 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms