RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 OR51E2Q9H255 320 aa14.22□□□□□ -0.13
SEMA3F-202ENST00000413852 TP63Q9H3D4 680 aaPredicted RBP14.22□□□□□ -0.13
SEMA3F-202ENST00000413852 UBA2Q9UBT2 640 aaPredicted RBP14.22□□□□□ -0.13
SEMA3F-202ENST00000413852 NT5C1B-RDH14C9J2C7 533 aa14.22□□□□□ -0.13
SEMA3F-202ENST00000413852 K7ERQ8 282 aa14.22□□□□□ -0.13
SEMA3F-202ENST00000413852 ULK1O75385 1050 aa14.22□□□□□ -0.13
SEMA3F-202ENST00000413852 GJB5O95377 273 aa14.22□□□□□ -0.13
SEMA3F-202ENST00000413852 MSH3P20585 1137 aa14.22□□□□□ -0.13
SEMA3F-202ENST00000413852 ACVR2AP27037 513 aa14.22□□□□□ -0.13
SEMA3F-202ENST00000413852 EIF2DP41214 584 aaKnown RBP14.22□□□□□ -0.13
SEMA3F-202ENST00000413852 SLC19A1P41440 591 aa14.22□□□□□ -0.13
SEMA3F-202ENST00000413852 ST13P50502 369 aaKnown RBP14.22□□□□□ -0.13
SEMA3F-202ENST00000413852 SPATS1Q496A3 300 aa14.22□□□□□ -0.13
SEMA3F-202ENST00000413852 UBE2UQ5VVX9 321 aa14.22□□□□□ -0.13
SEMA3F-202ENST00000413852 NANOGNBQ7Z5D8 188 aa14.22□□□□□ -0.13
SEMA3F-202ENST00000413852 ADGRG2Q8IZP9 1017 aa14.22□□□□□ -0.13
SEMA3F-202ENST00000413852 PAF1Q8N7H5 531 aa14.22□□□□□ -0.13
SEMA3F-202ENST00000413852 ITPKCQ96DU7 683 aa14.22□□□□□ -0.13
SEMA3F-202ENST00000413852 CCDC115Q96NT0 180 aa14.22□□□□□ -0.13
SEMA3F-202ENST00000413852 SNX8Q9Y5X2 465 aa14.22□□□□□ -0.13
SEMA3F-202ENST00000413852 SLC25A14O95258 325 aaPredicted RBP14.22□□□□□ -0.13
SEMA3F-202ENST00000413852 GJA8P48165 433 aa14.22□□□□□ -0.13
SEMA3F-202ENST00000413852 DOC2BQ14184 412 aa14.22□□□□□ -0.13
SEMA3F-202ENST00000413852 LRIT3Q3SXY7 679 aa14.22□□□□□ -0.13
SEMA3F-202ENST00000413852 PARP15Q460N3 678 aa14.22□□□□□ -0.13
SEMA3F-202ENST00000413852 ZNF648Q5T619 568 aaPredicted RBP14.22□□□□□ -0.13
SEMA3F-202ENST00000413852 RSPO2Q6UXX9 243 aaPredicted RBP14.22□□□□□ -0.13
SEMA3F-202ENST00000413852 EFL1Q7Z2Z2 1120 aaKnown RBP14.22□□□□□ -0.13
SEMA3F-202ENST00000413852 RHOXF1Q8NHV9 184 aa14.22□□□□□ -0.13
SEMA3F-202ENST00000413852 APH1BQ8WW43 257 aa14.22□□□□□ -0.13
SEMA3F-202ENST00000413852 ACPTQ9BZG2 426 aa14.22□□□□□ -0.13
SEMA3F-202ENST00000413852 TNKS2Q9H2K2 1166 aa14.22□□□□□ -0.13
SEMA3F-202ENST00000413852 DUSP21Q9H596 190 aa14.22□□□□□ -0.13
SEMA3F-202ENST00000413852 KIF17Q9P2E2 1029 aa14.22□□□□□ -0.13
SEMA3F-202ENST00000413852 FCF1Q9Y324 198 aaKnown RBP14.22□□□□□ -0.13
SEMA3F-202ENST00000413852 SAMHD1Q9Y3Z3 626 aaKnown RBP14.22□□□□□ -0.13
SEMA3F-202ENST00000413852 NLRC5Q86WI3 1866 aa14.21□□□□□ -0.13
SEMA3F-202ENST00000413852 ANKRD66B4E2M5 251 aa14.21□□□□□ -0.13
SEMA3F-202ENST00000413852 SLC16A6O15403 523 aa14.21□□□□□ -0.13
SEMA3F-202ENST00000413852 NDUFB5O43674 189 aa14.21□□□□□ -0.13
SEMA3F-202ENST00000413852 CPSF4O95639 269 aaKnown RBP14.21□□□□□ -0.13
SEMA3F-202ENST00000413852 PDYNP01213 254 aa14.21□□□□□ -0.13
SEMA3F-202ENST00000413852 HTR7P34969 479 aa14.21□□□□□ -0.13
SEMA3F-202ENST00000413852 GNPDA1P46926 289 aa14.21□□□□□ -0.13
SEMA3F-202ENST00000413852 GZMMP51124 257 aa14.21□□□□□ -0.13
SEMA3F-202ENST00000413852 RPP38P78345 283 aaKnown RBP14.21□□□□□ -0.13
SEMA3F-202ENST00000413852 BCL2A1Q16548 175 aa14.21□□□□□ -0.13
SEMA3F-202ENST00000413852 FAM214AQ32MH5 1076 aa14.21□□□□□ -0.13
SEMA3F-202ENST00000413852 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.21□□□□□ -0.13
SEMA3F-202ENST00000413852 ULK4Q96C45 1275 aa14.21□□□□□ -0.13
SEMA3F-202ENST00000413852 REXO5Q96IC2 774 aaKnown RBP14.21□□□□□ -0.13
SEMA3F-202ENST00000413852 SUSD3Q96L08 255 aa14.21□□□□□ -0.13
SEMA3F-202ENST00000413852 CPPED1Q9BRF8 314 aaPredicted RBP14.21□□□□□ -0.13
SEMA3F-202ENST00000413852 TPK1Q9H3S4 243 aa14.21□□□□□ -0.13
SEMA3F-202ENST00000413852 LATS2Q9NRM7 1088 aa14.21□□□□□ -0.13
SEMA3F-202ENST00000413852 ARIH1Q9Y4X5 557 aaPredicted RBP14.21□□□□□ -0.13
SEMA3F-202ENST00000413852 A0A0C4DFX4 3053 aa14.21□□□□□ -0.13
SEMA3F-202ENST00000413852 DRGXA6NNA5 263 aa14.21□□□□□ -0.13
SEMA3F-202ENST00000413852 M0R082 166 aa14.21□□□□□ -0.13
SEMA3F-202ENST00000413852 OTCP00480 354 aa14.21□□□□□ -0.13
SEMA3F-202ENST00000413852 NPPAP01160 153 aa14.21□□□□□ -0.13
SEMA3F-202ENST00000413852 CCDC159P0C7I6 412 aa14.21□□□□□ -0.13
SEMA3F-202ENST00000413852 RYKP34925 604 aa14.21□□□□□ -0.13
SEMA3F-202ENST00000413852 MAD2L1BPQ15013 274 aaPredicted RBP14.21□□□□□ -0.13
SEMA3F-202ENST00000413852 DEPDC1Q5TB30 811 aa14.21□□□□□ -0.13
SEMA3F-202ENST00000413852 CLECL1Q8IZS7 167 aa14.21□□□□□ -0.13
SEMA3F-202ENST00000413852 ATL1Q8WXF7 558 aa14.21□□□□□ -0.13
SEMA3F-202ENST00000413852 S100ZQ8WXG8 99 aa14.21□□□□□ -0.13
SEMA3F-202ENST00000413852 APIPQ96GX9 242 aa14.21□□□□□ -0.13
SEMA3F-202ENST00000413852 MGME1Q9BQP7 344 aa14.21□□□□□ -0.13
SEMA3F-202ENST00000413852 TRIM62Q9BVG3 475 aa14.21□□□□□ -0.13
SEMA3F-202ENST00000413852 CLMPQ9H6B4 373 aa14.21□□□□□ -0.13
SEMA3F-202ENST00000413852 FBXO8Q9NRD0 319 aa14.21□□□□□ -0.13
SEMA3F-202ENST00000413852 MBD1Q9UIS9 605 aaPredicted RBP14.21□□□□□ -0.13
SEMA3F-202ENST00000413852 SNX6Q9UNH7 406 aa14.21□□□□□ -0.13
SEMA3F-202ENST00000413852 PTPRDP23468 1912 aa14.21□□□□□ -0.13
SEMA3F-202ENST00000413852 SCELO95171 688 aa14.2□□□□□ -0.14
SEMA3F-202ENST00000413852 OPN1SWP03999 348 aa14.2□□□□□ -0.14
SEMA3F-202ENST00000413852 S100BP04271 92 aaPredicted RBP14.2□□□□□ -0.14
SEMA3F-202ENST00000413852 POU2F1P14859 743 aa14.2□□□□□ -0.14
SEMA3F-202ENST00000413852 ACPPP15309 386 aa14.2□□□□□ -0.14
SEMA3F-202ENST00000413852 CPT1AP50416 773 aa14.2□□□□□ -0.14
SEMA3F-202ENST00000413852 COPZ1P61923 177 aa14.2□□□□□ -0.14
SEMA3F-202ENST00000413852 SKA2Q8WVK7 121 aaPredicted RBP14.2□□□□□ -0.14
SEMA3F-202ENST00000413852 APOLD1Q96LR9 279 aa14.2□□□□□ -0.14
SEMA3F-202ENST00000413852 DMRTB1Q96MA1 342 aa14.2□□□□□ -0.14
SEMA3F-202ENST00000413852 KCNS3Q9BQ31 491 aa14.2□□□□□ -0.14
SEMA3F-202ENST00000413852 PARVBQ9HBI1 364 aa14.2□□□□□ -0.14
SEMA3F-202ENST00000413852 KRT84Q9NSB2 600 aa14.2□□□□□ -0.14
SEMA3F-202ENST00000413852 SCN3BQ9NY72 215 aa14.2□□□□□ -0.14
SEMA3F-202ENST00000413852 F5H5T6 163 aa14.2□□□□□ -0.14
SEMA3F-202ENST00000413852 MANBAO00462 879 aa14.2□□□□□ -0.14
SEMA3F-202ENST00000413852 DSCR3O14972 297 aa14.2□□□□□ -0.14
SEMA3F-202ENST00000413852 RGS14O43566 566 aa14.2□□□□□ -0.14
SEMA3F-202ENST00000413852 AIREO43918 545 aa14.2□□□□□ -0.14
SEMA3F-202ENST00000413852 TTPAP49638 278 aa14.2□□□□□ -0.14
SEMA3F-202ENST00000413852 RACK1P63244 317 aaKnown RBP14.2□□□□□ -0.14
SEMA3F-202ENST00000413852 TOP3AQ13472 1001 aaPredicted RBP14.2□□□□□ -0.14
SEMA3F-202ENST00000413852 ZXDCQ2QGD7 858 aaPredicted RBP14.2□□□□□ -0.14
SEMA3F-202ENST00000413852 USP39Q53GS9 565 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms