RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 KLHL42Q9P2K6 505 aa14.27□□□□□ -0.13
LIMS4-201ENST00000413601 KCND3Q9UK17 655 aa14.27□□□□□ -0.13
LIMS4-201ENST00000413601 FAM187AA6NFU0 413 aa14.26□□□□□ -0.13
LIMS4-201ENST00000413601 C21orf140B9A014 251 aa14.26□□□□□ -0.13
LIMS4-201ENST00000413601 E7EQ34 232 aa14.26□□□□□ -0.13
LIMS4-201ENST00000413601 MEN1O00255 615 aa14.26□□□□□ -0.13
LIMS4-201ENST00000413601 ZNF749O43361 778 aa14.26□□□□□ -0.13
LIMS4-201ENST00000413601 RAD51CO43502 376 aa14.26□□□□□ -0.13
LIMS4-201ENST00000413601 VPS26AO75436 327 aa14.26□□□□□ -0.13
LIMS4-201ENST00000413601 OR2B3O76000 313 aa14.26□□□□□ -0.13
LIMS4-201ENST00000413601 AHSGP02765 367 aa14.26□□□□□ -0.13
LIMS4-201ENST00000413601 CATP04040 527 aaKnown RBP14.26□□□□□ -0.13
LIMS4-201ENST00000413601 KLK3P07288 261 aaPredicted RBP14.26□□□□□ -0.13
LIMS4-201ENST00000413601 CTSBP07858 339 aa14.26□□□□□ -0.13
LIMS4-201ENST00000413601 FAM87AP0C7U9 286 aa14.26□□□□□ -0.13
LIMS4-201ENST00000413601 TIAL1Q01085 375 aaKnown RBP eCLIP14.26□□□□□ -0.13
LIMS4-201ENST00000413601 MC1RQ01726 317 aa14.26□□□□□ -0.13
LIMS4-201ENST00000413601 COL9A2Q14055 689 aaPredicted RBP14.26□□□□□ -0.13
LIMS4-201ENST00000413601 ERV3-1Q14264 604 aa14.26□□□□□ -0.13
LIMS4-201ENST00000413601 FASTKQ14296 549 aaKnown RBP14.26□□□□□ -0.13
LIMS4-201ENST00000413601 FASTKD3Q14CZ7 662 aaKnown RBP14.26□□□□□ -0.13
LIMS4-201ENST00000413601 RBM20Q5T481 1227 aaKnown RBP14.26□□□□□ -0.13
LIMS4-201ENST00000413601 TEDDM1Q5T9Z0 273 aa14.26□□□□□ -0.13
LIMS4-201ENST00000413601 STEAP4Q687X5 459 aa14.26□□□□□ -0.13
LIMS4-201ENST00000413601 MAATS1Q7Z4T9 603 aa14.26□□□□□ -0.13
LIMS4-201ENST00000413601 CNTN4Q8IWV2 1026 aa14.26□□□□□ -0.13
LIMS4-201ENST00000413601 CPNE9Q8IYJ1 553 aa14.26□□□□□ -0.13
LIMS4-201ENST00000413601 GPR135Q8IZ08 494 aa14.26□□□□□ -0.13
LIMS4-201ENST00000413601 DSELQ8IZU8 1212 aa14.26□□□□□ -0.13
LIMS4-201ENST00000413601 FBXO36Q8NEA4 188 aa14.26□□□□□ -0.13
LIMS4-201ENST00000413601 OR9A1PQ8NGU1 263 aa14.26□□□□□ -0.13
LIMS4-201ENST00000413601 HMGCLL1Q8TB92 370 aa14.26□□□□□ -0.13
LIMS4-201ENST00000413601 LRFN5Q96NI6 719 aa14.26□□□□□ -0.13
LIMS4-201ENST00000413601 ERP44Q9BS26 406 aa14.26□□□□□ -0.13
LIMS4-201ENST00000413601 SLC7A5P2Q9GIP4 190 aa14.26□□□□□ -0.13
LIMS4-201ENST00000413601 CHST8Q9H2A9 424 aa14.26□□□□□ -0.13
LIMS4-201ENST00000413601 FAM114A2Q9NRY5 505 aa14.26□□□□□ -0.13
LIMS4-201ENST00000413601 SPATA7Q9P0W8 599 aa14.26□□□□□ -0.13
LIMS4-201ENST00000413601 PCDHGA6Q9Y5G7 932 aa14.26□□□□□ -0.13
LIMS4-201ENST00000413601 SEC16AO15027 2179 aa14.26□□□□□ -0.13
LIMS4-201ENST00000413601 A0A1W2PPV9 198 aa14.25□□□□□ -0.13
LIMS4-201ENST00000413601 H3BMH7 237 aa14.25□□□□□ -0.13
LIMS4-201ENST00000413601 MYO1CO00159 1063 aa14.25□□□□□ -0.13
LIMS4-201ENST00000413601 CREG1O75629 220 aa14.25□□□□□ -0.13
LIMS4-201ENST00000413601 FURINP09958 794 aa14.25□□□□□ -0.13
LIMS4-201ENST00000413601 MPC1LP0DKB6 136 aa14.25□□□□□ -0.13
LIMS4-201ENST00000413601 CBSLP0DN79 551 aa14.25□□□□□ -0.13
LIMS4-201ENST00000413601 ENO3P13929 434 aaPredicted RBP14.25□□□□□ -0.13
LIMS4-201ENST00000413601 MCM3P25205 808 aa14.25□□□□□ -0.13
LIMS4-201ENST00000413601 RORAP35398 523 aa14.25□□□□□ -0.13
LIMS4-201ENST00000413601 CBSP35520 551 aa14.25□□□□□ -0.13
LIMS4-201ENST00000413601 GRIA3P42263 894 aa14.25□□□□□ -0.13
LIMS4-201ENST00000413601 RPS18P62269 152 aaKnown RBP14.25□□□□□ -0.13
LIMS4-201ENST00000413601 CYP2A13Q16696 494 aa14.25□□□□□ -0.13
LIMS4-201ENST00000413601 DEFB109BQ30KR1 87 aa14.25□□□□□ -0.13
LIMS4-201ENST00000413601 CRTC2Q53ET0 693 aaPredicted RBP14.25□□□□□ -0.13
LIMS4-201ENST00000413601 FCRL6Q6DN72 434 aa14.25□□□□□ -0.13
LIMS4-201ENST00000413601 BORAQ6PGQ7 559 aa14.25□□□□□ -0.13
LIMS4-201ENST00000413601 FIGLAQ6QHK4 219 aa14.25□□□□□ -0.13
LIMS4-201ENST00000413601 CYHR1Q6ZMK1 362 aa14.25□□□□□ -0.13
LIMS4-201ENST00000413601 ZNF517Q6ZMY9 492 aaPredicted RBP14.25□□□□□ -0.13
LIMS4-201ENST00000413601 KIAA0408Q6ZU52 694 aa14.25□□□□□ -0.13
LIMS4-201ENST00000413601 PIWIL4Q7Z3Z4 852 aaKnown RBP14.25□□□□□ -0.13
LIMS4-201ENST00000413601 BBOF1Q8ND07 529 aa14.25□□□□□ -0.13
LIMS4-201ENST00000413601 ASB11Q8WXH4 323 aa14.25□□□□□ -0.13
LIMS4-201ENST00000413601 MED8Q96G25 268 aa14.25□□□□□ -0.13
LIMS4-201ENST00000413601 C16orf45Q96MC5 204 aaPredicted RBP14.25□□□□□ -0.13
LIMS4-201ENST00000413601 CATSPER2Q96P56 530 aa14.25□□□□□ -0.13
LIMS4-201ENST00000413601 PKP4Q99569 1192 aa14.25□□□□□ -0.13
LIMS4-201ENST00000413601 MIPEPQ99797 713 aa14.25□□□□□ -0.13
LIMS4-201ENST00000413601 GPR87Q9BY21 358 aa14.25□□□□□ -0.13
LIMS4-201ENST00000413601 ACTL8Q9H568 366 aa14.25□□□□□ -0.13
LIMS4-201ENST00000413601 PCMTD2Q9NV79 361 aa14.25□□□□□ -0.13
LIMS4-201ENST00000413601 INTS7Q9NVH2 962 aaKnown RBP14.25□□□□□ -0.13
LIMS4-201ENST00000413601 TRMT6Q9UJA5 497 aaKnown RBP14.25□□□□□ -0.13
LIMS4-201ENST00000413601 PLCL2Q9UPR0 1127 aa14.25□□□□□ -0.13
LIMS4-201ENST00000413601 E7ESA3 106 aa14.24□□□□□ -0.13
LIMS4-201ENST00000413601 GFYI3L273 518 aa14.24□□□□□ -0.13
LIMS4-201ENST00000413601 NDC80O14777 642 aa14.24□□□□□ -0.13
LIMS4-201ENST00000413601 SYF2O95926 243 aaKnown RBP14.24□□□□□ -0.13
LIMS4-201ENST00000413601 HBQ1P09105 142 aa14.24□□□□□ -0.13
LIMS4-201ENST00000413601 ERGP11308 486 aa14.24□□□□□ -0.13
LIMS4-201ENST00000413601 PTPN4P29074 926 aa14.24□□□□□ -0.13
LIMS4-201ENST00000413601 CDKN2DP55273 166 aa14.24□□□□□ -0.13
LIMS4-201ENST00000413601 RPS15P62841 145 aaKnown RBP14.24□□□□□ -0.13
LIMS4-201ENST00000413601 YBX1P67809 324 aaKnown RBP14.24□□□□□ -0.13
LIMS4-201ENST00000413601 CALCOCO2Q13137 446 aa14.24□□□□□ -0.13
LIMS4-201ENST00000413601 TSTA3Q13630 321 aaPredicted RBP14.24□□□□□ -0.13
LIMS4-201ENST00000413601 PTCHD3Q3KNS1 767 aa14.24□□□□□ -0.13
LIMS4-201ENST00000413601 DUPD1Q68J44 220 aa14.24□□□□□ -0.13
LIMS4-201ENST00000413601 UGT3A1Q6NUS8 523 aa14.24□□□□□ -0.13
LIMS4-201ENST00000413601 SUSD1Q6UWL2 747 aa14.24□□□□□ -0.13
LIMS4-201ENST00000413601 GALNT7Q86SF2 657 aa14.24□□□□□ -0.13
LIMS4-201ENST00000413601 MCATQ8IVS2 390 aaKnown RBP14.24□□□□□ -0.13
LIMS4-201ENST00000413601 SYTL1Q8IYJ3 562 aa14.24□□□□□ -0.13
LIMS4-201ENST00000413601 ZBED8Q8IZ13 594 aa14.24□□□□□ -0.13
LIMS4-201ENST00000413601 ZNF843Q8N446 348 aa14.24□□□□□ -0.13
LIMS4-201ENST00000413601 ZNF655Q8N720 491 aaPredicted RBP14.24□□□□□ -0.13
LIMS4-201ENST00000413601 OR2L3Q8NG85 312 aa14.24□□□□□ -0.13
LIMS4-201ENST00000413601 OR2A1Q8NGT9 310 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms