RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 PDE9AO76083 593 aa4.47□□□□□ -1.69
HMGB3P31-201ENST00000413333 OAZ2O95190 189 aa4.47□□□□□ -1.69
HMGB3P31-201ENST00000413333 PLGP00747 810 aaPredicted RBP4.47□□□□□ -1.69
HMGB3P31-201ENST00000413333 GH1P01241 217 aa4.47□□□□□ -1.69
HMGB3P31-201ENST00000413333 ANKRD34CP0C6C1 535 aa4.47□□□□□ -1.69
HMGB3P31-201ENST00000413333 UROSP10746 265 aa4.47□□□□□ -1.69
HMGB3P31-201ENST00000413333 TIA1P31483 386 aaKnown RBP eCLIP4.47□□□□□ -1.69
HMGB3P31-201ENST00000413333 CCKBRP32239 447 aa4.47□□□□□ -1.69
HMGB3P31-201ENST00000413333 CTNNB1P35222 781 aa4.47□□□□□ -1.69
HMGB3P31-201ENST00000413333 CDH11P55287 796 aa4.47□□□□□ -1.69
HMGB3P31-201ENST00000413333 RPL24P83731 157 aaKnown RBP4.47□□□□□ -1.69
HMGB3P31-201ENST00000413333 LTBQ06643 244 aa4.47□□□□□ -1.69
HMGB3P31-201ENST00000413333 ILF2Q12905 390 aaKnown RBP4.47□□□□□ -1.69
HMGB3P31-201ENST00000413333 RPA4Q13156 261 aa4.47□□□□□ -1.69
HMGB3P31-201ENST00000413333 NONOQ15233 471 aaKnown RBP eCLIP4.47□□□□□ -1.69
HMGB3P31-201ENST00000413333 UGP2Q16851 508 aa4.47□□□□□ -1.69
HMGB3P31-201ENST00000413333 UGT3A2Q3SY77 523 aa4.47□□□□□ -1.69
HMGB3P31-201ENST00000413333 SIRPB2Q5JXA9 342 aa4.47□□□□□ -1.69
HMGB3P31-201ENST00000413333 SPOUT1Q5T280 376 aaKnown RBP4.47□□□□□ -1.69
HMGB3P31-201ENST00000413333 UNQ6126/PRO20091Q6UXV3 157 aa4.47□□□□□ -1.69
HMGB3P31-201ENST00000413333 SLC9B2Q86UD5 537 aa4.47□□□□□ -1.69
HMGB3P31-201ENST00000413333 APCDD1Q8J025 514 aa4.47□□□□□ -1.69
HMGB3P31-201ENST00000413333 LGI2Q8N0V4 545 aa4.47□□□□□ -1.69
HMGB3P31-201ENST00000413333 DNAJC22Q8N4W6 341 aa4.47□□□□□ -1.69
HMGB3P31-201ENST00000413333 NCOA7Q8NI08 942 aa4.47□□□□□ -1.69
HMGB3P31-201ENST00000413333 UBLCP1Q8WVY7 318 aaPredicted RBP4.47□□□□□ -1.69
HMGB3P31-201ENST00000413333 CCDC47Q96A33 483 aaKnown RBP4.47□□□□□ -1.69
HMGB3P31-201ENST00000413333 SGF29Q96ES7 293 aa4.47□□□□□ -1.69
HMGB3P31-201ENST00000413333 AK8Q96MA6 479 aa4.47□□□□□ -1.69
HMGB3P31-201ENST00000413333 KLHL5Q96PQ7 755 aa4.47□□□□□ -1.69
HMGB3P31-201ENST00000413333 RTP3Q9BQQ7 232 aa4.47□□□□□ -1.69
HMGB3P31-201ENST00000413333 KRTAP17-1Q9BYP8 105 aa4.47□□□□□ -1.69
HMGB3P31-201ENST00000413333 TM6SF1Q9BZW5 370 aa4.47□□□□□ -1.69
HMGB3P31-201ENST00000413333 ZNF350Q9GZX5 532 aa4.47□□□□□ -1.69
HMGB3P31-201ENST00000413333 MIS12Q9H081 205 aa4.47□□□□□ -1.69
HMGB3P31-201ENST00000413333 DNAJC17Q9NVM6 304 aaKnown RBP4.47□□□□□ -1.69
HMGB3P31-201ENST00000413333 AKAP7Q9P0M2 348 aaPredicted RBP4.47□□□□□ -1.69
HMGB3P31-201ENST00000413333 HEG1Q9ULI3 1381 aa4.46□□□□□ -1.7
HMGB3P31-201ENST00000413333 CTAGE9A4FU28 777 aa4.46□□□□□ -1.7
HMGB3P31-201ENST00000413333 ASPDHA6ND91 283 aa4.46□□□□□ -1.7
HMGB3P31-201ENST00000413333 PLOD2O00469 737 aa4.46□□□□□ -1.7
HMGB3P31-201ENST00000413333 SYNGR3O43761 229 aa4.46□□□□□ -1.7
HMGB3P31-201ENST00000413333 SNX3O60493 162 aa4.46□□□□□ -1.7
HMGB3P31-201ENST00000413333 RTN2O75298 545 aa4.46□□□□□ -1.7
HMGB3P31-201ENST00000413333 BAG4O95429 457 aaKnown RBP4.46□□□□□ -1.7
HMGB3P31-201ENST00000413333 CTAGE8P0CG41 777 aa4.46□□□□□ -1.7
HMGB3P31-201ENST00000413333 P4HA1P13674 534 aa4.46□□□□□ -1.7
HMGB3P31-201ENST00000413333 DAOP14920 347 aa4.46□□□□□ -1.7
HMGB3P31-201ENST00000413333 TNFRSF8P28908 595 aa4.46□□□□□ -1.7
HMGB3P31-201ENST00000413333 TEFQ10587 303 aa4.46□□□□□ -1.7
HMGB3P31-201ENST00000413333 CBX3Q13185 183 aa4.46□□□□□ -1.7
HMGB3P31-201ENST00000413333 ODF4Q2M2E3 257 aa4.46□□□□□ -1.7
HMGB3P31-201ENST00000413333 NOTUMQ6P988 496 aa4.46□□□□□ -1.7
HMGB3P31-201ENST00000413333 PODNL1Q6PEZ8 512 aa4.46□□□□□ -1.7
HMGB3P31-201ENST00000413333 ZNF554Q86TJ5 538 aa4.46□□□□□ -1.7
HMGB3P31-201ENST00000413333 AMIGO1Q86WK6 493 aa4.46□□□□□ -1.7
HMGB3P31-201ENST00000413333 NUDT13Q86X67 352 aa4.46□□□□□ -1.7
HMGB3P31-201ENST00000413333 CCDC83Q8IWF9 413 aa4.46□□□□□ -1.7
HMGB3P31-201ENST00000413333 CTAGE4Q8IX94 777 aa4.46□□□□□ -1.7
HMGB3P31-201ENST00000413333 MMD2Q8IY49 270 aa4.46□□□□□ -1.7
HMGB3P31-201ENST00000413333 RASGEF1AQ8N9B8 481 aa4.46□□□□□ -1.7
HMGB3P31-201ENST00000413333 LMNTD1Q8N9Z9 388 aa4.46□□□□□ -1.7
HMGB3P31-201ENST00000413333 LNX1Q8TBB1 728 aaPredicted RBP4.46□□□□□ -1.7
HMGB3P31-201ENST00000413333 ST7LQ8TDW4 575 aa4.46□□□□□ -1.7
HMGB3P31-201ENST00000413333 PIGBQ92521 554 aa4.46□□□□□ -1.7
HMGB3P31-201ENST00000413333 ATP6V0A1Q93050 837 aa4.46□□□□□ -1.7
HMGB3P31-201ENST00000413333 PYCR2Q96C36 320 aa4.46□□□□□ -1.7
HMGB3P31-201ENST00000413333 URM1Q9BTM9 101 aaKnown RBP4.46□□□□□ -1.7
HMGB3P31-201ENST00000413333 SRD5A3Q9H8P0 318 aa4.46□□□□□ -1.7
HMGB3P31-201ENST00000413333 FKRPQ9H9S5 495 aa4.46□□□□□ -1.7
HMGB3P31-201ENST00000413333 A4GALTQ9NPC4 353 aa4.46□□□□□ -1.7
HMGB3P31-201ENST00000413333 TCF7L2Q9NQB0 619 aa4.46□□□□□ -1.7
HMGB3P31-201ENST00000413333 GSN-AS1Q9NRJ2 163 aa4.46□□□□□ -1.7
HMGB3P31-201ENST00000413333 MOSPD1Q9UJG1 213 aa4.46□□□□□ -1.7
HMGB3P31-201ENST00000413333 FBXL5Q9UKA1 691 aa4.46□□□□□ -1.7
HMGB3P31-201ENST00000413333 SLC7A7Q9UM01 511 aa4.46□□□□□ -1.7
HMGB3P31-201ENST00000413333 STX8Q9UNK0 236 aa4.46□□□□□ -1.7
HMGB3P31-201ENST00000413333 ITM2BQ9Y287 266 aa4.46□□□□□ -1.7
HMGB3P31-201ENST00000413333 GPRASP1Q5JY77 1395 aa4.45□□□□□ -1.7
HMGB3P31-201ENST00000413333 BICDL2A1A5D9 508 aa4.45□□□□□ -1.7
HMGB3P31-201ENST00000413333 CASTOR2A6NHX0 329 aa4.45□□□□□ -1.7
HMGB3P31-201ENST00000413333 KBTBD13C9JR72 458 aa4.45□□□□□ -1.7
HMGB3P31-201ENST00000413333 FLRT2O43155 660 aa4.45□□□□□ -1.7
HMGB3P31-201ENST00000413333 CTSVO60911 334 aa4.45□□□□□ -1.7
HMGB3P31-201ENST00000413333 RNASEH1O60930 286 aaKnown RBP4.45□□□□□ -1.7
HMGB3P31-201ENST00000413333 PAPSS2O95340 614 aaPredicted RBP4.45□□□□□ -1.7
HMGB3P31-201ENST00000413333 SLC16A8O95907 504 aa4.45□□□□□ -1.7
HMGB3P31-201ENST00000413333 PNPP00491 289 aa4.45□□□□□ -1.7
HMGB3P31-201ENST00000413333 NGFRP08138 427 aa4.45□□□□□ -1.7
HMGB3P31-201ENST00000413333 EPORP19235 508 aa4.45□□□□□ -1.7
HMGB3P31-201ENST00000413333 CD27P26842 260 aa4.45□□□□□ -1.7
HMGB3P31-201ENST00000413333 CASP3P42574 277 aa4.45□□□□□ -1.7
HMGB3P31-201ENST00000413333 NPBWR1P48145 328 aa4.45□□□□□ -1.7
HMGB3P31-201ENST00000413333 FMO5P49326 533 aa4.45□□□□□ -1.7
HMGB3P31-201ENST00000413333 RASGEF1BQ0VAM2 473 aa4.45□□□□□ -1.7
HMGB3P31-201ENST00000413333 LASP1Q14847 261 aaKnown RBP4.45□□□□□ -1.7
HMGB3P31-201ENST00000413333 KIF19Q2TAC6 998 aa4.45□□□□□ -1.7
HMGB3P31-201ENST00000413333 ITPRIPL2Q3MIP1 535 aa4.45□□□□□ -1.7
HMGB3P31-201ENST00000413333 SPDYCQ5MJ68 293 aa4.45□□□□□ -1.7
HMGB3P31-201ENST00000413333 CYP4A22Q5TCH4 519 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms