RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 GDPD1Q8N9F7 314 aa8.34□□□□□ -1.07
PBRM1-209ENST00000412587 FBXO27Q8NI29 283 aa8.34□□□□□ -1.07
PBRM1-209ENST00000412587 REPS1Q96D71 796 aa8.34□□□□□ -1.07
PBRM1-209ENST00000412587 TSNAXQ99598 290 aaKnown RBP8.34□□□□□ -1.07
PBRM1-209ENST00000412587 PIGUQ9H490 435 aa8.34□□□□□ -1.07
PBRM1-209ENST00000412587 C14orf119Q9NWQ9 140 aa8.34□□□□□ -1.07
PBRM1-209ENST00000412587 H2AFY2Q9P0M6 372 aaPredicted RBP8.34□□□□□ -1.07
PBRM1-209ENST00000412587 A0A0U1RQF3 1178 aa8.34□□□□□ -1.07
PBRM1-209ENST00000412587 CAPN14A8MX76 684 aa8.34□□□□□ -1.07
PBRM1-209ENST00000412587 KRBOX1C9JBD0 128 aa8.34□□□□□ -1.07
PBRM1-209ENST00000412587 PLOD2O00469 737 aa8.34□□□□□ -1.07
PBRM1-209ENST00000412587 GRM6O15303 877 aa8.34□□□□□ -1.07
PBRM1-209ENST00000412587 RASAL1O95294 804 aa8.34□□□□□ -1.07
PBRM1-209ENST00000412587 IL7RP16871 459 aa8.34□□□□□ -1.07
PBRM1-209ENST00000412587 CCND3P30281 292 aaPredicted RBP8.34□□□□□ -1.07
PBRM1-209ENST00000412587 CDKN2BP42772 138 aa8.34□□□□□ -1.07
PBRM1-209ENST00000412587 ALDH3A2P51648 485 aa8.34□□□□□ -1.07
PBRM1-209ENST00000412587 CSTF1Q05048 431 aaKnown RBP8.34□□□□□ -1.07
PBRM1-209ENST00000412587 ACSM2AQ08AH3 577 aa8.34□□□□□ -1.07
PBRM1-209ENST00000412587 CTBP1Q13363 440 aa8.34□□□□□ -1.07
PBRM1-209ENST00000412587 FAM187BQ17R55 369 aa8.34□□□□□ -1.07
PBRM1-209ENST00000412587 SOWAHAQ2M3V2 549 aa8.34□□□□□ -1.07
PBRM1-209ENST00000412587 ACSM2BQ68CK6 577 aa8.34□□□□□ -1.07
PBRM1-209ENST00000412587 DET1Q7L5Y6 550 aa8.34□□□□□ -1.07
PBRM1-209ENST00000412587 LYSMD3Q7Z3D4 306 aa8.34□□□□□ -1.07
PBRM1-209ENST00000412587 TTC29Q8NA56 475 aaPredicted RBP8.34□□□□□ -1.07
PBRM1-209ENST00000412587 NKD2Q969F2 451 aaPredicted RBP8.34□□□□□ -1.07
PBRM1-209ENST00000412587 SLC47A1Q96FL8 570 aa8.34□□□□□ -1.07
PBRM1-209ENST00000412587 SLC45A3Q96JT2 553 aa8.34□□□□□ -1.07
PBRM1-209ENST00000412587 COPS8Q99627 209 aa8.34□□□□□ -1.07
PBRM1-209ENST00000412587 TCF25Q9BQ70 676 aa8.34□□□□□ -1.07
PBRM1-209ENST00000412587 RNF39Q9H2S5 420 aa8.34□□□□□ -1.07
PBRM1-209ENST00000412587 C11orf49Q9H6J7 331 aa8.34□□□□□ -1.07
PBRM1-209ENST00000412587 AGO3Q9H9G7 860 aaKnown RBP8.34□□□□□ -1.07
PBRM1-209ENST00000412587 PTPRHQ9HD43 1115 aa8.34□□□□□ -1.07
PBRM1-209ENST00000412587 TRPC4Q9UBN4 977 aa8.34□□□□□ -1.07
PBRM1-209ENST00000412587 RNF6Q9Y252 685 aa8.34□□□□□ -1.07
PBRM1-209ENST00000412587 MEIOCA2RUB1 952 aa8.33□□□□□ -1.08
PBRM1-209ENST00000412587 C2CD4BA6NLJ0 364 aa8.33□□□□□ -1.08
PBRM1-209ENST00000412587 STX16-NPEPL1H3BU86 382 aa8.33□□□□□ -1.08
PBRM1-209ENST00000412587 DLGAP1O14490 977 aa8.33□□□□□ -1.08
PBRM1-209ENST00000412587 TRIM3O75382 744 aaPredicted RBP8.33□□□□□ -1.08
PBRM1-209ENST00000412587 SNX4O95219 450 aa8.33□□□□□ -1.08
PBRM1-209ENST00000412587 NFATC1O95644 943 aa8.33□□□□□ -1.08
PBRM1-209ENST00000412587 SNAI1O95863 264 aaPredicted RBP8.33□□□□□ -1.08
PBRM1-209ENST00000412587 CSF2P04141 144 aa8.33□□□□□ -1.08
PBRM1-209ENST00000412587 C8AP07357 584 aa8.33□□□□□ -1.08
PBRM1-209ENST00000412587 SRCP12931 536 aa8.33□□□□□ -1.08
PBRM1-209ENST00000412587 CHRNB2P17787 502 aa8.33□□□□□ -1.08
PBRM1-209ENST00000412587 ATP5F1P24539 256 aaPredicted RBP8.33□□□□□ -1.08
PBRM1-209ENST00000412587 ELK4P28324 431 aa8.33□□□□□ -1.08
PBRM1-209ENST00000412587 DDOSTP39656 456 aa8.33□□□□□ -1.08
PBRM1-209ENST00000412587 ASPAP45381 313 aa8.33□□□□□ -1.08
PBRM1-209ENST00000412587 PTP4A2Q12974 167 aa8.33□□□□□ -1.08
PBRM1-209ENST00000412587 LRIT3Q3SXY7 679 aa8.33□□□□□ -1.08
PBRM1-209ENST00000412587 CARM1Q86X55 608 aa8.33□□□□□ -1.08
PBRM1-209ENST00000412587 VWA5B2Q8N398 1253 aa8.33□□□□□ -1.08
PBRM1-209ENST00000412587 C2orf15Q8WU43 125 aaKnown RBP8.33□□□□□ -1.08
PBRM1-209ENST00000412587 PHF10Q8WUB8 498 aaKnown RBP8.33□□□□□ -1.08
PBRM1-209ENST00000412587 SGK3Q96BR1 496 aa8.33□□□□□ -1.08
PBRM1-209ENST00000412587 SIX2Q9NPC8 291 aa8.33□□□□□ -1.08
PBRM1-209ENST00000412587 RASSF1Q9NS23 344 aa8.33□□□□□ -1.08
PBRM1-209ENST00000412587 XPR1Q9UBH6 696 aa8.33□□□□□ -1.08
PBRM1-209ENST00000412587 A0A0J9YYE9 177 aa8.33□□□□□ -1.08
PBRM1-209ENST00000412587 INMT-MINDY4F8WBC2 141 aa8.33□□□□□ -1.08
PBRM1-209ENST00000412587 UBXN8O00124 270 aa8.33□□□□□ -1.08
PBRM1-209ENST00000412587 STX11O75558 287 aa8.33□□□□□ -1.08
PBRM1-209ENST00000412587 FAM155BO75949 473 aa8.33□□□□□ -1.08
PBRM1-209ENST00000412587 AP2A2O94973 939 aa8.33□□□□□ -1.08
PBRM1-209ENST00000412587 CDK1P06493 297 aa8.33□□□□□ -1.08
PBRM1-209ENST00000412587 CLTBP09497 229 aa8.33□□□□□ -1.08
PBRM1-209ENST00000412587 LCN1P31025 176 aa8.33□□□□□ -1.08
PBRM1-209ENST00000412587 ANKRD54Q6NXT1 300 aa8.33□□□□□ -1.08
PBRM1-209ENST00000412587 ZC3HC1Q86WB0 502 aaKnown RBP8.33□□□□□ -1.08
PBRM1-209ENST00000412587 PTGR2Q8N8N7 351 aaPredicted RBP8.33□□□□□ -1.08
PBRM1-209ENST00000412587 KREMEN2Q8NCW0 462 aa8.33□□□□□ -1.08
PBRM1-209ENST00000412587 ASB15Q8WXK1 588 aa8.33□□□□□ -1.08
PBRM1-209ENST00000412587 ZNF516Q92618 1163 aa8.33□□□□□ -1.08
PBRM1-209ENST00000412587 CCDC115Q96NT0 180 aa8.33□□□□□ -1.08
PBRM1-209ENST00000412587 MUS81Q96NY9 551 aa8.33□□□□□ -1.08
PBRM1-209ENST00000412587 ALG2Q9H553 416 aa8.33□□□□□ -1.08
PBRM1-209ENST00000412587 LIN7BQ9HAP6 207 aa8.33□□□□□ -1.08
PBRM1-209ENST00000412587 ARHGEF4Q9NR80 690 aa8.33□□□□□ -1.08
PBRM1-209ENST00000412587 SNX15Q9NRS6 342 aa8.33□□□□□ -1.08
PBRM1-209ENST00000412587 SIRPGQ9P1W8 387 aa8.33□□□□□ -1.08
PBRM1-209ENST00000412587 BOLA1Q9Y3E2 137 aa8.33□□□□□ -1.08
PBRM1-209ENST00000412587 A0A1B0GVM2 712 aa8.33□□□□□ -1.08
PBRM1-209ENST00000412587 TCAF2A6NFQ2 919 aa8.33□□□□□ -1.08
PBRM1-209ENST00000412587 YJEFN3A6XGL0 299 aa8.33□□□□□ -1.08
PBRM1-209ENST00000412587 NRP1O14786 923 aa8.33□□□□□ -1.08
PBRM1-209ENST00000412587 C9P02748 559 aa8.33□□□□□ -1.08
PBRM1-209ENST00000412587 CCL5P13501 91 aa8.33□□□□□ -1.08
PBRM1-209ENST00000412587 OGNP20774 298 aaKnown RBP8.33□□□□□ -1.08
PBRM1-209ENST00000412587 MAOBP27338 520 aa8.33□□□□□ -1.08
PBRM1-209ENST00000412587 RPS5P46782 204 aaKnown RBP8.33□□□□□ -1.08
PBRM1-209ENST00000412587 RACK1P63244 317 aaKnown RBP8.33□□□□□ -1.08
PBRM1-209ENST00000412587 FADDQ13158 208 aa8.33□□□□□ -1.08
PBRM1-209ENST00000412587 FGFBP1Q14512 234 aa8.33□□□□□ -1.08
PBRM1-209ENST00000412587 SLC9B1Q4ZJI4 515 aa8.33□□□□□ -1.08
PBRM1-209ENST00000412587 C6orf141Q5SZD1 244 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms