RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 AADACL2Q6P093 401 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 KLBQ86Z14 1044 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 RNF113BQ8IZP6 322 aaKnown RBP5.12□□□□□ -1.59
HERC4-205ENST00000412272 RBFAQ8N0V3 343 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 SVOPLQ8N434 492 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 SVOPQ8N4V2 548 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 BEST2Q8NFU1 509 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 RNASE11Q8TAA1 199 aaKnown RBP5.12□□□□□ -1.59
HERC4-205ENST00000412272 LIPHQ8WWY8 451 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.12□□□□□ -1.59
HERC4-205ENST00000412272 MISP3Q96FF7 219 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 CALML4Q96GE6 196 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 ZNF385AQ96PM9 386 aaKnown RBP5.12□□□□□ -1.59
HERC4-205ENST00000412272 ADGRE3Q9BY15 652 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 KCNK12Q9HB15 430 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 RASSF1Q9NS23 344 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 SDHAF2Q9NX18 166 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 ZIM2Q9NZV7 527 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 NUFIP1Q9UHK0 495 aaKnown RBP5.12□□□□□ -1.59
HERC4-205ENST00000412272 RNF24Q9Y225 148 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 DLGAP4Q9Y2H0 992 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 A3GALT2U3KPV4 340 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 SLIT2O94813 1529 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 CACNA1SQ13698 1873 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 DENND3A2RUS2 1198 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 CCDC85CA6NKD9 419 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 POLRMTO00411 1230 aaKnown RBP5.12□□□□□ -1.59
HERC4-205ENST00000412272 ZNF195O14628 629 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 GSTA4O15217 222 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 TBC1D4O60343 1298 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 NOBOXO60393 691 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 LPXNO60711 386 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 TSPAN12O95859 305 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 ZNF888P0CJ79 500 aaPredicted RBP5.12□□□□□ -1.59
HERC4-205ENST00000412272 CBSLP0DN79 551 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 RNH1P13489 461 aaKnown RBP5.12□□□□□ -1.59
HERC4-205ENST00000412272 ALDH4A1P30038 563 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 RFC2P35250 354 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 CBSP35520 551 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 MAPK9P45984 424 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 KCNJ3P48549 501 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 MARCKSL1P49006 195 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 NME5P56597 212 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 SNTB1Q13884 538 aaKnown RBP5.12□□□□□ -1.59
HERC4-205ENST00000412272 HABP2Q14520 560 aaPredicted RBP5.12□□□□□ -1.59
HERC4-205ENST00000412272 STARD3Q14849 445 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 TAB1Q15750 504 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 SYT16Q17RD7 645 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 ATAT1Q5SQI0 421 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 CRTC3Q6UUV7 619 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 TMEM132CQ8N3T6 1108 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 SYT14Q8NB59 555 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 OR13C3Q8NGS6 347 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 MRPL38Q96DV4 380 aaKnown RBP5.12□□□□□ -1.59
HERC4-205ENST00000412272 ZNF514Q96K75 400 aaPredicted RBP5.12□□□□□ -1.59
HERC4-205ENST00000412272 ZSWIM3Q96MP5 696 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 CAMKK2Q96RR4 588 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 ZSCAN10Q96SZ4 725 aaPredicted RBP5.12□□□□□ -1.59
HERC4-205ENST00000412272 NUDT16L1Q9BRJ7 211 aaKnown RBP5.12□□□□□ -1.59
HERC4-205ENST00000412272 FUNDC2Q9BWH2 189 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 C1QTNF6Q9BXI9 259 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 BEX2Q9BXY8 128 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 OR51V1Q9H2C8 321 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 ZNF385DQ9H6B1 395 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 MID2Q9UJV3 735 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 HSPB11Q9Y547 144 aa5.12□□□□□ -1.59
HERC4-205ENST00000412272 V9GY48 417 aaPredicted RBP5.12□□□□□ -1.59
HERC4-205ENST00000412272 BAZ2AQ9UIF9 1905 aaKnown RBP5.11□□□□□ -1.59
HERC4-205ENST00000412272 TCRBV3S1A0A5B6 114 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 PP2D1A8MPX8 630 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 AIM2O14862 343 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 PMM2O15305 246 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 PHGDHO43175 533 aaKnown RBP5.11□□□□□ -1.59
HERC4-205ENST00000412272 CALUO43852 315 aaPredicted RBP5.11□□□□□ -1.59
HERC4-205ENST00000412272 CNTN5O94779 1100 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 ATG12O94817 140 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 SUPT20HL2P0C7V6 817 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 OR8G3PP0DMU2 310 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 BGNP21810 368 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 AHCYP23526 432 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 ATP2B4P23634 1241 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 CCT3P49368 545 aaKnown RBP5.11□□□□□ -1.59
HERC4-205ENST00000412272 PRMT2P55345 433 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 CTSWP56202 376 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 GABARAPL2P60520 117 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 MRPS22P82650 360 aaKnown RBP5.11□□□□□ -1.59
HERC4-205ENST00000412272 SEMG2Q02383 582 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 NFYCQ13952 458 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 CAMK1Q14012 370 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 SERTAD2Q14140 314 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 SMCO1Q147U7 214 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 KNOP1Q1ED39 458 aaKnown RBP5.11□□□□□ -1.59
HERC4-205ENST00000412272 MICBQ29980 383 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 ALG11Q2TAA5 492 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 LCN1P1Q5VSP4 162 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 TAF2Q6P1X5 1199 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 DENND1BQ6P3S1 775 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 ZNF773Q6PK81 442 aa5.11□□□□□ -1.59
HERC4-205ENST00000412272 ZNF517Q6ZMY9 492 aaPredicted RBP5.11□□□□□ -1.59
HERC4-205ENST00000412272 PTAR1Q7Z6K3 402 aaPredicted RBP5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms