RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 SERPINB8P50452 374 aa13.46□□□□□ -0.25
CPNE1-206ENST00000412056 IRF9Q00978 393 aa13.46□□□□□ -0.25
CPNE1-206ENST00000412056 DLG1Q12959 904 aa13.46□□□□□ -0.25
CPNE1-206ENST00000412056 ARHGAP19Q14CB8 494 aa13.46□□□□□ -0.25
CPNE1-206ENST00000412056 TSNQ15631 228 aaKnown RBP13.46□□□□□ -0.25
CPNE1-206ENST00000412056 ZIC1Q15915 447 aa13.46□□□□□ -0.25
CPNE1-206ENST00000412056 PPP1R3AQ16821 1122 aa13.46□□□□□ -0.25
CPNE1-206ENST00000412056 IGF2-ASQ6U949 168 aa13.46□□□□□ -0.25
CPNE1-206ENST00000412056 TAOK1Q7L7X3 1001 aa13.46□□□□□ -0.25
CPNE1-206ENST00000412056 SYTL1Q8IYJ3 562 aa13.46□□□□□ -0.25
CPNE1-206ENST00000412056 C19orf47Q8N9M1 422 aaKnown RBP13.46□□□□□ -0.25
CPNE1-206ENST00000412056 SMPDL3AQ92484 453 aa13.46□□□□□ -0.25
CPNE1-206ENST00000412056 ANKRD7Q92527 254 aa13.46□□□□□ -0.25
CPNE1-206ENST00000412056 USP7Q93009 1102 aa13.46□□□□□ -0.25
CPNE1-206ENST00000412056 UBXN10Q96LJ8 280 aa13.46□□□□□ -0.25
CPNE1-206ENST00000412056 MIPEPQ99797 713 aa13.46□□□□□ -0.25
CPNE1-206ENST00000412056 CTRCQ99895 268 aa13.46□□□□□ -0.25
CPNE1-206ENST00000412056 CCDC86Q9H6F5 360 aaKnown RBP13.46□□□□□ -0.25
CPNE1-206ENST00000412056 APMAPQ9HDC9 416 aa13.46□□□□□ -0.25
CPNE1-206ENST00000412056 SOHLH2Q9NX45 425 aa13.46□□□□□ -0.25
CPNE1-206ENST00000412056 SLC39A1Q9NY26 324 aa13.46□□□□□ -0.25
CPNE1-206ENST00000412056 UTP6Q9NYH9 597 aaKnown RBP13.46□□□□□ -0.25
CPNE1-206ENST00000412056 CTNNAL1Q9UBT7 734 aa13.46□□□□□ -0.25
CPNE1-206ENST00000412056 NOVA2Q9UNW9 492 aaKnown RBP13.46□□□□□ -0.25
CPNE1-206ENST00000412056 BTRCQ9Y297 605 aa13.46□□□□□ -0.25
CPNE1-206ENST00000412056 KLHL20Q9Y2M5 609 aa13.46□□□□□ -0.25
CPNE1-206ENST00000412056 C9orf172C9J069 976 aa13.45□□□□□ -0.26
CPNE1-206ENST00000412056 TRIM49D1C9J1S8 452 aa13.45□□□□□ -0.26
CPNE1-206ENST00000412056 E7ENX8 843 aa13.45□□□□□ -0.26
CPNE1-206ENST00000412056 KRT38O76015 456 aa13.45□□□□□ -0.26
CPNE1-206ENST00000412056 GUCA1CO95843 209 aa13.45□□□□□ -0.26
CPNE1-206ENST00000412056 CAPNS1P04632 268 aa13.45□□□□□ -0.26
CPNE1-206ENST00000412056 C2P06681 752 aa13.45□□□□□ -0.26
CPNE1-206ENST00000412056 ENO2P09104 434 aaPredicted RBP13.45□□□□□ -0.26
CPNE1-206ENST00000412056 EBLN1P0CF75 366 aa13.45□□□□□ -0.26
CPNE1-206ENST00000412056 FOLR1P15328 257 aa13.45□□□□□ -0.26
CPNE1-206ENST00000412056 MAGP20916 626 aa13.45□□□□□ -0.26
CPNE1-206ENST00000412056 TYK2P29597 1187 aa13.45□□□□□ -0.26
CPNE1-206ENST00000412056 HSD17B3P37058 310 aa13.45□□□□□ -0.26
CPNE1-206ENST00000412056 HSD17B2P37059 387 aa13.45□□□□□ -0.26
CPNE1-206ENST00000412056 MLLT3P42568 568 aaPredicted RBP13.45□□□□□ -0.26
CPNE1-206ENST00000412056 ARL4DP49703 201 aa13.45□□□□□ -0.26
CPNE1-206ENST00000412056 YBX1P67809 324 aaKnown RBP13.45□□□□□ -0.26
CPNE1-206ENST00000412056 HSD11B2P80365 405 aa13.45□□□□□ -0.26
CPNE1-206ENST00000412056 MC2RQ01718 297 aa13.45□□□□□ -0.26
CPNE1-206ENST00000412056 TAP2Q03519 686 aa13.45□□□□□ -0.26
CPNE1-206ENST00000412056 FOXM1Q08050 763 aa13.45□□□□□ -0.26
CPNE1-206ENST00000412056 TBC1D25Q3MII6 688 aa13.45□□□□□ -0.26
CPNE1-206ENST00000412056 TAF1BQ53T94 588 aaPredicted RBP13.45□□□□□ -0.26
CPNE1-206ENST00000412056 EMBQ6PCB8 327 aa13.45□□□□□ -0.26
CPNE1-206ENST00000412056 ADGRD1Q6QNK2 874 aa13.45□□□□□ -0.26
CPNE1-206ENST00000412056 ADAMTSL2Q86TH1 951 aa13.45□□□□□ -0.26
CPNE1-206ENST00000412056 LRRC56Q8IYG6 542 aaPredicted RBP13.45□□□□□ -0.26
CPNE1-206ENST00000412056 CENPLQ8N0S6 344 aaPredicted RBP13.45□□□□□ -0.26
CPNE1-206ENST00000412056 LSMEM2Q8N112 164 aa13.45□□□□□ -0.26
CPNE1-206ENST00000412056 D2HGDHQ8N465 521 aa13.45□□□□□ -0.26
CPNE1-206ENST00000412056 OR2A1Q8NGT9 310 aa13.45□□□□□ -0.26
CPNE1-206ENST00000412056 KCTD4Q8WVF5 259 aa13.45□□□□□ -0.26
CPNE1-206ENST00000412056 SLC22A18Q96BI1 424 aa13.45□□□□□ -0.26
CPNE1-206ENST00000412056 PTERQ96BW5 349 aa13.45□□□□□ -0.26
CPNE1-206ENST00000412056 CCDC138Q96M89 665 aa13.45□□□□□ -0.26
CPNE1-206ENST00000412056 OR6C1Q96RD1 312 aa13.45□□□□□ -0.26
CPNE1-206ENST00000412056 TAAR9Q96RI9 348 aa13.45□□□□□ -0.26
CPNE1-206ENST00000412056 ACAT2Q9BWD1 397 aa13.45□□□□□ -0.26
CPNE1-206ENST00000412056 TRIM54Q9BYV2 358 aa13.45□□□□□ -0.26
CPNE1-206ENST00000412056 ATG10Q9H0Y0 220 aa13.45□□□□□ -0.26
CPNE1-206ENST00000412056 IGSF5Q9NSI5 407 aa13.45□□□□□ -0.26
CPNE1-206ENST00000412056 ABCF3Q9NUQ8 709 aa13.45□□□□□ -0.26
CPNE1-206ENST00000412056 ARL15Q9NXU5 204 aa13.45□□□□□ -0.26
CPNE1-206ENST00000412056 FOXJ2Q9P0K8 574 aa13.45□□□□□ -0.26
CPNE1-206ENST00000412056 DKK4Q9UBT3 224 aa13.45□□□□□ -0.26
CPNE1-206ENST00000412056 RAB21Q9UL25 225 aa13.45□□□□□ -0.26
CPNE1-206ENST00000412056 B3GALT1Q9Y5Z6 326 aa13.45□□□□□ -0.26
CPNE1-206ENST00000412056 FER1L5A0AVI2 2057 aa13.44□□□□□ -0.26
CPNE1-206ENST00000412056 A0A087X1B8 175 aa13.44□□□□□ -0.26
CPNE1-206ENST00000412056 A0A096LPK6 155 aa13.44□□□□□ -0.26
CPNE1-206ENST00000412056 PABPN1LA6NDY0 278 aaKnown RBP13.44□□□□□ -0.26
CPNE1-206ENST00000412056 ZNF839A8K0R7 811 aa13.44□□□□□ -0.26
CPNE1-206ENST00000412056 LTA4HP09960 611 aaKnown RBP13.44□□□□□ -0.26
CPNE1-206ENST00000412056 HIST1H2AGP0C0S8 130 aaPredicted RBP13.44□□□□□ -0.26
CPNE1-206ENST00000412056 HIST1H2ADP20671 130 aa13.44□□□□□ -0.26
CPNE1-206ENST00000412056 CNTFP26441 200 aa13.44□□□□□ -0.26
CPNE1-206ENST00000412056 SLC5A2P31639 672 aa13.44□□□□□ -0.26
CPNE1-206ENST00000412056 RPA3P35244 121 aaPredicted RBP13.44□□□□□ -0.26
CPNE1-206ENST00000412056 MAGEA12P43365 314 aa13.44□□□□□ -0.26
CPNE1-206ENST00000412056 AP1S2P56377 157 aa13.44□□□□□ -0.26
CPNE1-206ENST00000412056 ATP6V0D1P61421 351 aa13.44□□□□□ -0.26
CPNE1-206ENST00000412056 TBPL1P62380 186 aa13.44□□□□□ -0.26
CPNE1-206ENST00000412056 TUBB3Q13509 450 aa13.44□□□□□ -0.26
CPNE1-206ENST00000412056 OR4D1Q15615 310 aa13.44□□□□□ -0.26
CPNE1-206ENST00000412056 SF1Q15637 639 aaKnown RBP13.44□□□□□ -0.26
CPNE1-206ENST00000412056 GPR19Q15760 415 aa13.44□□□□□ -0.26
CPNE1-206ENST00000412056 ZXDCQ2QGD7 858 aaPredicted RBP13.44□□□□□ -0.26
CPNE1-206ENST00000412056 KIAA1614Q5VZ46 1190 aa13.44□□□□□ -0.26
CPNE1-206ENST00000412056 AGTRAPQ6RW13 159 aa13.44□□□□□ -0.26
CPNE1-206ENST00000412056 FRA10AC1Q70Z53 315 aa13.44□□□□□ -0.26
CPNE1-206ENST00000412056 CLEC14AQ86T13 490 aa13.44□□□□□ -0.26
CPNE1-206ENST00000412056 TBC1D1Q86TI0 1168 aaPredicted RBP13.44□□□□□ -0.26
CPNE1-206ENST00000412056 OR2L3Q8NG85 312 aa13.44□□□□□ -0.26
CPNE1-206ENST00000412056 ZCCHC14Q8WYQ9 949 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms