RNA–Protein interactions for RNA: ENST00000411971.5

SCAMP4-203, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 783 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-203ENST00000411971 ALAS2P22557 587 aa15.82■□□□□ 0.12
SCAMP4-203ENST00000411971 PLOD1Q02809 727 aaPredicted RBP15.82■□□□□ 0.12
SCAMP4-203ENST00000411971 FASTKQ14296 549 aaKnown RBP15.82■□□□□ 0.12
SCAMP4-203ENST00000411971 PCID2Q5JVF3 399 aa15.82■□□□□ 0.12
SCAMP4-203ENST00000411971 FHL5Q5TD97 284 aa15.82■□□□□ 0.12
SCAMP4-203ENST00000411971 MEI1Q5TIA1 1274 aa15.82■□□□□ 0.12
SCAMP4-203ENST00000411971 VWA5B1Q5TIE3 1220 aa15.82■□□□□ 0.12
SCAMP4-203ENST00000411971 FRMPD2BQ6IN97 320 aa15.82■□□□□ 0.12
SCAMP4-203ENST00000411971 TLDC1Q6P9B6 456 aa15.82■□□□□ 0.12
SCAMP4-203ENST00000411971 DCUN1D3Q8IWE4 304 aa15.82■□□□□ 0.12
SCAMP4-203ENST00000411971 CISD2Q8N5K1 135 aaKnown RBP15.82■□□□□ 0.12
SCAMP4-203ENST00000411971 RNF10Q8N5U6 811 aaKnown RBP15.82■□□□□ 0.12
SCAMP4-203ENST00000411971 PTERQ96BW5 349 aa15.82■□□□□ 0.12
SCAMP4-203ENST00000411971 BIRC8Q96P09 236 aa15.82■□□□□ 0.12
SCAMP4-203ENST00000411971 NDC1Q9BTX1 674 aa15.82■□□□□ 0.12
SCAMP4-203ENST00000411971 SLC6A20Q9NP91 592 aa15.82■□□□□ 0.12
SCAMP4-203ENST00000411971 TXLNGQ9NUQ3 528 aa15.82■□□□□ 0.12
SCAMP4-203ENST00000411971 IRAK4Q9NWZ3 460 aa15.82■□□□□ 0.12
SCAMP4-203ENST00000411971 CTSFQ9UBX1 484 aa15.82■□□□□ 0.12
SCAMP4-203ENST00000411971 NDOR1Q9UHB4 597 aa15.82■□□□□ 0.12
SCAMP4-203ENST00000411971 GPN3Q9UHW5 284 aaPredicted RBP15.82■□□□□ 0.12
SCAMP4-203ENST00000411971 SRPK3Q9UPE1 567 aa15.82■□□□□ 0.12
SCAMP4-203ENST00000411971 ITPR2Q14571 2701 aa15.82■□□□□ 0.12
SCAMP4-203ENST00000411971 CROCCQ5TZA2 2017 aa15.82■□□□□ 0.12
SCAMP4-203ENST00000411971 ZGRF1Q86YA3 2104 aa15.82■□□□□ 0.12
SCAMP4-203ENST00000411971 LOC105369274A0A096LPK9 316 aa15.81■□□□□ 0.12
SCAMP4-203ENST00000411971 LOC102723532A0A0G2JNH3 316 aa15.81■□□□□ 0.12
SCAMP4-203ENST00000411971 A1L4Q6 167 aa15.81■□□□□ 0.12
SCAMP4-203ENST00000411971 PRMT5O14744 637 aaPredicted RBP15.81■□□□□ 0.12
SCAMP4-203ENST00000411971 SVILO95425 2214 aa15.81■□□□□ 0.12
SCAMP4-203ENST00000411971 CBX6O95503 412 aa15.81■□□□□ 0.12
SCAMP4-203ENST00000411971 C1orf105O95561 183 aa15.81■□□□□ 0.12
SCAMP4-203ENST00000411971 ONECUT2O95948 504 aa15.81■□□□□ 0.12
SCAMP4-203ENST00000411971 CDC25BP30305 580 aa15.81■□□□□ 0.12
SCAMP4-203ENST00000411971 OR1D4P47884 311 aa15.81■□□□□ 0.12
SCAMP4-203ENST00000411971 SNRPNP63162 240 aaKnown RBP15.81■□□□□ 0.12
SCAMP4-203ENST00000411971 Q0VFX4 171 aa15.81■□□□□ 0.12
SCAMP4-203ENST00000411971 NR6A1Q15406 480 aa15.81■□□□□ 0.12
SCAMP4-203ENST00000411971 NKG7Q16617 165 aa15.81■□□□□ 0.12
SCAMP4-203ENST00000411971 UNC5DQ6UXZ4 953 aa15.81■□□□□ 0.12
SCAMP4-203ENST00000411971 CUZD1Q86UP6 607 aa15.81■□□□□ 0.12
SCAMP4-203ENST00000411971 OR4N4Q8N0Y3 316 aa15.81■□□□□ 0.12
SCAMP4-203ENST00000411971 PPHLN1Q8NEY8 458 aaKnown RBP15.81■□□□□ 0.12
SCAMP4-203ENST00000411971 ASZ1Q8WWH4 475 aa15.81■□□□□ 0.12
SCAMP4-203ENST00000411971 FAM136AQ96C01 138 aa15.81■□□□□ 0.12
SCAMP4-203ENST00000411971 MFSD3Q96ES6 412 aa15.81■□□□□ 0.12
SCAMP4-203ENST00000411971 CELSR2Q9HCU4 2923 aa15.81■□□□□ 0.12
SCAMP4-203ENST00000411971 SYBUQ9NX95 663 aa15.81■□□□□ 0.12
SCAMP4-203ENST00000411971 PAK5Q9P286 719 aa15.81■□□□□ 0.12
SCAMP4-203ENST00000411971 C5AR2Q9P296 337 aa15.81■□□□□ 0.12
SCAMP4-203ENST00000411971 MAP10Q9P2G4 905 aa15.81■□□□□ 0.12
SCAMP4-203ENST00000411971 HS3ST3B1Q9Y662 390 aa15.81■□□□□ 0.12
SCAMP4-203ENST00000411971 POLEQ07864 2286 aa15.8■□□□□ 0.12
SCAMP4-203ENST00000411971 CENPEQ02224 2701 aa15.8■□□□□ 0.12
SCAMP4-203ENST00000411971 A0A1B0GX78 115 aa15.8■□□□□ 0.12
SCAMP4-203ENST00000411971 NIPSNAP2O75323 286 aa15.8■□□□□ 0.12
SCAMP4-203ENST00000411971 APOA4P06727 396 aa15.8■□□□□ 0.12
SCAMP4-203ENST00000411971 MGAT1P26572 445 aa15.8■□□□□ 0.12
SCAMP4-203ENST00000411971 COL8A1P27658 744 aa15.8■□□□□ 0.12
SCAMP4-203ENST00000411971 TERF1P54274 439 aa15.8■□□□□ 0.12
SCAMP4-203ENST00000411971 SOX8P57073 446 aa15.8■□□□□ 0.12
SCAMP4-203ENST00000411971 GBX1Q14549 363 aa15.8■□□□□ 0.12
SCAMP4-203ENST00000411971 SF1Q15637 639 aaKnown RBP15.8■□□□□ 0.12
SCAMP4-203ENST00000411971 HIF1AQ16665 826 aa15.8■□□□□ 0.12
SCAMP4-203ENST00000411971 C4orf17Q53FE4 359 aa15.8■□□□□ 0.12
SCAMP4-203ENST00000411971 KIRREL2Q6UWL6 708 aa15.8■□□□□ 0.12
SCAMP4-203ENST00000411971 IGFL3Q6UXB1 125 aa15.8■□□□□ 0.12
SCAMP4-203ENST00000411971 OVCH1Q7RTY7 1134 aa15.8■□□□□ 0.12
SCAMP4-203ENST00000411971 LURAP1LQ8IV03 231 aa15.8■□□□□ 0.12
SCAMP4-203ENST00000411971 MPP5Q8N3R9 675 aa15.8■□□□□ 0.12
SCAMP4-203ENST00000411971 OR2A1Q8NGT9 310 aa15.8■□□□□ 0.12
SCAMP4-203ENST00000411971 PRR7Q8TB68 274 aa15.8■□□□□ 0.12
SCAMP4-203ENST00000411971 SSC4DQ8WTU2 575 aa15.8■□□□□ 0.12
SCAMP4-203ENST00000411971 PEX13Q92968 403 aa15.8■□□□□ 0.12
SCAMP4-203ENST00000411971 MIPEPQ99797 713 aa15.8■□□□□ 0.12
SCAMP4-203ENST00000411971 FRMD8P1Q9BZ68 369 aaPredicted RBP15.8■□□□□ 0.12
SCAMP4-203ENST00000411971 SOX17Q9H6I2 414 aaPredicted RBP15.8■□□□□ 0.12
SCAMP4-203ENST00000411971 CUTCQ9NTM9 273 aa15.8■□□□□ 0.12
SCAMP4-203ENST00000411971 IL1RAPL1Q9NZN1 696 aa15.8■□□□□ 0.12
SCAMP4-203ENST00000411971 ERRFI1Q9UJM3 462 aaPredicted RBP15.8■□□□□ 0.12
SCAMP4-203ENST00000411971 FBXL4Q9UKA2 621 aa15.8■□□□□ 0.12
SCAMP4-203ENST00000411971 TTC7AQ9ULT0 858 aaPredicted RBP15.8■□□□□ 0.12
SCAMP4-203ENST00000411971 B3GNT3Q9Y2A9 372 aa15.8■□□□□ 0.12
SCAMP4-203ENST00000411971 MAU2Q9Y6X3 613 aa15.8■□□□□ 0.12
SCAMP4-203ENST00000411971 NOTCH2Q04721 2471 aa15.8■□□□□ 0.12
SCAMP4-203ENST00000411971 AGPSO00116 658 aa15.79■□□□□ 0.12
SCAMP4-203ENST00000411971 DSCR3O14972 297 aa15.79■□□□□ 0.12
SCAMP4-203ENST00000411971 S1PR4O95977 384 aa15.79■□□□□ 0.12
SCAMP4-203ENST00000411971 GAS8O95995 478 aa15.79■□□□□ 0.12
SCAMP4-203ENST00000411971 RPS3P23396 243 aaKnown RBP eCLIP15.79■□□□□ 0.122e-7■□□□□ 10.7
SCAMP4-203ENST00000411971 EIF3BP55884 814 aaKnown RBP15.79■□□□□ 0.12
SCAMP4-203ENST00000411971 VSX2P58304 361 aaPredicted RBP15.79■□□□□ 0.12
SCAMP4-203ENST00000411971 CCNG2Q16589 344 aa15.79■□□□□ 0.12
SCAMP4-203ENST00000411971 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.79■□□□□ 0.12
SCAMP4-203ENST00000411971 PTRHD1Q6GMV3 140 aaKnown RBP15.79■□□□□ 0.12
SCAMP4-203ENST00000411971 CNSTQ6PJW8 725 aa15.79■□□□□ 0.12
SCAMP4-203ENST00000411971 Q6ZS92 163 aa15.79■□□□□ 0.12
SCAMP4-203ENST00000411971 NLRP9Q7RTR0 991 aa15.79■□□□□ 0.12
SCAMP4-203ENST00000411971 SHISA5Q8N114 240 aa15.79■□□□□ 0.12
SCAMP4-203ENST00000411971 CCDC89Q8N998 374 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms