RNA–Protein interactions for RNA: ENST00000411900.5

PKP4-203, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-203ENST00000411900 HOMER3Q9NSC5 361 aa9.68□□□□□ -0.86
PKP4-203ENST00000411900 GALPQ9UBC7 116 aa9.68□□□□□ -0.86
PKP4-203ENST00000411900 GPN3Q9UHW5 284 aaPredicted RBP9.68□□□□□ -0.86
PKP4-203ENST00000411900 DMGDHQ9UI17 866 aaKnown RBP9.68□□□□□ -0.86
PKP4-203ENST00000411900 ANAPC2Q9UJX6 822 aa9.68□□□□□ -0.86
PKP4-203ENST00000411900 SLC39A10Q9ULF5 831 aa9.68□□□□□ -0.86
PKP4-203ENST00000411900 SOX13Q9UN79 622 aa9.68□□□□□ -0.86
PKP4-203ENST00000411900 SEC16AO15027 2179 aa9.68□□□□□ -0.86
PKP4-203ENST00000411900 PCM1Q15154 2024 aa9.67□□□□□ -0.86
PKP4-203ENST00000411900 C9J4A7 227 aa9.67□□□□□ -0.86
PKP4-203ENST00000411900 H3BMH7 237 aa9.67□□□□□ -0.86
PKP4-203ENST00000411900 AP3B1O00203 1094 aa9.67□□□□□ -0.86
PKP4-203ENST00000411900 RASGRF2O14827 1237 aa9.67□□□□□ -0.86
PKP4-203ENST00000411900 ZSCAN9O15535 394 aaPredicted RBP9.67□□□□□ -0.86
PKP4-203ENST00000411900 RAD51CO43502 376 aa9.67□□□□□ -0.86
PKP4-203ENST00000411900 C1orf105O95561 183 aa9.67□□□□□ -0.86
PKP4-203ENST00000411900 RPN2P04844 631 aa9.67□□□□□ -0.86
PKP4-203ENST00000411900 HBQ1P09105 142 aa9.67□□□□□ -0.86
PKP4-203ENST00000411900 H2AFXP16104 143 aaPredicted RBP9.67□□□□□ -0.86
PKP4-203ENST00000411900 CHRM3P20309 590 aa9.67□□□□□ -0.86
PKP4-203ENST00000411900 CD9P21926 228 aa9.67□□□□□ -0.86
PKP4-203ENST00000411900 RPS3P23396 243 aaKnown RBP eCLIP9.67□□□□□ -0.86
PKP4-203ENST00000411900 MCM3P25205 808 aa9.67□□□□□ -0.86
PKP4-203ENST00000411900 PSMB5P28074 263 aa9.67□□□□□ -0.86
PKP4-203ENST00000411900 COILP38432 576 aaPredicted RBP9.67□□□□□ -0.86
PKP4-203ENST00000411900 FNTAP49354 379 aa9.67□□□□□ -0.86
PKP4-203ENST00000411900 MLLT10P55197 1068 aa9.67□□□□□ -0.86
PKP4-203ENST00000411900 RAPSNQ13702 412 aa9.67□□□□□ -0.86
PKP4-203ENST00000411900 ATP1A4Q13733 1029 aa9.67□□□□□ -0.86
PKP4-203ENST00000411900 SF1Q15637 639 aaKnown RBP9.67□□□□□ -0.86
PKP4-203ENST00000411900 ZNF385CQ66K41 422 aaPredicted RBP9.67□□□□□ -0.86
PKP4-203ENST00000411900 MRNIPQ6NTE8 343 aa9.67□□□□□ -0.86
PKP4-203ENST00000411900 TCTN3Q6NUS6 607 aa9.67□□□□□ -0.86
PKP4-203ENST00000411900 UNC5DQ6UXZ4 953 aa9.67□□□□□ -0.86
PKP4-203ENST00000411900 SDCCAG8Q86SQ7 713 aaPredicted RBP9.67□□□□□ -0.86
PKP4-203ENST00000411900 CAND1Q86VP6 1230 aaKnown RBP9.67□□□□□ -0.86
PKP4-203ENST00000411900 ZBTB2Q8N680 514 aa9.67□□□□□ -0.86
PKP4-203ENST00000411900 OR2L8Q8NGY9 312 aa9.67□□□□□ -0.86
PKP4-203ENST00000411900 ADAMTS17Q8TE56 1095 aa9.67□□□□□ -0.86
PKP4-203ENST00000411900 LPGAT1Q92604 370 aa9.67□□□□□ -0.86
PKP4-203ENST00000411900 ZNF669Q96BR6 464 aaPredicted RBP9.67□□□□□ -0.86
PKP4-203ENST00000411900 BIRC8Q96P09 236 aa9.67□□□□□ -0.86
PKP4-203ENST00000411900 SLC25A23Q9BV35 468 aa9.67□□□□□ -0.86
PKP4-203ENST00000411900 PARD6BQ9BYG5 372 aa9.67□□□□□ -0.86
PKP4-203ENST00000411900 MRM3Q9HC36 420 aaKnown RBP9.67□□□□□ -0.86
PKP4-203ENST00000411900 TXLNGQ9NUQ3 528 aa9.67□□□□□ -0.86
PKP4-203ENST00000411900 EURLQ9NYK6 297 aa9.67□□□□□ -0.86
PKP4-203ENST00000411900 PLCL2Q9UPR0 1127 aa9.67□□□□□ -0.86
PKP4-203ENST00000411900 PLAAQ9Y263 795 aa9.67□□□□□ -0.86
PKP4-203ENST00000411900 PTRH2Q9Y3E5 179 aaKnown RBP9.67□□□□□ -0.86
PKP4-203ENST00000411900 NEU2Q9Y3R4 380 aa9.67□□□□□ -0.86
PKP4-203ENST00000411900 SETXQ7Z333 2677 aaKnown RBP9.66□□□□□ -0.86
PKP4-203ENST00000411900 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.66□□□□□ -0.86
PKP4-203ENST00000411900 MASP2O00187 686 aa9.66□□□□□ -0.86
PKP4-203ENST00000411900 NRP2O60462 931 aa9.66□□□□□ -0.86
PKP4-203ENST00000411900 TUBBP07437 444 aa9.66□□□□□ -0.86
PKP4-203ENST00000411900 RHOXF2BP0C7M4 288 aa9.66□□□□□ -0.86
PKP4-203ENST00000411900 ALAS2P22557 587 aa9.66□□□□□ -0.86
PKP4-203ENST00000411900 TNFRSF8P28908 595 aa9.66□□□□□ -0.86
PKP4-203ENST00000411900 PGDP52209 483 aa9.66□□□□□ -0.86
PKP4-203ENST00000411900 SARNPP82979 210 aaKnown RBP9.66□□□□□ -0.86
PKP4-203ENST00000411900 CDK16Q00536 496 aa9.66□□□□□ -0.86
PKP4-203ENST00000411900 TSTA3Q13630 321 aaPredicted RBP9.66□□□□□ -0.86
PKP4-203ENST00000411900 DHX34Q14147 1143 aaKnown RBP9.66□□□□□ -0.86
PKP4-203ENST00000411900 FASTKQ14296 549 aaKnown RBP9.66□□□□□ -0.86
PKP4-203ENST00000411900 TYSND1Q2T9J0 566 aa9.66□□□□□ -0.86
PKP4-203ENST00000411900 NADK2Q4G0N4 442 aa9.66□□□□□ -0.86
PKP4-203ENST00000411900 FCRL6Q6DN72 434 aa9.66□□□□□ -0.86
PKP4-203ENST00000411900 KIAA0930Q6ICG6 404 aaPredicted RBP9.66□□□□□ -0.86
PKP4-203ENST00000411900 TTC23LQ6PF05 361 aa9.66□□□□□ -0.86
PKP4-203ENST00000411900 CCDC137Q6PK04 289 aaKnown RBP9.66□□□□□ -0.86
PKP4-203ENST00000411900 FIGLAQ6QHK4 219 aa9.66□□□□□ -0.86
PKP4-203ENST00000411900 CENPUQ71F23 418 aa9.66□□□□□ -0.86
PKP4-203ENST00000411900 LRRC6Q86X45 466 aa9.66□□□□□ -0.86
PKP4-203ENST00000411900 MCATQ8IVS2 390 aaKnown RBP9.66□□□□□ -0.86
PKP4-203ENST00000411900 DTWD1Q8N5C7 304 aa9.66□□□□□ -0.86
PKP4-203ENST00000411900 METTL27Q8N6F8 245 aaPredicted RBP9.66□□□□□ -0.86
PKP4-203ENST00000411900 FDCSPQ8NFU4 85 aa9.66□□□□□ -0.86
PKP4-203ENST00000411900 DENND1AQ8TEH3 1009 aa9.66□□□□□ -0.86
PKP4-203ENST00000411900 RUNDC3BQ96NL0 473 aa9.66□□□□□ -0.86
PKP4-203ENST00000411900 GBP5Q96PP8 586 aa9.66□□□□□ -0.86
PKP4-203ENST00000411900 MIPEPQ99797 713 aa9.66□□□□□ -0.86
PKP4-203ENST00000411900 RHOXF2Q9BQY4 288 aa9.66□□□□□ -0.86
PKP4-203ENST00000411900 NDC1Q9BTX1 674 aa9.66□□□□□ -0.86
PKP4-203ENST00000411900 FBXO6Q9NRD1 293 aaPredicted RBP9.66□□□□□ -0.86
PKP4-203ENST00000411900 LUZP4Q9P127 313 aa9.66□□□□□ -0.86
PKP4-203ENST00000411900 SAMD15Q9P1V8 674 aa9.66□□□□□ -0.86
PKP4-203ENST00000411900 IFT80Q9P2H3 777 aaPredicted RBP9.66□□□□□ -0.86
PKP4-203ENST00000411900 NDOR1Q9UHB4 597 aa9.66□□□□□ -0.86
PKP4-203ENST00000411900 PADI2Q9Y2J8 665 aa9.66□□□□□ -0.86
PKP4-203ENST00000411900 AP1M2Q9Y6Q5 423 aa9.66□□□□□ -0.86
PKP4-203ENST00000411900 NUP210LQ5VU65 1888 aa9.66□□□□□ -0.86
PKP4-203ENST00000411900 ANKRD12Q6UB98 2062 aa9.65□□□□□ -0.86
PKP4-203ENST00000411900 ASH1LQ9NR48 2969 aaKnown RBP9.65□□□□□ -0.86
PKP4-203ENST00000411900 GOLGA6L10A0A0M3HER8 536 aa9.65□□□□□ -0.86
PKP4-203ENST00000411900 FAM187AA6NFU0 413 aa9.65□□□□□ -0.86
PKP4-203ENST00000411900 E5RI56 91 aa9.65□□□□□ -0.86
PKP4-203ENST00000411900 KPNA5O15131 536 aa9.65□□□□□ -0.86
PKP4-203ENST00000411900 CNOT3O75175 753 aaKnown RBP9.65□□□□□ -0.86
PKP4-203ENST00000411900 KLF7O75840 302 aaPredicted RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms