RNA–Protein interactions for RNA: ENST00000410457.1

RNU2-28P-201, Transcript of RNA, U2 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU2-28P, Length 189 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-28P-201ENST00000410457 SLCO1C1Q9NYB5 712 aa3.79□□□□□ -1.8
RNU2-28P-201ENST00000410457 WDR83OSQ9Y284 106 aa3.79□□□□□ -1.8
RNU2-28P-201ENST00000410457 IGLV5-45A0A087WSX0 123 aa3.78□□□□□ -1.8
RNU2-28P-201ENST00000410457 SAA2-SAA4A0A096LPE2 208 aa3.78□□□□□ -1.8
RNU2-28P-201ENST00000410457 BICDL2A1A5D9 508 aa3.78□□□□□ -1.8
RNU2-28P-201ENST00000410457 DDX39AO00148 427 aaKnown RBP3.78□□□□□ -1.8
RNU2-28P-201ENST00000410457 FLRT2O43155 660 aa3.78□□□□□ -1.8
RNU2-28P-201ENST00000410457 ST8SIA3O43173 380 aa3.78□□□□□ -1.8
RNU2-28P-201ENST00000410457 PPIP5K2O43314 1243 aa3.78□□□□□ -1.8
RNU2-28P-201ENST00000410457 RPS6KA5O75582 802 aa3.78□□□□□ -1.8
RNU2-28P-201ENST00000410457 ZBTB11O95625 1053 aaPredicted RBP3.78□□□□□ -1.8
RNU2-28P-201ENST00000410457 PPP1R3DO95685 299 aa3.78□□□□□ -1.8
RNU2-28P-201ENST00000410457 SLC16A8O95907 504 aa3.78□□□□□ -1.8
RNU2-28P-201ENST00000410457 GSRP00390 522 aa3.78□□□□□ -1.8
RNU2-28P-201ENST00000410457 PLGP00747 810 aaPredicted RBP3.78□□□□□ -1.8
RNU2-28P-201ENST00000410457 EPORP19235 508 aa3.78□□□□□ -1.8
RNU2-28P-201ENST00000410457 ITIH1P19827 911 aa3.78□□□□□ -1.8
RNU2-28P-201ENST00000410457 TNFRSF8P28908 595 aa3.78□□□□□ -1.8
RNU2-28P-201ENST00000410457 CDKN2AP42771 156 aaKnown RBP3.78□□□□□ -1.8
RNU2-28P-201ENST00000410457 KCNJ1P48048 391 aa3.78□□□□□ -1.8
RNU2-28P-201ENST00000410457 RGS19P49795 217 aa3.78□□□□□ -1.8
RNU2-28P-201ENST00000410457 HTR6P50406 440 aa3.78□□□□□ -1.8
RNU2-28P-201ENST00000410457 ART1P52961 327 aa3.78□□□□□ -1.8
RNU2-28P-201ENST00000410457 KLC1Q07866 573 aa3.78□□□□□ -1.8
RNU2-28P-201ENST00000410457 ZNF415Q09FC8 603 aa3.78□□□□□ -1.8
RNU2-28P-201ENST00000410457 ILF2Q12905 390 aaKnown RBP3.78□□□□□ -1.8
RNU2-28P-201ENST00000410457 ODF4Q2M2E3 257 aa3.78□□□□□ -1.8
RNU2-28P-201ENST00000410457 CTU2Q2VPK5 515 aaKnown RBP3.78□□□□□ -1.8
RNU2-28P-201ENST00000410457 SIRPB2Q5JXA9 342 aa3.78□□□□□ -1.8
RNU2-28P-201ENST00000410457 C9orf57Q5W0N0 161 aa3.78□□□□□ -1.8
RNU2-28P-201ENST00000410457 C16orf82Q7Z2V1 217 aa3.78□□□□□ -1.8
RNU2-28P-201ENST00000410457 ZNF554Q86TJ5 538 aa3.78□□□□□ -1.8
RNU2-28P-201ENST00000410457 PLD3Q8IV08 490 aa3.78□□□□□ -1.8
RNU2-28P-201ENST00000410457 FOXP4Q8IVH2 680 aaPredicted RBP3.78□□□□□ -1.8
RNU2-28P-201ENST00000410457 NDUFAF2Q8N183 169 aa3.78□□□□□ -1.8
RNU2-28P-201ENST00000410457 CHCHD4Q8N4Q1 142 aa3.78□□□□□ -1.8
RNU2-28P-201ENST00000410457 AMER3Q8N944 861 aa3.78□□□□□ -1.8
RNU2-28P-201ENST00000410457 OR2T12Q8NG77 320 aa3.78□□□□□ -1.8
RNU2-28P-201ENST00000410457 ZNF473Q8WTR7 871 aaKnown RBP3.78□□□□□ -1.8
RNU2-28P-201ENST00000410457 SORCS1Q8WY21 1168 aa3.78□□□□□ -1.8
RNU2-28P-201ENST00000410457 SEPT1Q8WYJ6 367 aa3.78□□□□□ -1.8
RNU2-28P-201ENST00000410457 SCRN2Q96FV2 425 aa3.78□□□□□ -1.8
RNU2-28P-201ENST00000410457 THOC1Q96FV9 657 aaKnown RBP3.78□□□□□ -1.8
RNU2-28P-201ENST00000410457 BSCL2Q96G97 398 aaPredicted RBP3.78□□□□□ -1.8
RNU2-28P-201ENST00000410457 PDLIM5Q96HC4 596 aaKnown RBP3.78□□□□□ -1.8
RNU2-28P-201ENST00000410457 FAM71F1Q96KD3 344 aaPredicted RBP3.78□□□□□ -1.8
RNU2-28P-201ENST00000410457 IL17FQ96PD4 163 aa3.78□□□□□ -1.8
RNU2-28P-201ENST00000410457 DUX5Q96PT3 197 aa3.78□□□□□ -1.8
RNU2-28P-201ENST00000410457 HNRNPABQ99729 332 aaKnown RBP3.78□□□□□ -1.8
RNU2-28P-201ENST00000410457 RTP3Q9BQQ7 232 aa3.78□□□□□ -1.8
RNU2-28P-201ENST00000410457 DDX31Q9H8H2 851 aaKnown RBP3.78□□□□□ -1.8
RNU2-28P-201ENST00000410457 MID1IP1Q9NPA3 183 aa3.78□□□□□ -1.8
RNU2-28P-201ENST00000410457 IARS2Q9NSE4 1012 aaKnown RBP3.78□□□□□ -1.8
RNU2-28P-201ENST00000410457 CWC25Q9NXE8 425 aaPredicted RBP3.78□□□□□ -1.8
RNU2-28P-201ENST00000410457 ZDHHC2Q9UIJ5 367 aa3.78□□□□□ -1.8
RNU2-28P-201ENST00000410457 DAPK2Q9UIK4 370 aa3.78□□□□□ -1.8
RNU2-28P-201ENST00000410457 JRKLQ9Y4A0 524 aa3.78□□□□□ -1.8
RNU2-28P-201ENST00000410457 PCSK5Q92824 1860 aa3.77□□□□□ -1.81
RNU2-28P-201ENST00000410457 DOCK7Q96N67 2140 aa3.77□□□□□ -1.81
RNU2-28P-201ENST00000410457 HEG1Q9ULI3 1381 aa3.77□□□□□ -1.81
RNU2-28P-201ENST00000410457 LACTBL1A8MY62 500 aa3.77□□□□□ -1.81
RNU2-28P-201ENST00000410457 INO80B-WBP1J3KQ70 363 aa3.77□□□□□ -1.81
RNU2-28P-201ENST00000410457 TULP2O00295 520 aa3.77□□□□□ -1.81
RNU2-28P-201ENST00000410457 O00370 1275 aa3.77□□□□□ -1.81
RNU2-28P-201ENST00000410457 ARPC2O15144 300 aa3.77□□□□□ -1.81
RNU2-28P-201ENST00000410457 SMAD6O43541 496 aaKnown RBP3.77□□□□□ -1.81
RNU2-28P-201ENST00000410457 SNX3O60493 162 aa3.77□□□□□ -1.81
RNU2-28P-201ENST00000410457 KINO60870 393 aaKnown RBP3.77□□□□□ -1.81
RNU2-28P-201ENST00000410457 SLC22A3O75751 556 aa3.77□□□□□ -1.81
RNU2-28P-201ENST00000410457 PNPP00491 289 aa3.77□□□□□ -1.81
RNU2-28P-201ENST00000410457 GH1P01241 217 aa3.77□□□□□ -1.81
RNU2-28P-201ENST00000410457 ALPLP05186 524 aa3.77□□□□□ -1.81
RNU2-28P-201ENST00000410457 TGFB3P10600 412 aa3.77□□□□□ -1.81
RNU2-28P-201ENST00000410457 FGF5P12034 268 aa3.77□□□□□ -1.81
RNU2-28P-201ENST00000410457 LBPP18428 481 aa3.77□□□□□ -1.81
RNU2-28P-201ENST00000410457 HLA-DPA1P20036 260 aa3.77□□□□□ -1.81
RNU2-28P-201ENST00000410457 PSMB4P28070 264 aa3.77□□□□□ -1.81
RNU2-28P-201ENST00000410457 IER3P46695 156 aa3.77□□□□□ -1.81
RNU2-28P-201ENST00000410457 GSDMDP57764 484 aa3.77□□□□□ -1.81
RNU2-28P-201ENST00000410457 ACTN3Q08043 901 aaPredicted RBP3.77□□□□□ -1.81
RNU2-28P-201ENST00000410457 DMPKQ09013 629 aa3.77□□□□□ -1.81
RNU2-28P-201ENST00000410457 C17orf67Q0P5P2 114 aa3.77□□□□□ -1.81
RNU2-28P-201ENST00000410457 TEFQ10587 303 aa3.77□□□□□ -1.81
RNU2-28P-201ENST00000410457 PHKG1Q16816 387 aa3.77□□□□□ -1.81
RNU2-28P-201ENST00000410457 ITPRIPL2Q3MIP1 535 aa3.77□□□□□ -1.81
RNU2-28P-201ENST00000410457 CCDC158Q5M9N0 1113 aa3.77□□□□□ -1.81
RNU2-28P-201ENST00000410457 SPDYCQ5MJ68 293 aa3.77□□□□□ -1.81
RNU2-28P-201ENST00000410457 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.77□□□□□ -1.81
RNU2-28P-201ENST00000410457 PDSS1Q5T2R2 415 aa3.77□□□□□ -1.81
RNU2-28P-201ENST00000410457 SUSD4Q5VX71 490 aa3.77□□□□□ -1.81
RNU2-28P-201ENST00000410457 CORO6Q6QEF8 472 aa3.77□□□□□ -1.81
RNU2-28P-201ENST00000410457 KCTD8Q6ZWB6 473 aa3.77□□□□□ -1.81
RNU2-28P-201ENST00000410457 AMIGO1Q86WK6 493 aa3.77□□□□□ -1.81
RNU2-28P-201ENST00000410457 MMD2Q8IY49 270 aa3.77□□□□□ -1.81
RNU2-28P-201ENST00000410457 NAGSQ8N159 534 aa3.77□□□□□ -1.81
RNU2-28P-201ENST00000410457 OR4K1Q8NGD4 311 aa3.77□□□□□ -1.81
RNU2-28P-201ENST00000410457 MGARPQ8TDB4 240 aa3.77□□□□□ -1.81
RNU2-28P-201ENST00000410457 GRHL3Q8TE85 626 aa3.77□□□□□ -1.81
RNU2-28P-201ENST00000410457 SECTM1Q8WVN6 248 aa3.77□□□□□ -1.81
RNU2-28P-201ENST00000410457 HSD17B8Q92506 261 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms