RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 CYP2A13Q16696 494 aa14.16□□□□□ -0.14
CBX3-203ENST00000409747 LRRC8BQ6P9F7 803 aa14.16□□□□□ -0.14
CBX3-203ENST00000409747 TTC29Q8NA56 475 aaPredicted RBP14.16□□□□□ -0.14
CBX3-203ENST00000409747 TM9SF4Q92544 642 aa14.16□□□□□ -0.14
CBX3-203ENST00000409747 ZUFSPQ96AP4 578 aa14.16□□□□□ -0.14
CBX3-203ENST00000409747 IL17FQ96PD4 163 aa14.16□□□□□ -0.14
CBX3-203ENST00000409747 SLC29A3Q9BZD2 475 aa14.16□□□□□ -0.14
CBX3-203ENST00000409747 TTC7AQ9ULT0 858 aaPredicted RBP14.16□□□□□ -0.14
CBX3-203ENST00000409747 FAM169AQ9Y6X4 670 aa14.16□□□□□ -0.14
CBX3-203ENST00000409747 SNRNP200O75643 2136 aaKnown RBP14.16□□□□□ -0.14
CBX3-203ENST00000409747 SEC16AO15027 2179 aa14.16□□□□□ -0.14
CBX3-203ENST00000409747 TARM1B6A8C7 271 aa14.15□□□□□ -0.14
CBX3-203ENST00000409747 NRDCO43847 1150 aa14.15□□□□□ -0.14
CBX3-203ENST00000409747 C1orf105O95561 183 aa14.15□□□□□ -0.14
CBX3-203ENST00000409747 ALBP02768 609 aa14.15□□□□□ -0.14
CBX3-203ENST00000409747 CTSBP07858 339 aa14.15□□□□□ -0.14
CBX3-203ENST00000409747 PAMP19021 973 aa14.15□□□□□ -0.14
CBX3-203ENST00000409747 MGAT1P26572 445 aa14.15□□□□□ -0.14
CBX3-203ENST00000409747 ATP5DP30049 168 aa14.15□□□□□ -0.14
CBX3-203ENST00000409747 MYBPC3Q14896 1274 aa14.15□□□□□ -0.14
CBX3-203ENST00000409747 SLC6A19Q695T7 634 aa14.15□□□□□ -0.14
CBX3-203ENST00000409747 FIGLAQ6QHK4 219 aa14.15□□□□□ -0.14
CBX3-203ENST00000409747 TTLL10Q6ZVT0 673 aa14.15□□□□□ -0.14
CBX3-203ENST00000409747 FAM20CQ8IXL6 584 aa14.15□□□□□ -0.14
CBX3-203ENST00000409747 GALNT16Q8N428 558 aa14.15□□□□□ -0.14
CBX3-203ENST00000409747 C2orf73Q8N5S3 287 aaPredicted RBP14.15□□□□□ -0.14
CBX3-203ENST00000409747 HMGCLL1Q8TB92 370 aa14.15□□□□□ -0.14
CBX3-203ENST00000409747 TCF12Q99081 682 aa14.15□□□□□ -0.14
CBX3-203ENST00000409747 SELENOSQ9BQE4 189 aa14.15□□□□□ -0.14
CBX3-203ENST00000409747 WDR54Q9H977 334 aa14.15□□□□□ -0.14
CBX3-203ENST00000409747 ENAMQ9NRM1 1142 aa14.15□□□□□ -0.14
CBX3-203ENST00000409747 P4HTMQ9NXG6 502 aa14.15□□□□□ -0.14
CBX3-203ENST00000409747 IL1RAPL1Q9NZN1 696 aa14.15□□□□□ -0.14
CBX3-203ENST00000409747 SPATA7Q9P0W8 599 aa14.15□□□□□ -0.14
CBX3-203ENST00000409747 CIDEBQ9UHD4 219 aa14.15□□□□□ -0.14
CBX3-203ENST00000409747 NXT1Q9UKK6 140 aaKnown RBP14.15□□□□□ -0.14
CBX3-203ENST00000409747 SOX13Q9UN79 622 aa14.15□□□□□ -0.14
CBX3-203ENST00000409747 VPS9D1Q9Y2B5 631 aa14.15□□□□□ -0.14
CBX3-203ENST00000409747 KLHL20Q9Y2M5 609 aa14.15□□□□□ -0.14
CBX3-203ENST00000409747 PRRC2CQ9Y520 2896 aaKnown RBP14.15□□□□□ -0.14
CBX3-203ENST00000409747 DSCR3O14972 297 aa14.15□□□□□ -0.14
CBX3-203ENST00000409747 CEP104O60308 925 aa14.15□□□□□ -0.14
CBX3-203ENST00000409747 VAPBO95292 243 aa14.15□□□□□ -0.14
CBX3-203ENST00000409747 ESR1P03372 595 aa14.15□□□□□ -0.14
CBX3-203ENST00000409747 GP1BBP13224 206 aa14.15□□□□□ -0.14
CBX3-203ENST00000409747 GCGRP47871 477 aa14.15□□□□□ -0.14
CBX3-203ENST00000409747 ADARP55265 1226 aaKnown RBP14.15□□□□□ -0.14
CBX3-203ENST00000409747 INPP5JQ15735 1006 aaPredicted RBP14.15□□□□□ -0.14
CBX3-203ENST00000409747 TYSND1Q2T9J0 566 aa14.15□□□□□ -0.14
CBX3-203ENST00000409747 FHL5Q5TD97 284 aa14.15□□□□□ -0.14
CBX3-203ENST00000409747 LMNTD1Q8N9Z9 388 aa14.15□□□□□ -0.14
CBX3-203ENST00000409747 MFSD3Q96ES6 412 aa14.15□□□□□ -0.14
CBX3-203ENST00000409747 VPS50Q96JG6 964 aa14.15□□□□□ -0.14
CBX3-203ENST00000409747 CUTCQ9NTM9 273 aa14.15□□□□□ -0.14
CBX3-203ENST00000409747 SYBUQ9NX95 663 aa14.15□□□□□ -0.14
CBX3-203ENST00000409747 KLK4Q9Y5K2 254 aa14.15□□□□□ -0.14
CBX3-203ENST00000409747 AGPSO00116 658 aa14.14□□□□□ -0.15
CBX3-203ENST00000409747 SRPX2O60687 465 aaPredicted RBP14.14□□□□□ -0.15
CBX3-203ENST00000409747 ONECUT2O95948 504 aa14.14□□□□□ -0.15
CBX3-203ENST00000409747 UMODP07911 640 aa14.14□□□□□ -0.15
CBX3-203ENST00000409747 ATXN8OSP0DMR3 200 aa14.14□□□□□ -0.15
CBX3-203ENST00000409747 OGNP20774 298 aaKnown RBP14.14□□□□□ -0.15
CBX3-203ENST00000409747 GNLYP22749 145 aa14.14□□□□□ -0.15
CBX3-203ENST00000409747 BDKRB1P46663 353 aa14.14□□□□□ -0.15
CBX3-203ENST00000409747 KCNJ1P48048 391 aa14.14□□□□□ -0.15
CBX3-203ENST00000409747 RAPSNQ13702 412 aa14.14□□□□□ -0.15
CBX3-203ENST00000409747 FAM214AQ32MH5 1076 aa14.14□□□□□ -0.15
CBX3-203ENST00000409747 CTSL3PQ5NE16 218 aa14.14□□□□□ -0.15
CBX3-203ENST00000409747 FCRL6Q6DN72 434 aa14.14□□□□□ -0.15
CBX3-203ENST00000409747 KIAA0930Q6ICG6 404 aaPredicted RBP14.14□□□□□ -0.15
CBX3-203ENST00000409747 CNSTQ6PJW8 725 aa14.14□□□□□ -0.15
CBX3-203ENST00000409747 OVCH1Q7RTY7 1134 aa14.14□□□□□ -0.15
CBX3-203ENST00000409747 PPP1R32Q7Z5V6 425 aa14.14□□□□□ -0.15
CBX3-203ENST00000409747 RBMXL3Q8N7X1 1067 aaKnown RBP14.14□□□□□ -0.15
CBX3-203ENST00000409747 LPGAT1Q92604 370 aa14.14□□□□□ -0.15
CBX3-203ENST00000409747 ZNF285Q96NJ3 590 aa14.14□□□□□ -0.15
CBX3-203ENST00000409747 MFRPQ9BY79 579 aa14.14□□□□□ -0.15
CBX3-203ENST00000409747 SLC26A1Q9H2B4 701 aa14.14□□□□□ -0.15
CBX3-203ENST00000409747 ATP13A2Q9NQ11 1180 aa14.14□□□□□ -0.15
CBX3-203ENST00000409747 SAMD15Q9P1V8 674 aa14.14□□□□□ -0.15
CBX3-203ENST00000409747 NFS1Q9Y697 457 aa14.14□□□□□ -0.15
CBX3-203ENST00000409747 NUP210LQ5VU65 1888 aa14.14□□□□□ -0.15
CBX3-203ENST00000409747 PCSK5Q92824 1860 aa14.14□□□□□ -0.15
CBX3-203ENST00000409747 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.13□□□□□ -0.15
CBX3-203ENST00000409747 PRICKLE3O43900 615 aaPredicted RBP14.13□□□□□ -0.15
CBX3-203ENST00000409747 CNOT3O75175 753 aaKnown RBP14.13□□□□□ -0.15
CBX3-203ENST00000409747 AGFG2O95081 481 aa14.13□□□□□ -0.15
CBX3-203ENST00000409747 MMP11P24347 488 aa14.13□□□□□ -0.15
CBX3-203ENST00000409747 ARNTP27540 789 aa14.13□□□□□ -0.15
CBX3-203ENST00000409747 FMO4P31512 558 aa14.13□□□□□ -0.15
CBX3-203ENST00000409747 GRIA3P42263 894 aa14.13□□□□□ -0.15
CBX3-203ENST00000409747 UQCRFS1P47985 274 aa14.13□□□□□ -0.15
CBX3-203ENST00000409747 SOX8P57073 446 aa14.13□□□□□ -0.15
CBX3-203ENST00000409747 AIMP2Q13155 320 aaKnown RBP14.13□□□□□ -0.15
CBX3-203ENST00000409747 IQCKQ8N0W5 287 aa14.13□□□□□ -0.15
CBX3-203ENST00000409747 Q8NA96 180 aa14.13□□□□□ -0.15
CBX3-203ENST00000409747 OR2L3Q8NG85 312 aa14.13□□□□□ -0.15
CBX3-203ENST00000409747 BIRC8Q96P09 236 aa14.13□□□□□ -0.15
CBX3-203ENST00000409747 MAP10Q9P2G4 905 aa14.13□□□□□ -0.15
CBX3-203ENST00000409747 CDC23Q9UJX2 597 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms