RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 CDKL2Q92772 493 aa30.05■■■□□ 2.4
TRAF3IP1-203ENST00000409739 FCRL4Q96PJ5 515 aa30.05■■■□□ 2.4
TRAF3IP1-203ENST00000409739 PKP4Q99569 1192 aa30.05■■■□□ 2.4
TRAF3IP1-203ENST00000409739 FAM129AQ9BZQ8 928 aa30.05■■■□□ 2.4
TRAF3IP1-203ENST00000409739 RHOJQ9H4E5 214 aa30.05■■■□□ 2.4
TRAF3IP1-203ENST00000409739 FANCEQ9HB96 536 aa30.05■■■□□ 2.4
TRAF3IP1-203ENST00000409739 SYTL2Q9HCH5 934 aa30.05■■■□□ 2.4
TRAF3IP1-203ENST00000409739 LRRC4CQ9HCJ2 640 aa30.05■■■□□ 2.4
TRAF3IP1-203ENST00000409739 FAM60AQ9NP50 221 aa30.05■■■□□ 2.4
TRAF3IP1-203ENST00000409739 LNPEPQ9UIQ6 1025 aa30.05■■■□□ 2.4
TRAF3IP1-203ENST00000409739 CHD6Q8TD26 2715 aa30.05■■■□□ 2.4
TRAF3IP1-203ENST00000409739 ZFYVE26Q68DK2 2539 aa30.04■■■□□ 2.4
TRAF3IP1-203ENST00000409739 MDC1Q14676 2089 aaKnown RBP30.04■■■□□ 2.4
TRAF3IP1-203ENST00000409739 FAM95CA0A1B0GW59 222 aa30.04■■■□□ 2.4
TRAF3IP1-203ENST00000409739 FAM159BA6NKW6 160 aa30.04■■■□□ 2.4
TRAF3IP1-203ENST00000409739 MAP3K7O43318 606 aa30.04■■■□□ 2.4
TRAF3IP1-203ENST00000409739 PSMB5P28074 263 aa30.04■■■□□ 2.4
TRAF3IP1-203ENST00000409739 CXADRP78310 365 aa30.04■■■□□ 2.4
TRAF3IP1-203ENST00000409739 MAP7Q14244 749 aa30.04■■■□□ 2.4
TRAF3IP1-203ENST00000409739 FASTKQ14296 549 aaKnown RBP30.04■■■□□ 2.4
TRAF3IP1-203ENST00000409739 UBE2R2Q712K3 238 aaPredicted RBP30.04■■■□□ 2.4
TRAF3IP1-203ENST00000409739 OR8K5Q8NH50 307 aa30.04■■■□□ 2.4
TRAF3IP1-203ENST00000409739 LINGO1Q96FE5 620 aa30.04■■■□□ 2.4
TRAF3IP1-203ENST00000409739 TCTN2Q96GX1 697 aa30.04■■■□□ 2.4
TRAF3IP1-203ENST00000409739 VPS39Q96JC1 886 aa30.04■■■□□ 2.4
TRAF3IP1-203ENST00000409739 CHRNA10Q9GZZ6 450 aa30.04■■■□□ 2.4
TRAF3IP1-203ENST00000409739 SEC16AO15027 2179 aa30.03■■■□□ 2.4
TRAF3IP1-203ENST00000409739 A0A1W2PPV9 198 aa30.03■■■□□ 2.4
TRAF3IP1-203ENST00000409739 TMEM150CB9EJG8 249 aa30.03■■■□□ 2.4
TRAF3IP1-203ENST00000409739 EFSO43281 561 aa30.03■■■□□ 2.4
TRAF3IP1-203ENST00000409739 TSPAN12O95859 305 aa30.03■■■□□ 2.4
TRAF3IP1-203ENST00000409739 MAGP20916 626 aa30.03■■■□□ 2.4
TRAF3IP1-203ENST00000409739 MAP4P27816 1152 aaKnown RBP30.03■■■□□ 2.4
TRAF3IP1-203ENST00000409739 OAS2P29728 719 aaKnown RBP30.03■■■□□ 2.4
TRAF3IP1-203ENST00000409739 MYO1HQ8N1T3 1032 aa30.03■■■□□ 2.4
TRAF3IP1-203ENST00000409739 GALNT6Q8NCL4 622 aa30.03■■■□□ 2.4
TRAF3IP1-203ENST00000409739 FAM208BQ5VWN6 2430 aa30.03■■■□□ 2.4
TRAF3IP1-203ENST00000409739 ZBTB14O43829 449 aa30.02■■■□□ 2.4
TRAF3IP1-203ENST00000409739 SLC16A8O95907 504 aa30.02■■■□□ 2.4
TRAF3IP1-203ENST00000409739 ARHGAP19Q14CB8 494 aa30.02■■■□□ 2.4
TRAF3IP1-203ENST00000409739 DEFB110Q30KQ9 67 aa30.02■■■□□ 2.4
TRAF3IP1-203ENST00000409739 CCDC81Q6ZN84 652 aa30.02■■■□□ 2.4
TRAF3IP1-203ENST00000409739 OR1L3Q8NH93 324 aa30.02■■■□□ 2.4
TRAF3IP1-203ENST00000409739 DLG3Q92796 817 aa30.02■■■□□ 2.4
TRAF3IP1-203ENST00000409739 MTRF1LQ9UGC7 380 aaKnown RBP30.02■■■□□ 2.4
TRAF3IP1-203ENST00000409739 ADAMTS6Q9UKP5 1117 aa30.02■■■□□ 2.4
TRAF3IP1-203ENST00000409739 KLHL20Q9Y2M5 609 aa30.02■■■□□ 2.4
TRAF3IP1-203ENST00000409739 SYF2O95926 243 aaKnown RBP30.01■■■□□ 2.39
TRAF3IP1-203ENST00000409739 C8GP07360 202 aa30.01■■■□□ 2.39
TRAF3IP1-203ENST00000409739 STX2P32856 288 aa30.01■■■□□ 2.39
TRAF3IP1-203ENST00000409739 GABRA4P48169 554 aa30.01■■■□□ 2.39
TRAF3IP1-203ENST00000409739 IL2P60568 153 aa30.01■■■□□ 2.39
TRAF3IP1-203ENST00000409739 VAC14Q08AM6 782 aa30.01■■■□□ 2.39
TRAF3IP1-203ENST00000409739 SP140Q13342 867 aa30.01■■■□□ 2.39
TRAF3IP1-203ENST00000409739 SF1Q15637 639 aaKnown RBP30.01■■■□□ 2.39
TRAF3IP1-203ENST00000409739 C6orf15Q6UXA7 325 aaPredicted RBP30.01■■■□□ 2.39
TRAF3IP1-203ENST00000409739 TMEM126BQ8IUX1 230 aa30.01■■■□□ 2.39
TRAF3IP1-203ENST00000409739 ESX1Q8N693 406 aa30.01■■■□□ 2.39
TRAF3IP1-203ENST00000409739 CPNE1Q99829 537 aa30.01■■■□□ 2.39
TRAF3IP1-203ENST00000409739 CAMSAP3Q9P1Y5 1249 aaPredicted RBP30.01■■■□□ 2.39
TRAF3IP1-203ENST00000409739 K7ENP7 123 aa30■■■□□ 2.39
TRAF3IP1-203ENST00000409739 HCRTR1O43613 425 aa30■■■□□ 2.39
TRAF3IP1-203ENST00000409739 SCRG1O75711 98 aa30■■■□□ 2.39
TRAF3IP1-203ENST00000409739 FKBP9O95302 570 aa30■■■□□ 2.39
TRAF3IP1-203ENST00000409739 LIFP15018 202 aa30■■■□□ 2.39
TRAF3IP1-203ENST00000409739 WT1P19544 449 aaPredicted RBP30■■■□□ 2.39
TRAF3IP1-203ENST00000409739 SAT1P21673 171 aa30■■■□□ 2.39
TRAF3IP1-203ENST00000409739 ECHS1P30084 290 aa30■■■□□ 2.39
TRAF3IP1-203ENST00000409739 PNLIPRP1P54315 467 aa30■■■□□ 2.39
TRAF3IP1-203ENST00000409739 ABHD18Q0P651 414 aa30■■■□□ 2.39
TRAF3IP1-203ENST00000409739 KBTBD12Q3ZCT8 623 aa30■■■□□ 2.39
TRAF3IP1-203ENST00000409739 ARHGAP40Q5TG30 622 aa30■■■□□ 2.39
TRAF3IP1-203ENST00000409739 KIAA1614Q5VZ46 1190 aa30■■■□□ 2.39
TRAF3IP1-203ENST00000409739 INO80CQ6PI98 192 aaPredicted RBP30■■■□□ 2.39
TRAF3IP1-203ENST00000409739 OR2A1Q8NGT9 310 aa30■■■□□ 2.39
TRAF3IP1-203ENST00000409739 FBF1Q8TES7 1133 aa30■■■□□ 2.39
TRAF3IP1-203ENST00000409739 ZNF480Q8WV37 535 aa30■■■□□ 2.39
TRAF3IP1-203ENST00000409739 IFT81Q8WYA0 676 aa30■■■□□ 2.39
TRAF3IP1-203ENST00000409739 NTRK1P04629 796 aa29.99■■■□□ 2.39
TRAF3IP1-203ENST00000409739 ZNF37AP17032 561 aaPredicted RBP29.99■■■□□ 2.39
TRAF3IP1-203ENST00000409739 HSD17B2P37059 387 aa29.99■■■□□ 2.39
TRAF3IP1-203ENST00000409739 STAT5AP42229 794 aa29.99■■■□□ 2.39
TRAF3IP1-203ENST00000409739 TAS2R39P59534 338 aa29.99■■■□□ 2.39
TRAF3IP1-203ENST00000409739 ILF2Q12905 390 aaKnown RBP29.99■■■□□ 2.39
TRAF3IP1-203ENST00000409739 ZNF460Q14592 562 aa29.99■■■□□ 2.39
TRAF3IP1-203ENST00000409739 PRAMEF17Q5VTA0 474 aa29.99■■■□□ 2.39
TRAF3IP1-203ENST00000409739 SUSD1Q6UWL2 747 aa29.99■■■□□ 2.39
TRAF3IP1-203ENST00000409739 TMEM207Q6UWW9 146 aa29.99■■■□□ 2.39
TRAF3IP1-203ENST00000409739 CTAGE3PQ8IX95 158 aa29.99■■■□□ 2.39
TRAF3IP1-203ENST00000409739 OR2L3Q8NG85 312 aa29.99■■■□□ 2.39
TRAF3IP1-203ENST00000409739 SNRNP27Q8WVK2 155 aaKnown RBP29.99■■■□□ 2.39
TRAF3IP1-203ENST00000409739 SMPDL3AQ92484 453 aa29.99■■■□□ 2.39
TRAF3IP1-203ENST00000409739 RBBP8Q99708 897 aa29.99■■■□□ 2.39
TRAF3IP1-203ENST00000409739 MIPEPQ99797 713 aa29.99■■■□□ 2.39
TRAF3IP1-203ENST00000409739 SLC12A9Q9BXP2 914 aa29.99■■■□□ 2.39
TRAF3IP1-203ENST00000409739 INTS7Q9NVH2 962 aaKnown RBP29.99■■■□□ 2.39
TRAF3IP1-203ENST00000409739 TXNDC16Q9P2K2 825 aa29.99■■■□□ 2.39
TRAF3IP1-203ENST00000409739 PDE10AQ9Y233 779 aa29.99■■■□□ 2.39
TRAF3IP1-203ENST00000409739 LOC101059948A0A1B0GTJ6 334 aa29.98■■■□□ 2.39
TRAF3IP1-203ENST00000409739 ZNF839A8K0R7 811 aa29.98■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms