RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 KIAA1257Q9ULG3 409 aa5.36□□□□□ -1.55
CLK1-202ENST00000409403 FANCMQ8IYD8 2048 aa5.36□□□□□ -1.55
CLK1-202ENST00000409403 DOCK1Q14185 1865 aa5.36□□□□□ -1.55
CLK1-202ENST00000409403 LOC400499M0QZD8 3231 aa5.36□□□□□ -1.55
CLK1-202ENST00000409403 HECTD1Q9ULT8 2610 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 TCRBV9S1A1TA0A576 114 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 TCRBV3S1A0A5B6 114 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 HEATR9A2RTY3 570 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 CENPXA8MT69 81 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 KPNA7A9QM74 516 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 TCP10L2B9ZVM9 353 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 KBTBD13C9JR72 458 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 H7C0C1 242 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 ACOT8O14734 319 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 AIM2O14862 343 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 ARHGEF9O43307 516 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 PRICKLE3O43900 615 aaPredicted RBP5.35□□□□□ -1.55
CLK1-202ENST00000409403 RNASEH2AO75792 299 aaKnown RBP5.35□□□□□ -1.55
CLK1-202ENST00000409403 DDHD2O94830 711 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 CCNE2O96020 404 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 MT-ND5P03915 603 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 ANXA2P07355 339 aaKnown RBP5.35□□□□□ -1.55
CLK1-202ENST00000409403 CAPN1P07384 714 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 ATF7P17544 494 aaPredicted RBP5.35□□□□□ -1.55
CLK1-202ENST00000409403 PRKCHP24723 683 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 PIK3R1P27986 724 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 GSTM2P28161 218 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 GABRB3P28472 473 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 RBL1P28749 1068 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 ARL1P40616 181 aaPredicted RBP5.35□□□□□ -1.55
CLK1-202ENST00000409403 NSFP46459 744 aaKnown RBP5.35□□□□□ -1.55
CLK1-202ENST00000409403 HARS2P49590 506 aaKnown RBP5.35□□□□□ -1.55
CLK1-202ENST00000409403 BLVRAP53004 296 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 PPP5CP53041 499 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 PTTG1IPP53801 180 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 GABARAPL2P60520 117 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 DSTNP60981 165 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 ABCE1P61221 599 aaKnown RBP5.35□□□□□ -1.55
CLK1-202ENST00000409403 B2MP61769 119 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 OLR1P78380 273 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 ZXDAP98168 799 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 PIGFQ07326 219 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 PPIGQ13427 754 aaKnown RBP eCLIP5.35□□□□□ -1.551e-9■□□□□ 9.8
CLK1-202ENST00000409403 BFSP2Q13515 415 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 FAM110CQ1W6H9 321 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 KRTAP19-4Q3LI73 84 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 SLC36A3Q495N2 470 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 C15orf52Q6ZUT6 534 aaKnown RBP5.35□□□□□ -1.55
CLK1-202ENST00000409403 HTR3DQ70Z44 454 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 PPP1R32Q7Z5V6 425 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 ADCK1Q86TW2 530 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 CAND1Q86VP6 1230 aaKnown RBP5.35□□□□□ -1.55
CLK1-202ENST00000409403 SLC22A16Q86VW1 577 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 SNX32Q86XE0 403 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 SLC38A6Q8IZM9 456 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 NDUFAF2Q8N183 169 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 DCLK2Q8N568 766 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 CERS5Q8N5B7 392 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 DHRSXQ8N5I4 330 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 SLC44A5Q8NCS7 719 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 FAM46DQ8NEK8 389 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 DNERQ8NFT8 737 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 PHF10Q8WUB8 498 aaKnown RBP5.35□□□□□ -1.55
CLK1-202ENST00000409403 SHC3Q92529 594 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 ZUFSPQ96AP4 578 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 FAM89AQ96GI7 184 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 BTN2A3PQ96KV6 586 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 CEP170P1Q96L14 293 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 ZNF560Q96MR9 790 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 GLT1D1Q96MS3 346 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 PCDHB18PQ96TA0 734 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 MNTQ99583 582 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 SENP7Q9BQF6 1050 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 SPATA5L1Q9BVQ7 753 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 HEMGNQ9BXL5 484 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 GPR87Q9BY21 358 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 EPS8L2Q9H6S3 715 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 ATP13A3Q9H7F0 1226 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 TM9SF3Q9HD45 589 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 NECTIN3Q9NQS3 549 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 DDX28Q9NUL7 540 aaKnown RBP5.35□□□□□ -1.55
CLK1-202ENST00000409403 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.35□□□□□ -1.55
CLK1-202ENST00000409403 TXNDC16Q9P2K2 825 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 DCDC2Q9UHG0 476 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 STOML2Q9UJZ1 356 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 DNPEPQ9ULA0 475 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 CDYLQ9Y232 598 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 GRIP1Q9Y3R0 1128 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 TCAF1Q9Y4C2 921 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 PCDHGB2Q9Y5G2 931 aa5.35□□□□□ -1.55
CLK1-202ENST00000409403 DOPEY1Q5JWR5 2465 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 SCN5AQ14524 2016 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 ARPC4-TTLL3A0A0A6YYG9 625 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 LOC100653049A0A140TA62 436 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 A0A1B0GTW7 788 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 MAGEB16A2A368 324 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 GOLGA8IPA6NC78 632 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 TMEM233B4DJY2 109 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 H0YAE9 185 aa5.34□□□□□ -1.55
CLK1-202ENST00000409403 M0R3G1 203 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms